Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G635.26 Capsicum annuum HOM05D005942 ORTHO05D007209 4.0e-114 414.8 217 100.0
CAN.G790.55 Capsicum annuum HOM05D005942 ORTHO05D007209 7.0e-79 297.7 182 86.3
PGSC0003DMG400009149 Solanum tuberosum HOM05D005942 ORTHO05D007209 3.9e-77 292.0 170 90.0
Sopen03g041410 Solanum pennellii HOM05D005942 ORTHO05D007209 2.5e-76 289.3 170 89.4
Solyc03g123640.3 Solanum lycopersicum HOM05D005942 ORTHO05D007209 2.8e-75 285.8 170 88.8
Nitab4.5_0006338g0060 Nicotiana tabacum HOM05D005942 ORTHO05D007209 1.9e-71 273.1 180 80.0
Nitab4.5_0001873g0040 Nicotiana tabacum HOM05D005942 ORTHO05D007209 1.9e-68 263.1 180 77.8
CAN.G635.25 Capsicum annuum HOM05D005942 ORTHO05D007209 3.6e-67 258.8 154 87.0
Peaxi162Scf00038g02336 Petunia axillaris HOM05D005942 ORTHO05D007209 1.5e-65 253.4 180 75.6
Nitab4.5_0001873g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 1.2e-62 243.8 174 74.7
Cc04_g00670 Coffea canephora HOM05D005942 ORTHO05D007209 1.5e-44 183.7 168 56.5
CSS0026354 Camellia sinensis var. sinensis HOM05D005942 ORTHO05D007209 1.2e-41 174.1 174 56.9
MSTRG.10908 Avicennia marina HOM05D005942 ORTHO05D007209 2.0e-41 173.3 190 53.7
Lj9C538T8 Lonicera japonica HOM05D005942 ORTHO05D007209 2.0e-41 173.3 180 51.7
Dinv37817 Davidia involucrata HOM05D005942 ORTHO05D007209 9.9e-41 171.0 207 48.8
Manes.04G151100 Manihot esculenta HOM05D005942 ORTHO05D007209 8.4e-40 167.9 226 46.0
Actinidia24424 Actinidia chinensis HOM05D005942 ORTHO05D007209 5.5e-39 165.2 179 52.5
Dinv20380 Davidia involucrata HOM05D005942 ORTHO05D007209 7.1e-39 164.9 180 52.8
Sabra03G0043700 Salix brachista HOM05D005942 ORTHO05D007209 7.1e-39 164.9 237 44.7
Rhsim08G0245000 Rhododendron simsii HOM05D005942 ORTHO05D007209 9.3e-39 164.5 209 46.4
Cpa.g.sc25.196 Carica papaya HOM05D005942 ORTHO05D007209 2.1e-38 163.3 172 54.7
SalBow7G4809 Salvia bowleyana HOM05D005942 ORTHO05D007209 6.0e-38 161.8 173 52.0
Hma1.2p1_0090F.1_g045800 Hydrangea macrophylla HOM05D005942 ORTHO05D007209 1.8e-37 160.2 197 45.7
TWI14G0802 Tripterygium wilfordii HOM05D005942 ORTHO05D007209 1.8e-37 160.2 177 50.8
TAR624G0006 Trochodendron aralioides HOM05D005942 ORTHO05D007209 1.8e-37 160.2 168 50.6
ECA234G0243 Erigeron canadensis HOM05D005942 ORTHO05D007209 2.3e-37 159.8 163 55.8
Potri.003G073000 Populus trichocarpa HOM05D005942 ORTHO05D007209 2.3e-37 159.8 238 45.4
SGA_v2.0_scaffold122G33306 Striga asiatica HOM05D005942 ORTHO05D007209 3.0e-37 159.5 184 49.5
Thecc.06G130500 Theobroma cacao HOM05D005942 ORTHO05D007209 1.1e-36 157.5 138 58.7
