Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G309.139 Capsicum annuum HOM05D002048 ORTHO05D002146 3.6e-134 481.9 293 100.0
CAN.G1353.25 Capsicum annuum HOM05D002048 ORTHO05D002146 1.2e-65 254.2 157 86.0
CAN.G134.157 Capsicum annuum HOM05D002496 ORTHO05D002787 7.3e-55 218.4 157 79.0
CAN.G1353.19 Capsicum annuum HOM05D002496 ORTHO05D002787 1.3e-54 217.6 157 77.1
CAN.G134.146 Capsicum annuum HOM05D002518 ORTHO05D002630 6.9e-53 211.8 225 56.9
CAN.G134.150 Capsicum annuum HOM05D002048 ORTHO05D002146 1.3e-48 197.6 153 73.9
CAN.G309.143 Capsicum annuum HOM05D002496 ORTHO05D002630 3.3e-47 193.0 220 56.8
CAN.G309.100 Capsicum annuum HOM05D002496 ORTHO05D002787 2.1e-46 190.3 217 56.7
CAN.G309.125 Capsicum annuum HOM05D002496 ORTHO05D002787 4.8e-46 189.1 194 62.9
CAN.G134.147 Capsicum annuum HOM05D002048 ORTHO05D002146 1.8e-45 187.2 200 58.0
CAN.G134.152 Capsicum annuum HOM05D002518 ORTHO05D002630 1.5e-44 184.1 113 85.0
CAN.G1579.13 Capsicum annuum HOM05D002048 ORTHO05D002146 1.4e-42 177.6 194 57.2
CAN.G309.117 Capsicum annuum HOM05D002048 ORTHO05D002146 7.9e-41 171.8 218 49.5
CAN.G309.99 Capsicum annuum HOM05D002496 ORTHO05D002787 1.0e-40 171.4 134 73.1
CAN.G134.155 Capsicum annuum HOM05D002048 ORTHO05D000001 2.1e-38 163.7 149 63.8
CAN.G1353.13 Capsicum annuum HOM05D002048 ORTHO05D115676 1.8e-37 160.6 192 55.2
CAN.G309.96 Capsicum annuum HOM05D002048 ORTHO05D002146 1.7e-35 154.1 159 59.7
CAN.G1703.10 Capsicum annuum HOM05D002048 ORTHO05D002146 2.7e-33 146.7 82 91.5
CAN.G1353.4 Capsicum annuum HOM05D002048 ORTHO05D002146 4.6e-33 146.0 170 53.5
CAN.G1353.6 Capsicum annuum HOM05D002048 ORTHO05D002146 8.7e-32 141.7 82 89.0
CAN.G309.112 Capsicum annuum HOM05D002048 ORTHO05D002146 8.7e-32 141.7 183 51.9
CAN.G309.120 Capsicum annuum HOM05D002048 ORTHO05D002146 5.7e-31 139.0 82 85.4
CAN.G1579.11 Capsicum annuum HOM05D002048 ORTHO05D002146 8.2e-30 135.2 189 49.7
CAN.G1353.29 Capsicum annuum HOM05D002048 ORTHO05D002146 6.5e-27 125.6 84 78.6
CAN.G309.136 Capsicum annuum HOM05D002048 ORTHO05D002146 3.5e-25 119.8 106 60.4
CAN.G134.140 Capsicum annuum HOM05D002048 ORTHO05D002146 3.9e-24 116.3 68 86.8
CAN.G309.134 Capsicum annuum HOM05D002496 ORTHO05D002787 4.1e-21 106.3 99 58.6
CAN.G309.140 Capsicum annuum HOM05D002518 ORTHO05D002630 1.5e-20 104.4 66 84.8
CAN.G2318.1 Capsicum annuum HOM05D002048 ORTHO05D002146 7.7e-20 102.1 115 53.9
Solyc11g044340.3 Solanum lycopersicum HOM05D002048 ORTHO05D002146 5.0e-19 99.4 132 49.2
Sopen11g019850 Solanum pennellii HOM05D002048 ORTHO05D002146 5.0e-19 99.4 132 49.2
CAN.G1816.1 Capsicum annuum HOM05D002048 ORTHO05D002146 1.6e-17 94.4 158 43.0
CAN.G1353.21 Capsicum annuum HOM05D002048 ORTHO05D002146 3.6e-17 93.2 157 41.4
Nitab4.5_0001093g0090 Nicotiana tabacum HOM05D002048 ORTHO05D002146 2.0e-15 87.4 166 36.7
CAN.G1833.7 Capsicum annuum HOM05D002048 ORTHO05D002146 3.3e-15 86.7 47 91.5
CAN.G575.101 Capsicum annuum HOM05D002048 ORTHO05D002146 3.3e-15 86.7 47 91.5
