Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G462.4 Capsicum annuum HOM05D004093 ORTHO05D004981 2.1e-118 429.1 226 100.0
CAN.G606.83 Capsicum annuum HOM05D004093 ORTHO05D004981 5.8e-100 367.9 213 93.9
Sopen01g049060 Solanum pennellii HOM05D004093 ORTHO05D004981 5.8e-76 288.1 214 74.3
Solyc01g106740.4 Solanum lycopersicum HOM05D004093 ORTHO05D004981 9.9e-76 287.3 214 74.3
Nitab4.5_0000772g0040 Nicotiana tabacum HOM05D004093 ORTHO05D004981 8.4e-67 257.7 219 68.9
Nitab4.5_0010657g0010 Nicotiana tabacum HOM05D004093 ORTHO05D004981 4.6e-65 251.9 217 67.7
CSS0016143 Camellia sinensis var. sinensis HOM05D004093 ORTHO05D004981 8.4e-59 231.1 214 58.4
CSS0001341 Camellia sinensis var. sinensis HOM05D004093 ORTHO05D004981 4.2e-58 228.8 212 59.0
Dinv09528 Davidia involucrata HOM05D004093 ORTHO05D004981 5.5e-58 228.4 215 60.0
Lalb_Chr16g0387791 Lupinus albus HOM05D004093 ORTHO05D004981 1.2e-57 227.3 219 59.4
Rhsim11G0149600 Rhododendron simsii HOM05D004093 ORTHO05D004981 1.3e-56 223.8 214 58.4
Dinv16064 Davidia involucrata HOM05D004093 ORTHO05D004981 3.0e-56 222.6 214 58.4
vmacro01935 Vaccinium macrocarpon HOM05D004093 ORTHO05D004981 3.0e-56 222.6 218 57.3
Migut.N01121 Erythranthe guttata HOM05D004093 ORTHO05D004981 1.5e-55 220.3 215 57.7
GSVIVG01037036001 Vitis vinifera HOM05D004093 ORTHO05D004981 2.5e-55 219.5 214 57.9
Cfa004713 Carpinus fangiana HOM05D004093 ORTHO05D004981 4.3e-55 218.8 223 62.8
SGA_v2.0_scaffold219G42544 Striga asiatica HOM05D004093 ORTHO05D004981 1.6e-54 216.9 215 57.7
Cc02_g20210 Coffea canephora HOM05D004093 ORTHO05D004981 2.1e-54 216.5 217 58.5
vmacro20830 Vaccinium macrocarpon HOM05D004093 ORTHO05D004981 2.1e-54 216.5 219 56.6
Lj5C222T15 Lonicera japonica HOM05D004093 ORTHO05D004981 2.8e-54 216.1 216 63.9
PGR119G0904 Punica granatum HOM05D004093 ORTHO05D004981 4.8e-54 215.3 214 58.4
CiPaw.05G021800 Carya illinoinensis HOM05D004093 ORTHO05D004981 8.2e-54 214.5 212 57.5
Nn6g32059 Nelumbo nucifera HOM05D004093 ORTHO05D004981 8.2e-54 214.5 214 56.1
Peaxi162Scf00016g03248 Petunia axillaris HOM05D004093 ORTHO05D004981 1.1e-53 214.2 212 58.5
Lsat_1_v5_gn_9_113901 Lactuca sativa HOM05D004093 ORTHO05D004981 1.4e-53 213.8 214 56.5
DCAR_021934 Daucus carota HOM05D004093 ORTHO05D004981 1.8e-53 213.4 213 56.3
MD10G1112200 Malus domestica HOM05D004093 ORTHO05D004981 1.8e-53 213.4 215 62.8
MSTRG.27768 Avicennia marina HOM05D004093 ORTHO05D004981 3.1e-53 212.6 214 56.1
Prupe.8G151800 Prunus persica HOM05D004093 ORTHO05D004981 4.1e-53 212.2 214 62.1
Glyma.08G043900 Glycine max HOM05D004093 ORTHO05D004981 6.9e-53 211.5 213 55.9
TWI14G0771 Tripterygium wilfordii HOM05D004093 ORTHO05D004981 6.9e-53 211.5 148 72.3
Actinidia04397 Actinidia chinensis HOM05D004093 ORTHO05D004981 9.0e-53 211.1 212 54.7
