Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G628.77 Capsicum annuum HOM05D005614 ORTHO05D006759 6.1e-163 577.4 287 100.0
PGSC0003DMG400026996 Solanum tuberosum HOM05D005614 ORTHO05D006759 5.5e-156 554.3 286 95.8
Solyc06g071450.4 Solanum lycopersicum HOM05D005614 ORTHO05D006759 1.2e-155 553.1 286 95.5
Sopen06g027730 Solanum pennellii HOM05D005614 ORTHO05D006759 1.8e-154 549.3 286 94.8
Nitab4.5_0000866g0090 Nicotiana tabacum HOM05D005614 ORTHO05D006759 3.2e-148 528.5 306 88.2
Nitab4.5_0001017g0060 Nicotiana tabacum HOM05D005614 ORTHO05D006759 3.6e-139 498.4 288 87.5
Migut.D01926 Erythranthe guttata HOM05D005614 ORTHO05D006759 2.7e-134 482.3 282 84.8
Dinv07241 Davidia involucrata HOM05D005614 ORTHO05D006759 4.5e-134 481.5 289 82.4
Actinidia03480 Actinidia chinensis HOM05D005614 ORTHO05D006759 4.7e-131 471.5 286 81.1
SalBow3G0912 Salvia bowleyana HOM05D005614 ORTHO05D006759 8.0e-131 470.7 288 81.9
CSS0036035 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 2.3e-130 469.2 287 80.8
Cc04_g13870 Coffea canephora HOM05D005614 ORTHO05D006759 7.5e-129 464.2 286 81.5
RhsimUnG0093400 Rhododendron simsii HOM05D005614 ORTHO05D006759 3.7e-128 461.8 289 78.9
Oeu024691.1 Olea europaea HOM05D005614 ORTHO05D006759 4.1e-127 458.4 272 81.6
CSS0020697 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 9.2e-127 457.2 288 79.5
Sc01g0001200 Simmondsia chinensis HOM05D005614 ORTHO05D006759 1.7e-125 453.0 306 75.5
HanXRQChr16g0532671 Helianthus annuus HOM05D005614 ORTHO05D006759 8.6e-125 450.7 286 79.0
ECA246G0276 Erigeron canadensis HOM05D005614 ORTHO05D006759 1.5e-124 449.9 287 78.7
HanXRQChr02g0053121 Helianthus annuus HOM05D005614 ORTHO05D006759 9.5e-124 447.2 287 77.7
Rhsim11G0047100 Rhododendron simsii HOM05D005614 ORTHO05D006759 1.1e-122 443.7 274 79.9
GSVIVG01008884001 Vitis vinifera HOM05D005614 ORTHO05D006759 1.1e-122 443.7 296 76.0
DCAR_017415 Daucus carota HOM05D005614 ORTHO05D006759 3.4e-121 438.7 274 79.6
TAR628G1424 Trochodendron aralioides HOM05D005614 ORTHO05D006759 8.3e-120 434.1 295 74.2
MD15G1351400 Malus domestica HOM05D005614 ORTHO05D006759 1.1e-119 433.7 296 74.7
CANSAT54G1242 Cannabis sativa HOM05D005614 ORTHO05D006759 5.4e-119 431.4 288 76.4
Potri.005G176600 Populus trichocarpa HOM05D005614 ORTHO05D006759 9.2e-119 430.6 296 72.6
Prupe.1G500100 Prunus persica HOM05D005614 ORTHO05D006759 7.8e-118 427.6 295 73.9
Cpa.g.sc36.54 Carica papaya HOM05D005614 ORTHO05D006759 1.7e-117 426.4 295 72.5
vmacro14329 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 1.7e-117 426.4 278 76.6
Gohir.A05G234600 Gossypium hirsutum HOM05D005614 ORTHO05D006759 2.3e-117 426.0 295 72.9
PSO782G2082 Papaver somniferum HOM05D005614 ORTHO05D006759 3.9e-117 425.2 297 71.7
RcHm_v2.0_Chr6g0295621 Rosa chinensis HOM05D005614 ORTHO05D006759 3.9e-117 425.2 295 72.2
TWI79G0333 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 3.9e-117 425.2 297 73.1
