Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G411.91 Capsicum annuum HOM05D000329 ORTHO05D002813 4.3e-89 331.3 161 100.0
CAN.G799.5 Capsicum annuum HOM05D000329 ORTHO05D002813 7.6e-62 240.7 134 85.8
CAN.G675.8 Capsicum annuum HOM05D000329 ORTHO05D002813 7.8e-59 230.7 134 85.1
CAN.G726.18 Capsicum annuum HOM05D000329 ORTHO05D002813 4.5e-46 188.3 130 73.1
CAN.G588.79 Capsicum annuum HOM05D000329 ORTHO05D002813 7.6e-46 187.6 135 71.1
PGSC0003DMG400014791 Solanum tuberosum HOM05D000329 ORTHO05D002813 1.6e-43 179.9 125 68.8
Nitab4.5_0000411g0080 Nicotiana tabacum HOM05D000329 ORTHO05D002813 3.9e-42 175.3 134 63.4
Solyc08g076390.3 Solanum lycopersicum HOM05D000329 ORTHO05D002813 6.7e-42 174.5 125 67.2
Nitab4.5_0000834g0020 Nicotiana tabacum HOM05D000329 ORTHO05D002813 1.9e-41 172.9 113 71.7
Sopen08g024970 Solanum pennellii HOM05D000329 ORTHO05D002813 5.6e-41 171.4 125 66.4
Peaxi162Scf00456g00038 Petunia axillaris HOM05D000329 ORTHO05D002813 1.5e-38 163.3 130 62.3
CAN.G742.32 Capsicum annuum HOM05D000329 ORTHO05D002813 6.0e-35 151.4 115 66.1
Nitab4.5_0000556g0190 Nicotiana tabacum HOM05D000329 ORTHO05D002813 2.3e-26 122.9 158 44.3
Nitab4.5_0002778g0080 Nicotiana tabacum HOM05D000329 ORTHO05D002813 3.9e-26 122.1 106 53.8
Solyc08g005240.3 Solanum lycopersicum HOM05D000329 ORTHO05D002813 1.1e-25 120.6 98 60.2
PGSC0003DMG400018506 Solanum tuberosum HOM05D000329 ORTHO05D002813 3.3e-25 119.0 98 58.2
Actinidia14783 Actinidia chinensis HOM05D000329 ORTHO05D002813 7.2e-20 101.3 131 42.0
CSS0022676 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D002813 6.1e-19 98.2 141 40.4
CSS0031526 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D002813 1.4e-18 97.1 93 49.5
CSS0041150 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D002813 2.3e-18 96.3 93 49.5
Hma1.2p1_0572F.1_g181280 Hydrangea macrophylla HOM05D000329 ORTHO05D002813 6.7e-18 94.7 93 51.6
Rhsim11G0020600 Rhododendron simsii HOM05D000329 ORTHO05D002813 1.1e-17 94.0 91 50.5
DCAR_008228 Daucus carota HOM05D000329 ORTHO05D002813 4.8e-16 88.6 97 42.3
DCAR_004274 Daucus carota HOM05D000329 ORTHO05D002813 6.3e-16 88.2 91 44.0
Rhsim07G0131400 Rhododendron simsii HOM05D000329 ORTHO05D002813 6.3e-16 88.2 95 45.3
Lj8A309G34 Lonicera japonica HOM05D000329 ORTHO05D002813 1.8e-15 86.7 78 51.3
Oeu017069.1 Olea europaea HOM05D000329 ORTHO05D002813 1.8e-15 86.7 103 38.8
vmacro00286 Vaccinium macrocarpon HOM05D000329 ORTHO05D002813 4.1e-15 85.5 161 35.4
vmacro14195 Vaccinium macrocarpon HOM05D000329 ORTHO05D002813 4.1e-15 85.5 78 48.7
Dinv28998 Davidia involucrata HOM05D000329 ORTHO05D002813 9.1e-15 84.3 133 40.6
Oeu027081.1 Olea europaea HOM05D000329 ORTHO05D002813 9.1e-15 84.3 95 41.1
Cc08_g03300 Coffea canephora HOM05D000329 ORTHO05D002813 5.9e-14 81.6 93 45.2