ClCG10G009970 Citrullus lanatus HOM05D004093 ORTHO05D004981 2.0e-52 209.9 213 54.5
TAR381G0275 Trochodendron aralioides HOM05D004093 ORTHO05D004981 2.6e-52 209.5 222 55.9
Phvul.002G318600 Phaseolus vulgaris HOM05D004093 ORTHO05D004981 5.8e-52 208.4 213 54.5
Atru.chr5.2252 Acer truncatum HOM05D004093 ORTHO05D004981 1.0e-51 207.6 214 56.5
Aqoxy2G01432 Aquilegia oxysepala HOM05D004093 ORTHO05D004981 1.0e-51 207.6 214 55.1
TPR.G32673 Trifolium pratense HOM05D004093 ORTHO05D004981 1.0e-51 207.6 220 54.5
VMungo0251G2341 Vigna mungo HOM05D004093 ORTHO05D004981 2.2e-51 206.5 213 53.5
CsaV3_4G000020 Cucumis sativus L. HOM05D004093 ORTHO05D004981 3.8e-51 205.7 210 54.8
Ca_17297_v3 Cicer arietinum L. HOM05D004093 ORTHO05D004981 6.5e-51 204.9 221 55.2
Ca_17304_v3 Cicer arietinum L. HOM05D004093 ORTHO05D004981 6.5e-51 204.9 221 55.2
Potri.001G289001 Populus trichocarpa HOM05D004093 ORTHO05D004981 6.5e-51 204.9 213 57.7
RcHm_v2.0_Chr6g0247831 Rosa chinensis HOM05D004093 ORTHO05D004981 6.5e-51 204.9 222 53.2
Thecc.02G031600 Theobroma cacao HOM05D004093 ORTHO05D004981 6.5e-51 204.9 149 69.1
Glyma.05G236700 Glycine max HOM05D004093 ORTHO05D004981 8.4e-51 204.5 223 52.9
Ciclev10028050m.g Citrus clementina HOM05D004093 ORTHO05D004981 1.1e-50 204.1 145 71.7
CiPaw.06G163100 Carya illinoinensis HOM05D004093 ORTHO05D004981 1.9e-50 203.4 216 55.6
QL11p028820 Quercus lobata HOM05D004093 ORTHO05D004981 1.9e-50 203.4 138 72.5
Sc20g0001830 Simmondsia chinensis HOM05D004093 ORTHO05D004981 3.2e-50 202.6 221 52.5
Ah.05g177500 Amaranthus hybridus HOM05D004093 ORTHO05D004981 9.3e-50 201.1 226 53.1
TWI59G0012 Tripterygium wilfordii HOM05D004093 ORTHO05D004981 1.2e-49 200.7 145 69.7
arahy.Tifrunner.gnm1.ann1.14EEYB Arachis hypogaea HOM05D004093 ORTHO05D004981 6.1e-49 198.4 140 71.4
arahy.Tifrunner.gnm1.ann1.K8EMZF Arachis hypogaea HOM05D004093 ORTHO05D004981 6.1e-49 198.4 140 71.4
AUR62023346 Chenopodium quinoa HOM05D004093 ORTHO05D004981 6.1e-49 198.4 222 52.3
COL.COLO4_17799 Corchorus olitorius HOM05D004093 ORTHO05D004981 6.1e-49 198.4 217 50.7
Sed0024148 Sechium edule HOM05D004093 ORTHO05D004981 7.9e-49 198.0 142 68.3
Thhalv10024609m.g Eutrema salsugineum HOM05D004093 ORTHO05D004981 1.3e-48 197.2 148 66.9
Medtr4g120810 Medicago truncatula HOM05D004093 ORTHO05D004981 1.8e-48 196.8 139 68.3
Gohir.D01G172000 Gossypium hirsutum HOM05D004093 ORTHO05D004981 2.3e-48 196.4 214 53.3
Gorai.002G213600 Gossypium raimondii HOM05D004093 ORTHO05D004981 2.3e-48 196.4 214 53.3
unitig_62.g23638 Utricularia gibba HOM05D004093 ORTHO05D004981 2.3e-48 196.4 149 66.4
AUR62013810 Chenopodium quinoa HOM05D004093 ORTHO05D004981 3.0e-48 196.1 229 48.9
FAN15G0664 Fragaria x ananassa HOM05D004093 ORTHO05D004981 3.0e-48 196.1 148 68.9
FAN27G3135 Fragaria x ananassa HOM05D004093 ORTHO05D004981 3.0e-48 196.1 213 58.2