Haze_16138 Corylus avellana HOM05D005942 ORTHO05D007209 5.6e-36 155.2 208 45.7
GSVIVG01016664001 Vitis vinifera HOM05D005942 ORTHO05D007209 7.4e-36 154.8 174 47.7
TPR.G28866 Trifolium pratense HOM05D005942 ORTHO05D007209 1.3e-35 154.1 201 45.8
CiPaw.02G130800 Carya illinoinensis HOM05D005942 ORTHO05D007209 2.8e-35 152.9 202 46.0
Medtr7g117545 Medicago truncatula HOM05D005942 ORTHO05D007209 2.8e-35 152.9 165 52.7
unitig_62.g23675 Utricularia gibba HOM05D005942 ORTHO05D007209 2.8e-35 152.9 183 46.4
Cfa003459 Carpinus fangiana HOM05D005942 ORTHO05D007209 3.7e-35 152.5 208 45.2
DCAR_007660 Daucus carota HOM05D005942 ORTHO05D007209 8.1e-35 151.4 225 41.8
QL05p000862 Quercus lobata HOM05D005942 ORTHO05D007209 1.4e-34 150.6 179 48.0
QL05p001132 Quercus lobata HOM05D005942 ORTHO05D007209 1.4e-34 150.6 179 48.0
Psat6g168240 Pisum sativum HOM05D005942 ORTHO05D007209 6.9e-34 148.3 203 43.8
VMungo1309G0067 Vigna mungo HOM05D005942 ORTHO05D007209 6.9e-34 148.3 176 48.3
Ciclev10024928m.g Citrus clementina HOM05D005942 ORTHO05D007209 1.2e-33 147.5 179 46.9
Migut.I01134 Erythranthe guttata HOM05D005942 ORTHO05D007209 1.5e-33 147.1 184 45.7
Ca_07883_v3 Cicer arietinum L. HOM05D005942 ORTHO05D007209 2.0e-33 146.7 161 49.7
Nn3g21985 Nelumbo nucifera HOM05D005942 ORTHO05D007209 2.0e-33 146.7 195 46.2
Prupe.3G030900 Prunus persica HOM05D005942 ORTHO05D007209 2.0e-33 146.7 179 46.9
Atru.chr1.4156 Acer truncatum HOM05D005942 ORTHO05D007209 2.6e-33 146.4 166 53.6
Lj1g0014309 Lotus japonicus HOM05D005942 ORTHO05D007209 2.6e-33 146.4 166 47.0
CsaV3_7G033920 Cucumis sativus L. HOM05D005942 ORTHO05D007209 4.5e-33 145.6 163 50.3
Phvul.009G261600 Phaseolus vulgaris HOM05D005942 ORTHO05D007209 4.5e-33 145.6 156 47.4
MBI13_g01657_MAGBIO Magnolia biondii HOM05D005942 ORTHO05D007209 7.6e-33 144.8 150 57.3
Duzib192G0321 Durio zibethinus HOM05D005942 ORTHO05D007209 1.3e-32 144.1 129 59.7
Sed0028190 Sechium edule HOM05D005942 ORTHO05D007209 2.9e-32 142.9 198 46.0
FAN02G3526 Fragaria x ananassa HOM05D005942 ORTHO05D007209 4.9e-32 142.1 198 43.9
Glyma.03G263200 Glycine max HOM05D005942 ORTHO05D007209 4.9e-32 142.1 170 49.4
HanXRQChr10g0311801 Helianthus annuus HOM05D005942 ORTHO05D007209 4.9e-32 142.1 162 51.2
Lalb_Chr15g0076691 Lupinus albus HOM05D005942 ORTHO05D007209 6.5e-32 141.7 156 51.3
PSO170G5566 Papaver somniferum HOM05D005942 ORTHO05D007209 6.5e-32 141.7 172 49.4
FvH4_6g35860 Fragaria vesca HOM05D005942 ORTHO05D007209 1.1e-31 141.0 198 43.4
FAN09G3780 Fragaria x ananassa HOM05D005942 ORTHO05D007209 1.1e-31 141.0 198 43.4
Thhalv10018182m.g Eutrema salsugineum HOM05D005942 ORTHO05D007209 1.4e-31 140.6 211 42.7