PSO170G2981 Papaver somniferum HOM05D005614 ORTHO05D006759 6.6e-117 424.5 297 71.0
PGR042G1492 Punica granatum HOM05D005614 ORTHO05D006759 1.1e-116 423.7 295 72.2
Thecc.08G123600 Theobroma cacao HOM05D005614 ORTHO05D006759 1.5e-116 423.3 295 72.2
THA.LOC104806819 Tarenaya hassleriana HOM05D005614 ORTHO05D006759 1.9e-116 422.9 296 71.6
FvH4_2g26720 Fragaria vesca HOM05D005614 ORTHO05D006759 2.5e-116 422.5 295 72.2
Atru.chr13.1437_Atru.chr13.1438 Acer truncatum HOM05D005614 ORTHO05D006759 1.2e-115 420.2 295 71.2
Gorai.009G245300 Gossypium raimondii HOM05D005614 ORTHO05D006759 1.6e-115 419.9 295 72.5
CARHR138110 Cardamine hirsuta HOM05D005614 ORTHO05D006759 3.6e-115 418.7 298 71.5
Ciclev10002002m.g Citrus clementina HOM05D005614 ORTHO05D006759 4.7e-115 418.3 297 70.7
Aa31LG6G9300 Aethionema arabicum HOM05D005614 ORTHO05D006759 8.1e-115 417.5 295 71.2
Sp1g16310 Schrenkiella parvula HOM05D005614 ORTHO05D006759 1.1e-114 417.2 298 70.8
Aqoxy7G02121 Aquilegia oxysepala HOM05D005614 ORTHO05D006759 1.4e-114 416.8 299 71.2
Thhalv10008316m.g Eutrema salsugineum HOM05D005614 ORTHO05D006759 1.4e-114 416.8 298 71.1
BcaB07g31845 Brassica carinata HOM05D005614 ORTHO05D006759 1.8e-114 416.4 299 71.2
CiPaw.05G223000 Carya illinoinensis HOM05D005614 ORTHO05D006759 1.8e-114 416.4 292 72.6
QL09p035347 Quercus lobata HOM05D005614 ORTHO05D006759 2.3e-114 416.0 298 72.8
BcaB03g12976 Brassica carinata HOM05D005614 ORTHO05D006759 4.0e-114 415.2 300 70.7
AT1G18340 Arabidopsis thaliana HOM05D005614 ORTHO05D006759 1.5e-113 413.3 300 71.7
AL1G30720 Arabidopsis lyrata HOM05D005614 ORTHO05D006759 3.4e-113 412.1 300 72.0
CARHR018930 Cardamine hirsuta HOM05D005614 ORTHO05D006759 5.8e-113 411.4 296 72.0
BolC8t49486H Brassica oleracea HOM05D005614 ORTHO05D006759 1.7e-112 409.8 294 70.4
Carub.0001s1797 Capsella rubella HOM05D005614 ORTHO05D006759 1.7e-112 409.8 300 70.3
BraA06t24565Z Brassica rapa HOM05D005614 ORTHO05D006759 6.4e-112 407.9 299 69.6
C05p16610 Brassica napus HOM05D005614 ORTHO05D006759 3.2e-111 405.6 298 69.1
A06p14370 Brassica napus HOM05D005614 ORTHO05D006759 5.4e-111 404.8 299 69.6
Sed0025863 Sechium edule HOM05D005614 ORTHO05D006759 1.6e-110 403.3 295 70.5
BolC5t30360H Brassica oleracea HOM05D005614 ORTHO05D006759 2.7e-110 402.5 298 68.8
BcaC05g25728 Brassica carinata HOM05D005614 ORTHO05D006759 3.5e-110 402.1 300 68.3
C08p18540 Brassica napus HOM05D005614 ORTHO05D006759 1.0e-109 400.6 285 71.2
A08p30430 Brassica napus HOM05D005614 ORTHO05D006759 5.1e-109 398.3 285 70.2
BraA08t34975Z Brassica rapa HOM05D005614 ORTHO05D006759 6.6e-109 397.9 295 68.5
CsaV3_2G009350 Cucumis sativus L. HOM05D005614 ORTHO05D006759 1.5e-108 396.7 277 73.3
FAN15G2492 Fragaria x ananassa HOM05D005614 ORTHO05D006759 3.3e-108 395.6 316 65.8
FAN20G0890 Fragaria x ananassa HOM05D005614 ORTHO05D006759 3.6e-107 392.1 275 72.4
SalBow7G1071 Salvia bowleyana HOM05D005614 ORTHO05D006759 6.2e-107 391.3 238 83.6