SalBow6G6602 Salvia bowleyana HOM05D000329 ORTHO05D002813 1.0e-13 80.9 76 50.0
TAR636G1802 Trochodendron aralioides HOM05D000329 ORTHO05D002813 1.3e-13 80.5 104 41.3
SGA_v2.0_scaffold198G41077 Striga asiatica HOM05D000329 ORTHO05D002813 1.7e-13 80.1 83 44.6
Lj2A232T31 Lonicera japonica HOM05D000329 ORTHO05D002813 2.9e-13 79.3 108 43.5
Nn3g19402 Nelumbo nucifera HOM05D000329 ORTHO05D002813 1.1e-12 77.4 150 33.3
ECA246G0743 Erigeron canadensis HOM05D000329 ORTHO05D002813 1.4e-12 77.0 123 34.1
QL12p001398 Quercus lobata HOM05D000329 ORTHO05D002813 1.4e-12 77.0 105 43.8
TAR375G0303 Trochodendron aralioides HOM05D000329 ORTHO05D002813 1.4e-12 77.0 77 50.6
TAR629G2742 Trochodendron aralioides HOM05D000329 ORTHO05D002813 1.9e-12 76.6 77 49.4
VMungo1215G1197 Vigna mungo HOM05D000329 ORTHO05D002813 1.9e-12 76.6 95 42.1
PSO063G1668 Papaver somniferum HOM05D000329 ORTHO05D002813 3.2e-12 75.9 112 35.7
Cpa.g.sc90.3 Carica papaya HOM05D000329 ORTHO05D002813 7.2e-12 74.7 80 50.0
Manes.17G009900 Manihot esculenta HOM05D000329 ORTHO05D002813 9.4e-12 74.3 99 39.4
MSTRG.24844 Avicennia marina HOM05D000329 ORTHO05D002813 1.2e-11 73.9 128 36.7
Gohir.D03G175900 Gossypium hirsutum HOM05D000329 ORTHO05D002813 2.1e-11 73.2 90 41.1
Gohir.D12G209000 Gossypium hirsutum HOM05D000329 ORTHO05D002813 2.1e-11 73.2 78 47.4
Gorai.008G224500 Gossypium raimondii HOM05D000329 ORTHO05D002813 2.1e-11 73.2 78 47.4
Gohir.A03G000035 Gossypium hirsutum HOM05D000329 ORTHO05D002813 3.6e-11 72.4 90 42.2
Gorai.003G185200 Gossypium raimondii HOM05D000329 ORTHO05D002813 3.6e-11 72.4 90 41.1
FAN08G0451 Fragaria x ananassa HOM05D000329 ORTHO05D002813 4.7e-11 72.0 122 37.7
MD16G1280000 Malus domestica HOM05D000329 ORTHO05D002813 4.7e-11 72.0 113 41.6
Prupe.5G028800 Prunus persica HOM05D000329 ORTHO05D002813 4.7e-11 72.0 106 38.7
Gohir.A12G206600 Gossypium hirsutum HOM05D000329 ORTHO05D002813 6.1e-11 71.6 78 46.2
Ca_25182_v3 Cicer arietinum L. HOM05D000329 ORTHO05D002813 8.0e-11 71.2 119 37.0
Ciclev10000262m.g Citrus clementina HOM05D000329 ORTHO05D002813 8.0e-11 71.2 133 33.8
HanXRQChr03g0083331 Helianthus annuus HOM05D000329 ORTHO05D002813 1.0e-10 70.9 77 40.3
GSVIVG01013083001 Vitis vinifera HOM05D000329 ORTHO05D002813 1.0e-10 70.9 94 41.5
Lj2g0019046 Lotus japonicus HOM05D000329 ORTHO05D002813 1.4e-10 70.5 80 43.8
Sed0016819 Sechium edule HOM05D000329 ORTHO05D002813 1.4e-10 70.5 77 46.8
Duzib068G0601 Durio zibethinus HOM05D000329 ORTHO05D002813 1.8e-10 70.1 78 43.6
FAN13G1113 Fragaria x ananassa HOM05D000329 ORTHO05D002813 1.8e-10 70.1 122 36.9
Glyma.01G014700 Glycine max HOM05D000329 ORTHO05D002813 1.8e-10 70.1 80 43.8
Glyma.09G207400 Glycine max HOM05D000329 ORTHO05D002813 1.8e-10 70.1 95 40.0