PSO447G0184 Papaver somniferum HOM05D004093 ORTHO05D004981 3.0e-48 196.1 214 51.4
Potri.009G084300 Populus trichocarpa HOM05D004093 ORTHO05D004981 3.0e-48 196.1 214 55.6
Medtr8g104740 Medicago truncatula HOM05D004093 ORTHO05D004981 3.9e-48 195.7 139 67.6
THA.LOC104807205 Tarenaya hassleriana HOM05D004093 ORTHO05D004981 3.9e-48 195.7 148 67.6
Eucgr.I02505 Eucalyptus grandis HOM05D004093 ORTHO05D004981 6.7e-48 194.9 216 52.8
Gohir.A01G180900 Gossypium hirsutum HOM05D004093 ORTHO05D004981 6.7e-48 194.9 219 51.1
PSO210G2081 Papaver somniferum HOM05D004093 ORTHO05D004981 6.7e-48 194.9 215 52.1
ATR0767G039 Amborella trichopoda HOM05D004093 ORTHO05D004981 8.7e-48 194.5 212 51.4
AT4G33760 Arabidopsis thaliana HOM05D004093 ORTHO05D004981 8.7e-48 194.5 149 64.4
FAN24G1787 Fragaria x ananassa HOM05D004093 ORTHO05D004981 8.7e-48 194.5 148 68.9
ECA233G6085 Erigeron canadensis HOM05D004093 ORTHO05D004981 1.1e-47 194.1 216 52.3
ECA233G4634 Erigeron canadensis HOM05D004093 ORTHO05D004981 1.5e-47 193.7 216 52.3
Oeu037299.1 Olea europaea HOM05D004093 ORTHO05D004981 1.5e-47 193.7 226 51.3
Carub.0007s0667 Capsella rubella HOM05D004093 ORTHO05D004981 2.5e-47 193.0 153 61.4
HanXRQChr03g0069101 Helianthus annuus HOM05D004093 ORTHO05D004981 2.5e-47 193.0 228 50.9
Phvul.011G054700 Phaseolus vulgaris HOM05D004093 ORTHO05D004981 2.5e-47 193.0 213 52.1
MBI16_g34665_MAGBIO Magnolia biondii HOM05D004093 ORTHO05D004981 3.3e-47 192.6 143 68.5
Sp7g31500 Schrenkiella parvula HOM05D004093 ORTHO05D004981 3.3e-47 192.6 148 64.2
HanXRQChr16g0510261 Helianthus annuus HOM05D004093 ORTHO05D004981 7.4e-47 191.4 140 66.4
Lj4g0018571 Lotus japonicus HOM05D004093 ORTHO05D004981 9.7e-47 191.0 241 49.4
BcaC01g00967 Brassica carinata HOM05D004093 ORTHO05D004981 1.3e-46 190.7 207 51.2
C03p86430 Brassica napus HOM05D004093 ORTHO05D004981 1.3e-46 190.7 207 51.2
BolC3t20936H Brassica oleracea HOM05D004093 ORTHO05D004981 1.3e-46 190.7 207 51.2
AL7G17710 Arabidopsis lyrata HOM05D004093 ORTHO05D004981 1.6e-46 190.3 149 63.1
BcaC09g52186 Brassica carinata HOM05D004093 ORTHO05D004981 2.2e-46 189.9 143 64.3
BcaNung04674 Brassica carinata HOM05D004093 ORTHO05D004981 2.2e-46 189.9 143 64.3
C01p04970 Brassica napus HOM05D004093 ORTHO05D004981 2.2e-46 189.9 143 64.3
BolC1t00478H Brassica oleracea HOM05D004093 ORTHO05D004981 2.2e-46 189.9 143 64.3
BraA01t00441Z Brassica rapa HOM05D004093 ORTHO05D004981 2.2e-46 189.9 143 65.0
Sabra09G0065000 Salix brachista HOM05D004093 ORTHO05D004981 4.8e-46 188.7 133 70.7
A01p04580 Brassica napus HOM05D004093 ORTHO05D004981 6.3e-46 188.3 143 63.6
A08p17410 Brassica napus HOM05D004093 ORTHO05D004981 6.3e-46 188.3 144 63.9
Aa31sc178G40 Aethionema arabicum HOM05D004093 ORTHO05D004981 5.3e-45 185.3 149 61.7
CDE04G3016 Ceratophyllum demersum HOM05D004093 ORTHO05D004981 7.7e-44 181.4 223 48.0
