Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G352.10 Capsicum annuum HOM05D006543 ORTHO05D008308 3.5e-280 967.6 478 100.0
Sopen03g030490 Solanum pennellii HOM05D006543 ORTHO05D008308 6.6e-247 857.1 479 89.4
Solyc03g111360.3 Solanum lycopersicum HOM05D006543 ORTHO05D008308 3.1e-244 848.2 479 87.9
PGSC0003DMG400015239 Solanum tuberosum HOM05D006543 ORTHO05D008308 3.1e-244 848.2 479 88.5
Nitab4.5_0004750g0040 Nicotiana tabacum HOM05D006543 ORTHO05D008308 6.6e-239 830.5 478 86.4
Nitab4.5_0003282g0090 Nicotiana tabacum HOM05D006543 ORTHO05D008308 1.9e-233 812.4 478 84.5
Peaxi162Scf00089g00625 Petunia axillaris HOM05D006543 ORTHO05D008308 5.3e-228 794.3 475 84.2
Hma1.2p1_0046F.1_g027560 Hydrangea macrophylla HOM05D006543 ORTHO05D008308 4.4e-190 668.3 481 68.0
Sabra12G0067500 Salix brachista HOM05D006543 ORTHO05D008308 8.2e-189 664.1 485 68.9
Actinidia37252 Actinidia chinensis HOM05D006543 ORTHO05D008308 3.8e-186 655.2 480 67.7
vmacro16708 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 1.9e-185 652.9 481 67.8
MSTRG.11294 Avicennia marina HOM05D006543 ORTHO05D008308 7.2e-185 651.0 482 68.0
CSS0036636 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 7.2e-185 651.0 481 67.4
Potri.012G092900 Populus trichocarpa HOM05D006543 ORTHO05D008308 4.7e-184 648.3 492 66.5
Lj5A100T59 Lonicera japonica HOM05D006543 ORTHO05D008308 8.0e-184 647.5 480 66.9
Manes.06G115100 Manihot esculenta HOM05D006543 ORTHO05D008308 1.4e-183 646.7 487 66.3
Oeu045480.1 Olea europaea HOM05D006543 ORTHO05D008308 2.3e-183 646.0 492 65.2
RcHm_v2.0_Chr7g0191211 Rosa chinensis HOM05D006543 ORTHO05D008308 3.0e-183 645.6 479 67.4
Cc04_g10340 Coffea canephora HOM05D006543 ORTHO05D008308 6.8e-183 644.4 477 68.1
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 6.8e-183 644.4 476 67.6
Rhsim12G0172000 Rhododendron simsii HOM05D006543 ORTHO05D008308 2.6e-182 642.5 482 66.0
CANSAT80G2173 Cannabis sativa HOM05D006543 ORTHO05D008308 1.3e-181 640.2 482 66.2
QL10p005246 Quercus lobata HOM05D006543 ORTHO05D008308 2.2e-181 639.4 482 66.2
Prupe.5G157200 Prunus persica HOM05D006543 ORTHO05D008308 1.2e-179 633.6 481 65.7
FvH4_5g07331 Fragaria vesca HOM05D006543 ORTHO05D008308 1.6e-179 633.3 478 65.9
Thecc.03G122600 Theobroma cacao HOM05D006543 ORTHO05D008308 1.7e-178 629.8 479 65.1
Ciclev10020014m.g Citrus clementina HOM05D006543 ORTHO05D008308 3.8e-178 628.6 477 66.0
Duzib068G0092 Durio zibethinus HOM05D006543 ORTHO05D008308 3.8e-178 628.6 479 65.6
HanXRQChr05g0154751 Helianthus annuus HOM05D006543 ORTHO05D008308 3.8e-178 628.6 492 63.4