FAN05G1996 Fragaria x ananassa HOM05D005942 ORTHO05D007209 1.9e-31 140.2 200 44.0
Gohir.A05G141800 Gossypium hirsutum HOM05D005942 ORTHO05D007209 2.5e-31 139.8 156 48.1
Lsat_1_v5_gn_5_137681 Lactuca sativa HOM05D005942 ORTHO05D007209 2.5e-31 139.8 213 40.8
Aa31LG4G2680 Aethionema arabicum HOM05D005942 ORTHO05D007209 3.2e-31 139.4 205 42.4
PGR102G3180 Punica granatum HOM05D005942 ORTHO05D007209 3.2e-31 139.4 181 47.0
ClCG09G001410 Citrullus lanatus HOM05D005942 ORTHO05D007209 4.2e-31 139.0 163 48.5
Gohir.D05G144100 Gossypium hirsutum HOM05D005942 ORTHO05D007209 4.2e-31 139.0 156 48.1
Gorai.009G148000 Gossypium raimondii HOM05D005942 ORTHO05D007209 4.2e-31 139.0 156 48.1
THA.LOC104813965 Tarenaya hassleriana HOM05D005942 ORTHO05D007209 4.2e-31 139.0 167 49.1
FAN14G4637 Fragaria x ananassa HOM05D005942 ORTHO05D007209 5.5e-31 138.7 198 42.9
RcHm_v2.0_Chr2g0147901 Rosa chinensis HOM05D005942 ORTHO05D007209 5.5e-31 138.7 199 43.2
Aqoxy7G00926 Aquilegia oxysepala HOM05D005942 ORTHO05D007209 9.3e-31 137.9 205 41.0
Carub.0002s1918 Capsella rubella HOM05D005942 ORTHO05D007209 9.3e-31 137.9 178 46.1
MELO3C024305.2 Cucumis melo HOM05D005942 ORTHO05D007209 1.6e-30 137.1 163 47.9
MD09G1172500 Malus domestica HOM05D005942 ORTHO05D007209 2.1e-30 136.7 211 39.8
CANSAT56G3801 Cannabis sativa HOM05D005942 ORTHO05D007209 4.6e-30 135.6 168 44.6
arahy.Tifrunner.gnm1.ann1.SXV5N5 Arachis hypogaea HOM05D005942 ORTHO05D007209 6.0e-30 135.2 153 49.0
arahy.Tifrunner.gnm1.ann1.UMP4HF Arachis hypogaea HOM05D005942 ORTHO05D007209 6.0e-30 135.2 153 49.0
PSO017G1617 Papaver somniferum HOM05D005942 ORTHO05D007209 6.0e-30 135.2 213 42.3
AT1G72320 Arabidopsis thaliana HOM05D005942 ORTHO05D007209 2.3e-29 133.3 175 45.7
AUR62025613 Chenopodium quinoa HOM05D005942 ORTHO05D007209 2.3e-29 133.3 182 44.0
AUR62043501 Chenopodium quinoa HOM05D005942 ORTHO05D007209 2.3e-29 133.3 135 51.1
Sp5g27400 Schrenkiella parvula HOM05D005942 ORTHO05D007209 2.3e-29 133.3 211 41.7
AL2G32000 Arabidopsis lyrata HOM05D005942 ORTHO05D007209 3.9e-29 132.5 178 44.9
AUR62001402 Chenopodium quinoa HOM05D005942 ORTHO05D007209 3.9e-29 132.5 182 44.0
Hund18636 Selenicereus undatus HOM05D005942 ORTHO05D007209 3.9e-29 132.5 194 43.3
COL.COLO4_30871 Corchorus olitorius HOM05D005942 ORTHO05D007209 5.1e-29 132.1 195 40.0
BcaC08g46688 Brassica carinata HOM05D005942 ORTHO05D007209 1.5e-28 130.6 173 45.1
C06p46680 Brassica napus HOM05D005942 ORTHO05D007209 1.5e-28 130.6 173 45.1
BolC6t39713H Brassica oleracea HOM05D005942 ORTHO05D007209 1.5e-28 130.6 173 45.1