Hma1.2p1_1758F.1_g301170 Hydrangea macrophylla HOM05D004093 ORTHO05D004981 7.7e-44 181.4 132 70.5
CDE07G1203 Ceratophyllum demersum HOM05D004093 ORTHO05D004981 1.0e-43 181.0 213 48.8
Aqoxy7G02734 Aquilegia oxysepala HOM05D004093 ORTHO05D004981 3.8e-43 179.1 139 65.5
HPP92_001209 Vanilla planifolia HOM05D004093 ORTHO05D004981 4.2e-42 175.6 152 59.2
EL10Ac1g00697 Beta vulgaris HOM05D004093 ORTHO05D004981 1.2e-41 174.1 219 47.9
Oeu018200.1 Olea europaea HOM05D004093 ORTHO05D004981 1.8e-40 170.2 142 63.4
CANSAT25G3849 Cannabis sativa HOM05D004093 ORTHO05D004981 1.5e-39 167.2 149 59.1
SEGI_31310 Sequoiadendron giganteum HOM05D004093 ORTHO05D004981 1.5e-39 167.2 137 62.8
MELO3C018029.2 Cucumis melo HOM05D004093 ORTHO05D004981 6.3e-38 161.8 228 43.9
Medtr1g113700 Medicago truncatula HOM05D004093 ORTHO05D004981 4.1e-37 159.1 141 57.4
BcaB03g11876 Brassica carinata HOM05D004093 ORTHO05D004981 1.7e-35 153.7 124 61.3
Psat7g009960 Pisum sativum HOM05D004093 ORTHO05D004981 2.2e-35 153.3 182 49.5
AagrBONN_evm.TU.Sc2ySwM_117.2705 Anthoceros agrestis HOM05D004093 ORTHO05D004981 3.8e-35 152.5 200 45.0
AagrBONN_evm.TU.Sc2ySwM_117.2710 Anthoceros agrestis HOM05D004093 ORTHO05D004981 3.8e-35 152.5 200 45.0
Mapoly0029s0082 Marchantia polymorpha HOM05D004093 ORTHO05D004981 1.2e-33 147.5 141 53.2
Manes.07G052300 Manihot esculenta HOM05D004093 ORTHO05D004981 6.1e-33 145.2 90 80.0
Pp3c20_5000 Physcomitrium patens HOM05D004093 ORTHO05D004981 1.4e-32 144.1 140 52.9
Medtr4g052070 Medicago truncatula HOM05D004093 ORTHO05D004981 7.4e-31 138.3 154 50.0
ECA240G1647 Erigeron canadensis HOM05D004093 ORTHO05D004981 2.2e-30 136.7 208 43.3
CBR_g7978 Chara braunii HOM05D004093 ORTHO05D004981 4.1e-29 132.5 140 47.9
Duzib052G0943 Durio zibethinus HOM05D004093 ORTHO05D004981 1.6e-25 120.6 148 47.3
Actinidia28003 Actinidia chinensis HOM05D004093 ORTHO05D004981 6.7e-24 115.2 212 38.2
Aa31LG9G5210 Aethionema arabicum HOM05D004093 ORTHO05D004981 1.4e-21 107.5 83 59.0
Sed0011100 Sechium edule HOM05D004093 ORTHO05D004981 7.7e-20 101.7 140 47.9
MCO14G538 Micromonas commoda HOM05D004093 ORTHO05D004981 1.6e-17 94.0 140 40.0
Cre09.g390986 Chlamydomonas reinhardtii HOM05D004093 ORTHO05D004981 5.7e-15 85.5 138 37.0
Hund17142 Selenicereus undatus HOM05D004093 ORTHO05D004981 1.3e-14 84.3 50 74.0
SMO364G0944 Selaginella moellendorffii HOM05D004093 ORTHO05D004981 6.3e-14 82.0 71 54.9
PRCOL_00006371 Prasinoderma coloniale HOM05D004093 ORTHO05D004981 1.1e-13 81.3 145 34.5
Psat0s8864g0040 Pisum sativum HOM05D004093 ORTHO05D004981 3.1e-13 79.7 137 36.5
FvH4_2g03040 Fragaria vesca HOM05D004093 ORTHO05D004981 1.7e-11 73.9 46 82.6
Gohir.A09G053166 Gossypium hirsutum HOM05D004093 ORTHO05D004981 2.1e-09 67.0 130 36.9


User provided reference genes

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