arahy.Tifrunner.gnm1.ann1.8LT8QW Arachis hypogaea HOM05D006543 ORTHO05D008308 5.0e-178 628.2 478 66.3
MD14G1163800 Malus domestica HOM05D006543 ORTHO05D008308 2.5e-177 625.9 481 65.5
TAR374G1424 Trochodendron aralioides HOM05D006543 ORTHO05D008308 3.2e-177 625.5 480 64.4
arahy.Tifrunner.gnm1.ann1.YD5AXN Arachis hypogaea HOM05D006543 ORTHO05D008308 1.6e-176 623.2 476 66.0
AUR62025730 Chenopodium quinoa HOM05D006543 ORTHO05D008308 1.6e-176 623.2 478 64.6
Atru.chr9.1008 Acer truncatum HOM05D006543 ORTHO05D008308 3.6e-176 622.1 480 65.8
Lsat_1_v5_gn_5_13221 Lactuca sativa HOM05D006543 ORTHO05D008308 4.7e-176 621.7 487 64.5
ECA246G2708 Erigeron canadensis HOM05D006543 ORTHO05D008308 1.4e-175 620.2 480 64.2
Gorai.006G270300 Gossypium raimondii HOM05D006543 ORTHO05D008308 1.8e-175 619.8 476 64.9
Aqoxy5G03584 Aquilegia oxysepala HOM05D006543 ORTHO05D008308 5.2e-175 618.2 487 64.1
TWI14G0972 Tripterygium wilfordii HOM05D006543 ORTHO05D008308 1.2e-174 617.1 482 64.5
CiPaw.11G012100 Carya illinoinensis HOM05D006543 ORTHO05D008308 1.5e-174 616.7 485 64.7
AUR62001276 Chenopodium quinoa HOM05D006543 ORTHO05D008308 1.5e-174 616.7 478 64.6
Gohir.A09G244900 Gossypium hirsutum HOM05D006543 ORTHO05D008308 3.4e-174 615.5 478 64.9
COL.COLO4_09265 Corchorus olitorius HOM05D006543 ORTHO05D008308 9.8e-174 614.0 483 64.2
Lalb_Chr08g0236931 Lupinus albus HOM05D006543 ORTHO05D008308 2.2e-173 612.8 476 64.5
MBI06_g38704_MAGBIO Magnolia biondii HOM05D006543 ORTHO05D008308 2.2e-173 612.8 488 64.1
Hund18538 Selenicereus undatus HOM05D006543 ORTHO05D008308 6.3e-173 611.3 479 63.9
Carub.0008s2404 Capsella rubella HOM05D006543 ORTHO05D008308 8.3e-173 610.9 483 63.1
Aa31LG1G18710 Aethionema arabicum HOM05D006543 ORTHO05D008308 1.4e-172 610.1 486 63.2
Medtr3g075110 Medicago truncatula HOM05D006543 ORTHO05D008308 1.4e-172 610.1 479 63.3
BcaNung06574 Brassica carinata HOM05D006543 ORTHO05D008308 5.4e-172 608.2 485 61.9
AL8G40370 Arabidopsis lyrata HOM05D006543 ORTHO05D008308 9.1e-172 607.4 488 61.7
Psat5g141840 Pisum sativum HOM05D006543 ORTHO05D008308 1.2e-171 607.1 477 63.7
THA.LOC104818195 Tarenaya hassleriana HOM05D006543 ORTHO05D008308 3.5e-171 605.5 488 62.5
Sp2g26410 Schrenkiella parvula HOM05D006543 ORTHO05D008308 4.5e-171 605.1 485 61.4
AT5G63290 Arabidopsis thaliana HOM05D006543 ORTHO05D008308 5.9e-171 604.7 487 61.2
BolC9t53839H Brassica oleracea HOM05D006543 ORTHO05D008308 1.7e-170 603.2 485 61.6
Thhalv10004112m.g Eutrema salsugineum HOM05D006543 ORTHO05D008308 1.7e-170 603.2 482 61.2
MELO3C026233.2 Cucumis melo HOM05D006543 ORTHO05D008308 3.8e-170 602.1 442 66.7
EL10Ac7g18072 Beta vulgaris HOM05D006543 ORTHO05D008308 5.0e-170 601.7 478 64.2