CARHR065220 Cardamine hirsuta HOM05D005942 ORTHO05D007209 9.6e-28 127.9 182 43.4
A07p38500 Brassica napus HOM05D005942 ORTHO05D007209 2.1e-27 126.7 181 43.1
BcaB03g14980 Brassica carinata HOM05D005942 ORTHO05D007209 6.3e-27 125.2 208 41.8
Eucgr.J02595 Eucalyptus grandis HOM05D005942 ORTHO05D007209 8.2e-27 124.8 208 40.9
HPP92_016652 Vanilla planifolia HOM05D005942 ORTHO05D007209 4.1e-26 122.5 108 57.4
Sabra01G0130200 Salix brachista HOM05D005942 ORTHO05D007209 9.0e-26 121.3 127 53.5
BraA07t31410Z Brassica rapa HOM05D005942 ORTHO05D007209 2.0e-25 120.2 181 41.4
CDE04G3550 Ceratophyllum demersum HOM05D005942 ORTHO05D007209 2.0e-25 120.2 134 49.3
EL10Ac7g16496 Beta vulgaris HOM05D005942 ORTHO05D007209 7.6e-25 118.2 211 39.8
Nitab4.5_0007678g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 1.3e-24 117.5 163 47.2
Ah.15g094920 Amaranthus hybridus HOM05D005942 ORTHO05D007209 1.4e-23 114.0 186 38.2
Sc12g0011030 Simmondsia chinensis HOM05D005942 ORTHO05D007209 1.9e-23 113.6 179 42.5
HPP92_016647 Vanilla planifolia HOM05D005942 ORTHO05D007209 1.2e-22 110.9 169 42.0
Oeu019509.2 Olea europaea HOM05D005942 ORTHO05D007209 2.7e-22 109.8 74 67.6
Zm00001eb028000 Zea mays HOM05D005942 ORTHO05D007209 1.3e-21 107.5 129 41.1
ATR0099G013 Amborella trichopoda HOM05D005942 ORTHO05D007209 3.9e-21 105.9 183 38.8
vmacro18719 Vaccinium macrocarpon HOM05D005942 ORTHO05D007209 2.4e-18 96.7 87 57.5
SEGI_33476 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 9.1e-18 94.7 183 36.6
Mapoly0020s0016 Marchantia polymorpha HOM05D005942 ORTHO05D007209 2.0e-17 93.6 91 42.9
Glyma.19G262250 Glycine max HOM05D005942 ORTHO05D007209 6.5e-16 88.6 124 46.0
Pp3c10_6430 Physcomitrium patens HOM05D005942 ORTHO05D007209 6.5e-16 88.6 110 36.4
SGA_v2.0_scaffold253G45152 Striga asiatica HOM05D005942 ORTHO05D007209 2.7e-14 83.2 160 38.1
AagrBONN_evm.TU.Sc2ySwM_369.233 Anthoceros agrestis HOM05D005942 ORTHO05D007209 5.7e-12 75.5 160 31.2
SMO118G0133 Selaginella moellendorffii HOM05D005942 ORTHO05D007209 6.3e-11 72.0 88 35.2
CBR_g4864 Chara braunii HOM05D005942 ORTHO05D007209 6.9e-10 68.6 88 37.5
Haze_02542 Corylus avellana HOM05D005942 ORTHO05D007209 7.7e-09 65.1 90 47.8
Cre16.g649600 Chlamydomonas reinhardtii HOM05D005942 ORTHO05D007209 1.1e-07 61.2 101 30.7
BolC2t09032H Brassica oleracea HOM05D005942 ORTHO05D007209 1.2e-06 57.8 92 39.1
MCO05G275 Micromonas commoda HOM05D005942 ORTHO05D007209 2.1e-06 57.0 119 27.7
C02p29840 Brassica napus HOM05D005942 ORTHO05D007209 2.7e-06 56.6 58 46.6


User provided reference genes

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