FAN27G1664 Fragaria x ananassa HOM05D005614 ORTHO05D006759 4.0e-106 388.7 316 64.9
Lj1g0021555 Lotus japonicus HOM05D005614 ORTHO05D006759 5.2e-106 388.3 296 67.6
ClCG08G005590 Citrullus lanatus HOM05D005614 ORTHO05D006759 6.8e-106 387.9 332 63.9
Ca_15193_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 4.4e-105 385.2 296 66.2
arahy.Tifrunner.gnm1.ann1.2VS3GS Arachis hypogaea HOM05D005614 ORTHO05D006759 1.3e-104 383.6 299 67.2
arahy.Tifrunner.gnm1.ann1.MKV7IN Arachis hypogaea HOM05D005614 ORTHO05D006759 2.9e-104 382.5 299 67.2
Sed0022578 Sechium edule HOM05D005614 ORTHO05D006759 8.4e-104 380.9 307 66.1
HPP92_013333 Vanilla planifolia HOM05D005614 ORTHO05D006759 8.4e-104 380.9 301 63.1
Lalb_Chr23g0270981 Lupinus albus HOM05D005614 ORTHO05D006759 1.1e-103 380.6 297 66.7
Medtr3g072430 Medicago truncatula HOM05D005614 ORTHO05D006759 5.4e-103 378.3 295 66.1
Lsat_1_v5_gn_3_69700 Lactuca sativa HOM05D005614 ORTHO05D006759 1.2e-102 377.1 235 81.7
Glyma.06G112400 Glycine max HOM05D005614 ORTHO05D006759 4.6e-102 375.2 297 66.3
Nitab4.5_0000003g0570 Nicotiana tabacum HOM05D005614 ORTHO05D006759 6.0e-102 374.8 230 85.2
Glyma.04G250400 Glycine max HOM05D005614 ORTHO05D006759 1.0e-101 374.0 297 66.7
Phvul.009G124300 Phaseolus vulgaris HOM05D005614 ORTHO05D006759 1.0e-101 374.0 295 65.8
COL.COLO4_35944 Corchorus olitorius HOM05D005614 ORTHO05D006759 8.7e-101 370.9 251 74.1
ATR0684G165 Amborella trichopoda HOM05D005614 ORTHO05D006759 1.9e-100 369.8 278 67.6
Os02g0125800 Oryza sativa ssp. japonica HOM05D005614 ORTHO05D006759 3.3e-100 369.0 292 64.0
Duzib041G0760 Durio zibethinus HOM05D005614 ORTHO05D006759 3.4e-97 359.0 295 64.4
EL10Ac1g01047 Beta vulgaris HOM05D005614 ORTHO05D006759 4.4e-97 358.6 252 71.8
Hund27024 Selenicereus undatus HOM05D005614 ORTHO05D006759 4.4e-97 358.6 249 73.5
AUR62027890 Chenopodium quinoa HOM05D005614 ORTHO05D006759 2.9e-96 355.9 252 71.8
Ah.05g170870 Amaranthus hybridus HOM05D005614 ORTHO05D006759 3.2e-95 352.4 248 72.6
Peaxi162Scf00689g00225 Petunia axillaris HOM05D005614 ORTHO05D006759 7.1e-95 351.3 212 86.3
Zm00001eb208710 Zea mays HOM05D005614 ORTHO05D006759 1.2e-94 350.5 299 60.2
Manes.02G162200 Manihot esculenta HOM05D005614 ORTHO05D006759 2.1e-91 339.7 245 71.4
Mapoly0044s0012 Marchantia polymorpha HOM05D005614 ORTHO05D006759 7.6e-89 331.3 291 54.3
SGA_v2.0_scaffold31G12915 Striga asiatica HOM05D005614 ORTHO05D006759 1.9e-87 326.6 209 80.4
Pp3c2_3680 Physcomitrium patens HOM05D005614 ORTHO05D006759 3.5e-86 322.4 288 55.6
Duzib093G1836 Durio zibethinus HOM05D005614 ORTHO05D006759 1.8e-85 320.1 322 56.5
Gohir.D05G236900 Gossypium hirsutum HOM05D005614 ORTHO05D006759 2.3e-85 319.7 199 77.9
MELO3C008774.2 Cucumis melo HOM05D005614 ORTHO05D006759 4.5e-81 305.4 200 76.5
Nn8g39974 Nelumbo nucifera HOM05D005614 ORTHO05D006759 1.3e-80 303.9 228 68.4
BcaNung05442 Brassica carinata HOM05D005614 ORTHO05D006759 3.3e-76 289.3 221 67.0
Eucgr.G01112 Eucalyptus grandis HOM05D005614 ORTHO05D006759 3.3e-76 289.3 219 68.0