Phvul.009G169000 Phaseolus vulgaris HOM05D006543 ORTHO05D008308 6.6e-170 601.3 478 62.3
GSVIVG01007545001 Vitis vinifera HOM05D006543 ORTHO05D008308 6.6e-170 601.3 480 64.6
Glyma.04G192800 Glycine max HOM05D006543 ORTHO05D008308 4.3e-169 598.6 483 62.5
C09p09260 Brassica napus HOM05D006543 ORTHO05D008308 5.6e-169 598.2 485 61.4
A09p08200 Brassica napus HOM05D006543 ORTHO05D008308 3.6e-168 595.5 487 61.0
BraA09t36471Z Brassica rapa HOM05D006543 ORTHO05D008308 4.7e-168 595.1 487 61.0
CsaV3_1G000810 Cucumis sativus L. HOM05D006543 ORTHO05D008308 6.1e-168 594.7 442 66.3
PGR044G1877 Punica granatum HOM05D006543 ORTHO05D008308 8.9e-167 590.9 484 62.4
TPR.G24245 Trifolium pratense HOM05D006543 ORTHO05D008308 8.9e-167 590.9 476 62.6
Migut.I00467 Erythranthe guttata HOM05D006543 ORTHO05D008308 1.5e-166 590.1 496 62.9
Sed0023544 Sechium edule HOM05D006543 ORTHO05D008308 2.0e-166 589.7 447 65.8
Lj1g0002208 Lotus japonicus HOM05D006543 ORTHO05D008308 3.4e-166 589.0 479 62.0
PSO729G0022 Papaver somniferum HOM05D006543 ORTHO05D008308 4.6e-163 578.6 476 60.9
ClCG06G017630 Citrullus lanatus HOM05D006543 ORTHO05D008308 1.0e-162 577.4 447 64.7
SGA_v2.0_scaffold338G49246 Striga asiatica HOM05D006543 ORTHO05D008308 2.6e-158 562.8 450 64.0
Sc04g0000970 Simmondsia chinensis HOM05D006543 ORTHO05D008308 3.7e-157 558.9 482 61.0
Zm00001eb001600 Zea mays HOM05D006543 ORTHO05D008308 3.2e-156 555.8 461 59.7
CDE04G0939 Ceratophyllum demersum HOM05D006543 ORTHO05D008308 1.0e-154 550.8 480 56.7
Os12g0270100 Oryza sativa ssp. japonica HOM05D006543 ORTHO05D008308 1.3e-154 550.4 428 62.9
Lsat_1_v5_gn_4_53181 Lactuca sativa HOM05D006543 ORTHO05D008308 1.1e-153 547.4 501 58.3
Ah.15g095320 Amaranthus hybridus HOM05D006543 ORTHO05D008308 9.5e-153 544.3 481 58.8
Gohir.D09G245800 Gossypium hirsutum HOM05D006543 ORTHO05D008308 2.1e-147 526.6 374 68.4
unitig_22.g5878 Utricularia gibba HOM05D006543 ORTHO05D008308 2.3e-146 523.1 385 65.2
Dinv11106 Davidia involucrata HOM05D006543 ORTHO05D008308 6.2e-136 488.4 319 73.4
SEGI_06622 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 3.1e-135 486.1 476 50.6
Ca_16091_v3 Cicer arietinum L. HOM05D006543 ORTHO05D008308 1.2e-134 484.2 338 68.3
FvH4_5g07462 Fragaria vesca HOM05D006543 ORTHO05D008308 6.4e-133 478.4 383 63.2
VMungo1309G1872 Vigna mungo HOM05D006543 ORTHO05D008308 2.0e-126 456.8 316 68.7
Pp3c13_23570 Physcomitrium patens HOM05D006543 ORTHO05D008308 2.4e-124 449.9 454 48.7
Mapoly0005s0190 Marchantia polymorpha HOM05D006543 ORTHO05D008308 5.3e-119 432.2 473 46.5
SMO364G0036 Selaginella moellendorffii HOM05D006543 ORTHO05D008308 2.1e-104 383.6 431 45.9