Medtr5g029370 Medicago truncatula HOM05D000329 ORTHO05D002813 1.8e-10 70.1 80 45.0
Phvul.002G137100 Phaseolus vulgaris HOM05D000329 ORTHO05D002813 1.8e-10 70.1 80 42.5
Phvul.003G283100 Phaseolus vulgaris HOM05D000329 ORTHO05D002813 2.3e-10 69.7 74 50.0
VMungo0251G2744 Vigna mungo HOM05D000329 ORTHO05D002813 2.3e-10 69.7 80 46.2
Atru.chr6.1514 Acer truncatum HOM05D000329 ORTHO05D002813 3.9e-10 68.9 89 42.7
FAN04G0697 Fragaria x ananassa HOM05D000329 ORTHO05D002813 3.9e-10 68.9 122 36.1
PSO782G4222 Papaver somniferum HOM05D000329 ORTHO05D002813 3.9e-10 68.9 110 34.5
MSTRG.12168 Avicennia marina HOM05D000329 ORTHO05D002813 8.8e-10 67.8 74 43.2
Haze_08140 Corylus avellana HOM05D000329 ORTHO05D002813 8.8e-10 67.8 74 47.3
HanXRQChr06g0172601 Helianthus annuus HOM05D000329 ORTHO05D002813 8.8e-10 67.8 138 28.3
HanXRQChr13g0415761 Helianthus annuus HOM05D000329 ORTHO05D002813 8.8e-10 67.8 92 37.0
AUR62018646 Chenopodium quinoa HOM05D000329 ORTHO05D002813 1.1e-09 67.4 90 43.3
TPR.G19433 Trifolium pratense HOM05D000329 ORTHO05D002813 1.1e-09 67.4 95 40.0
CAN.G137.7 Capsicum annuum HOM05D000329 ORTHO05D002813 1.5e-09 67.0 45 68.9
Gohir.D08G175000 Gossypium hirsutum HOM05D000329 ORTHO05D002813 1.5e-09 67.0 78 42.3
Gorai.004G182600 Gossypium raimondii HOM05D000329 ORTHO05D002813 1.5e-09 67.0 78 42.3
ClCG10G001330 Citrullus lanatus HOM05D000329 ORTHO05D002813 2.6e-09 66.2 78 44.9
FAN18G0640 Fragaria x ananassa HOM05D000329 ORTHO05D002813 2.6e-09 66.2 125 35.2
Gohir.A08G154100 Gossypium hirsutum HOM05D000329 ORTHO05D002813 2.6e-09 66.2 78 42.3
Psat2g138680 Pisum sativum HOM05D000329 ORTHO05D002813 2.6e-09 66.2 96 38.5
Potri.003G096100 Populus trichocarpa HOM05D000329 ORTHO05D002813 2.6e-09 66.2 96 37.5
ECA240G2154 Erigeron canadensis HOM05D000329 ORTHO05D002813 3.3e-09 65.9 90 37.8
CAN.G186.18 Capsicum annuum HOM05D000912 ORTHO05D001232 4.4e-09 65.5 49 59.2
CiPaw.11G097900 Carya illinoinensis HOM05D000329 ORTHO05D002813 4.4e-09 65.5 139 36.7
FAN18G1461 Fragaria x ananassa HOM05D000329 ORTHO05D002813 4.4e-09 65.5 110 37.3
RcHm_v2.0_Chr7g0211721 Rosa chinensis HOM05D000329 ORTHO05D002813 4.4e-09 65.5 94 40.4
Duzib084G1263 Durio zibethinus HOM05D000329 ORTHO05D002813 5.7e-09 65.1 95 35.8
Migut.E00750 Erythranthe guttata HOM05D000329 ORTHO05D002813 5.7e-09 65.1 73 42.5
FvH4_5g22980 Fragaria vesca HOM05D000329 ORTHO05D002813 5.7e-09 65.1 125 35.2
HanXRQChr17g0538141 Helianthus annuus HOM05D000329 ORTHO05D002813 5.7e-09 65.1 90 36.7
TWI81G0430 Tripterygium wilfordii HOM05D000329 ORTHO05D002813 5.7e-09 65.1 115 34.8
Lalb_Chr05g0215811 Lupinus albus HOM05D000329 ORTHO05D002813 7.4e-09 64.7 148 33.1
MD06G1026100 Malus domestica HOM05D000329 ORTHO05D002813 7.4e-09 64.7 117 35.9
Sopen08g001270 Solanum pennellii HOM05D000329 ORTHO05D002813 7.4e-09 64.7 44 68.2