AUR62019050 Chenopodium quinoa HOM05D005614 ORTHO05D006759 7.4e-76 288.1 252 61.5
Oeu022164.1 Olea europaea HOM05D005614 ORTHO05D006759 2.5e-71 273.1 149 84.6
Sabra05G0133300 Salix brachista HOM05D005614 ORTHO05D006759 1.3e-67 260.8 291 51.9
vmacro00825 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 1.3e-67 260.8 230 63.5
FAN24G3468 Fragaria x ananassa HOM05D005614 ORTHO05D006759 8.2e-67 258.1 385 44.7
MBI03_g33030_MAGBIO Magnolia biondii HOM05D005614 ORTHO05D006759 2.4e-66 256.5 252 56.7
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 5.0e-64 248.8 315 43.5
CDE06G0499 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 1.1e-58 231.1 185 64.9
Haze_00457 Corylus avellana HOM05D005614 ORTHO05D006759 1.3e-56 224.2 182 64.8
TPR.G24041 Trifolium pratense HOM05D005614 ORTHO05D006759 1.7e-48 197.2 179 59.2
CDE12G0551 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 8.0e-46 188.3 128 70.3
TPR.G40310 Trifolium pratense HOM05D001808 ORTHO05D001747 1.4e-45 187.6 111 76.6
TWI75G0111 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 1.4e-45 187.6 204 53.9
Lj4A622G15 Lonicera japonica HOM05D005614 ORTHO05D006759 6.7e-45 185.3 95 92.6
Psat5g132400 Pisum sativum HOM05D005614 ORTHO05D006759 4.1e-42 176.0 120 68.3
Psat5g132360 Pisum sativum HOM05D005614 ORTHO05D006759 2.6e-41 173.3 165 57.0
SEGI_11087 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 2.5e-39 166.8 96 81.2
CAN.G964.16 Capsicum annuum HOM05D005614 ORTHO05D006759 4.2e-39 166.0 98 88.8
Cre03.g172050 Chlamydomonas reinhardtii HOM05D005614 ORTHO05D006759 1.2e-38 164.5 293 36.2
Lj4A622G16 Lonicera japonica HOM05D005614 ORTHO05D006759 3.4e-36 156.4 118 71.2
SEGI_10746 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 2.2e-32 143.7 154 50.0
Haze_00458 Corylus avellana HOM05D005614 ORTHO05D006759 2.7e-30 136.7 79 78.5
MCO01G384 Micromonas commoda HOM05D005614 ORTHO05D006759 1.0e-29 134.8 245 35.9
SMO358G0086 Selaginella moellendorffii HOM05D005614 ORTHO05D006759 6.3e-27 125.6 159 45.9
PRCOL_00005856 Prasinoderma coloniale HOM05D005614 ORTHO05D006759 7.7e-25 118.6 135 44.4
QL09p036498 Quercus lobata HOM05D005614 ORTHO05D006759 7.7e-25 118.6 70 82.9
Cfa025530 Carpinus fangiana HOM05D005614 ORTHO05D006759 1.0e-24 118.2 336 27.7
RhsimUnG0102200 Rhododendron simsii HOM05D005614 ORTHO05D006759 3.5e-17 93.2 82 59.8
Rhsim02G0185400 Rhododendron simsii HOM05D005614 ORTHO05D006759 9.5e-15 85.1 79 60.8
SalBow3G3353 Salvia bowleyana HOM05D005614 ORTHO05D006759 1.5e-12 77.8 65 64.6
Ca_31116_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 3.4e-12 76.6 93 52.7
TPR.G32 Trifolium pratense HOM05D005614 ORTHO05D006759 2.4e-10 70.5 31 87.1
CAN.G1086.2 Capsicum annuum HOM05D003813 ORTHO05D004557 4.1e-10 69.7 42 85.7
Rhsim03G0117800 Rhododendron simsii HOM05D005614 ORTHO05D006759 1.6e-09 67.8 99 43.4


User provided reference genes

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