vmacro23154 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 2.5e-100 370.2 255 70.2
CBR_g58805 Chara braunii HOM05D006543 ORTHO05D008308 2.9e-93 346.7 406 42.6
PRCOL_00001606 Prasinoderma coloniale HOM05D006543 ORTHO05D008308 3.8e-93 346.3 441 42.4
Cre03.g171461 Chlamydomonas reinhardtii HOM05D006543 ORTHO05D008308 1.4e-92 344.4 387 43.7
ATR0733G153 Amborella trichopoda HOM05D006543 ORTHO05D008308 5.5e-92 342.4 361 48.8
CSS0033277 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 1.8e-90 337.4 299 57.5
vmacro16659 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 1.8e-90 337.4 319 55.8
BcaB04g19911 Brassica carinata HOM05D006543 ORTHO05D008308 1.4e-87 327.8 271 63.1
Nn3g16581 Nelumbo nucifera HOM05D006543 ORTHO05D008308 4.1e-87 326.2 262 62.6
Glyma.06G173133 Glycine max HOM05D006543 ORTHO05D008308 6.9e-87 325.5 239 64.9
CARHR277150 Cardamine hirsuta HOM05D006543 ORTHO05D008308 3.4e-86 323.2 276 60.9
AagrBONN_evm.TU.Sc2ySwM_344.2040 Anthoceros agrestis HOM05D006543 ORTHO05D008308 1.3e-85 321.2 398 41.0
MCO01G029 Micromonas commoda HOM05D006543 ORTHO05D008308 1.8e-82 310.8 449 40.1
CARHR277160 Cardamine hirsuta HOM05D006543 ORTHO05D008308 3.0e-74 283.5 219 60.3
Actinidia36787 Actinidia chinensis HOM05D006543 ORTHO05D008308 1.1e-71 275.0 243 58.0
MD06G1157200 Malus domestica HOM05D006543 ORTHO05D008308 4.8e-64 249.6 205 62.0
BcaB01g05367 Brassica carinata HOM05D006543 ORTHO05D008308 1.7e-61 241.1 236 54.2
SEGI_28812 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 9.5e-60 235.3 191 56.0
CAN.G352.9 Capsicum annuum HOM05D006543 ORTHO05D003127 6.1e-59 232.6 116 98.3
Oeu045471.1 Olea europaea HOM05D006543 ORTHO05D008308 1.2e-49 201.8 118 80.5
Oeu037566.1 Olea europaea HOM05D006543 ORTHO05D008308 7.5e-49 199.1 118 79.7
CAN.G352.8 Capsicum annuum HOM05D006543 ORTHO05D008308 3.3e-44 183.7 100 95.0
Glyma.06G173067 Glycine max HOM05D006543 ORTHO05D008308 4.3e-44 183.3 195 53.8
FvH4_5g07400 Fragaria vesca HOM05D006543 ORTHO05D008308 7.3e-28 129.4 108 62.0
MD06G1156000 Malus domestica HOM05D006543 ORTHO05D008308 3.4e-25 120.6 115 53.9
Cfa009975 Carpinus fangiana HOM05D006543 ORTHO05D008308 9.9e-09 65.9 44 68.2
Actinidia26749 Actinidia chinensis HOM05D006543 ORTHO05D008308 2.4e-07 61.2 46 63.0
C09p09270 Brassica napus HOM05D039327 ORTHO05D041005 4.2e-07 60.5 52 57.7
BolC9t53840H Brassica oleracea HOM05D039327 ORTHO05D041005 4.2e-07 60.5 52 57.7
MD06G1152300 Malus domestica HOM05D006543 ORTHO05D008308 2.1e-06 58.2 57 49.1


User provided reference genes

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