Sabra01G0106300 Salix brachista HOM05D000329 ORTHO05D002813 9.7e-09 64.3 104 36.5
Sc01g0007190 Simmondsia chinensis HOM05D000329 ORTHO05D002813 9.7e-09 64.3 97 36.1
Potri.001G137700 Populus trichocarpa HOM05D000329 ORTHO05D002813 1.3e-08 63.9 128 32.0
Hund11192 Selenicereus undatus HOM05D000329 ORTHO05D002813 1.3e-08 63.9 87 39.1
Nn1g00196 Nelumbo nucifera HOM05D000329 ORTHO05D002813 1.7e-08 63.5 78 39.7
CDE03G0389 Ceratophyllum demersum HOM05D000329 ORTHO05D002813 2.2e-08 63.2 81 40.7
COL.COLO4_16953 Corchorus olitorius HOM05D000329 ORTHO05D002813 2.2e-08 63.2 78 41.0
MELO3C003435.2 Cucumis melo HOM05D000329 ORTHO05D002813 2.2e-08 63.2 96 36.5
Duzib205G0915 Durio zibethinus HOM05D000329 ORTHO05D002813 2.8e-08 62.8 78 41.0
Lsat_1_v5_gn_6_81220 Lactuca sativa HOM05D000329 ORTHO05D002813 2.8e-08 62.8 93 36.6
CiPaw.12G067700 Carya illinoinensis HOM05D000329 ORTHO05D002813 4.8e-08 62.0 80 42.5
ClCG09G011670 Citrullus lanatus HOM05D000329 ORTHO05D002813 4.8e-08 62.0 73 42.5
Sed0024692 Sechium edule HOM05D000329 ORTHO05D002813 4.8e-08 62.0 79 39.2
Lalb_Chr16g0381121 Lupinus albus HOM05D000329 ORTHO05D002813 6.3e-08 61.6 93 41.9
Hund14369 Selenicereus undatus HOM05D000329 ORTHO05D002813 6.3e-08 61.6 83 39.8
AUR62007348 Chenopodium quinoa HOM05D000329 ORTHO05D002813 8.2e-08 61.2 75 42.7
Ah.12g055450 Amaranthus hybridus HOM05D000329 ORTHO05D002813 1.4e-07 60.5 127 35.4
Aqoxy3G02191 Aquilegia oxysepala HOM05D000329 ORTHO05D002813 1.4e-07 60.5 70 42.9
MBI04_g32197_MAGBIO Magnolia biondii HOM05D000329 ORTHO05D002813 1.4e-07 60.5 101 31.7
arahy.Tifrunner.gnm1.ann1.NP34ZW Arachis hypogaea HOM05D000329 ORTHO05D002813 1.8e-07 60.1 91 41.8
arahy.Tifrunner.gnm1.ann1.NS6D80 Arachis hypogaea HOM05D000329 ORTHO05D002813 1.8e-07 60.1 91 41.8
CDE06G1958 Ceratophyllum demersum HOM05D000329 ORTHO05D002813 1.8e-07 60.1 81 39.5
Lsat_1_v5_gn_3_19221 Lactuca sativa HOM05D000329 ORTHO05D002813 1.8e-07 60.1 77 33.8
TWI60G0333 Tripterygium wilfordii HOM05D000329 ORTHO05D002813 3.1e-07 59.3 123 32.5
unitig_32.g10898 Utricularia gibba HOM05D000329 ORTHO05D002813 5.3e-07 58.5 70 38.6
MELO3C013826.2 Cucumis melo HOM05D000329 ORTHO05D002813 9.1e-07 57.8 76 44.7
CsaV3_3G001400 Cucumis sativus L. HOM05D000329 ORTHO05D002813 2.6e-06 56.2 77 42.9
Eucgr.D02224 Eucalyptus grandis HOM05D000329 ORTHO05D002813 2.6e-06 56.2 76 31.6
THA.LOC104798340 Tarenaya hassleriana HOM05D000329 ORTHO05D002813 2.6e-06 56.2 83 37.3
EL10Ac5g12022 Beta vulgaris HOM05D000329 ORTHO05D002813 4.5e-06 55.5 74 41.9
Dinv29150 Davidia involucrata HOM05D000329 ORTHO05D002813 5.9e-06 55.1 90 35.6
unitig_748.g8256 Utricularia gibba HOM05D000329 ORTHO05D002813 7.7e-06 54.7 55 45.5


User provided reference genes

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