CAN.G575.130 Capsicum annuum HOM05D002048 ORTHO05D002146 3.3e-15 86.7 65 67.7
CAN.G134.153 Capsicum annuum HOM05D002048 ORTHO05D002146 5.7e-15 85.9 60 75.0
Peaxi162Scf00152g00644 Petunia axillaris HOM05D002048 ORTHO05D002146 7.4e-15 85.5 110 48.2
CAN.G309.129 Capsicum annuum HOM05D002048 ORTHO05D002146 9.7e-15 85.1 47 89.4
CAN.G1353.2 Capsicum annuum HOM05D002048 ORTHO05D002146 1.3e-14 84.7 59 76.3
CAN.G575.107 Capsicum annuum HOM05D002048 ORTHO05D002146 1.7e-14 84.3 80 60.0
CAN.G309.109 Capsicum annuum HOM05D002048 ORTHO05D002146 2.8e-14 83.6 50 82.0
CAN.G309.93 Capsicum annuum HOM05D002048 ORTHO05D002146 2.8e-14 83.6 47 89.4
Nitab4.5_0000001g0490 Nicotiana tabacum HOM05D002048 ORTHO05D002146 1.8e-13 80.9 162 36.4
CAN.G309.116 Capsicum annuum HOM05D002048 ORTHO05D002146 6.9e-13 79.0 76 60.5
CAN.G1353.8 Capsicum annuum HOM05D002048 ORTHO05D002146 4.5e-12 76.3 178 38.8
Actinidia02440 Actinidia chinensis HOM05D002048 ORTHO05D002146 3.0e-08 63.5 136 31.6
CAN.G1353.18 Capsicum annuum HOM05D002048 ORTHO05D002146 3.0e-08 63.5 35 88.6
CAN.G309.149 Capsicum annuum HOM05D002048 ORTHO05D002146 3.0e-08 63.5 96 42.7
TAR625G1475 Trochodendron aralioides HOM05D002048 ORTHO05D002146 5.1e-08 62.8 139 34.5
Migut.N01126 Erythranthe guttata HOM05D002048 ORTHO05D002146 8.8e-08 62.0 130 30.8
Phvul.007G047100 Phaseolus vulgaris HOM05D002048 ORTHO05D002146 1.1e-07 61.6 146 33.6
Gorai.012G147100 Gossypium raimondii HOM05D002048 ORTHO05D002146 1.5e-07 61.2 139 32.4
Psat6g213120 Pisum sativum HOM05D002048 ORTHO05D002146 2.0e-07 60.8 132 31.1
Sc18g0007360 Simmondsia chinensis HOM05D002048 ORTHO05D002146 2.0e-07 60.8 129 29.5
Dinv09538 Davidia involucrata HOM05D002048 ORTHO05D002146 2.6e-07 60.5 129 31.8
TPR.G21140 Trifolium pratense HOM05D002048 ORTHO05D002146 3.3e-07 60.1 49 53.1
HanXRQChr13g0402331 Helianthus annuus HOM05D002048 ORTHO05D002146 4.4e-07 59.7 135 31.1
CAN.G309.147 Capsicum annuum HOM05D002048 ORTHO05D000377 5.7e-07 59.3 99 40.4
CARHR036140 Cardamine hirsuta HOM05D002048 ORTHO05D002146 5.7e-07 59.3 132 26.5
Medtr1g106025 Medicago truncatula HOM05D002048 ORTHO05D002146 7.4e-07 58.9 49 55.1
Sed0000428 Sechium edule HOM05D002048 ORTHO05D002146 9.7e-07 58.5 49 55.1
MSTRG.27767 Avicennia marina HOM05D002048 ORTHO05D002146 2.2e-06 57.4 127 30.7
Cfa013740 Carpinus fangiana HOM05D002048 ORTHO05D002146 2.2e-06 57.4 139 30.2
CsaV3_4G000090 Cucumis sativus L. HOM05D002048 ORTHO05D002146 2.2e-06 57.4 49 51.0
MELO3C018022.2 Cucumis melo HOM05D002048 ORTHO05D002146 2.8e-06 57.0 136 31.6
CSS0035447 Camellia sinensis var. sinensis HOM05D002048 ORTHO05D002146 4.8e-06 56.2 132 31.8
Cfa004700 Carpinus fangiana HOM05D002048 ORTHO05D002146 4.8e-06 56.2 136 29.4
Lalb_Chr06g0164981 Lupinus albus HOM05D002048 ORTHO05D002146 4.8e-06 56.2 138 32.6
Cc02_g20050 Coffea canephora HOM05D002048 ORTHO05D002146 8.2e-06 55.5 49 59.2
COL.COLO4_28464 Corchorus olitorius HOM05D002048 ORTHO05D002146 8.2e-06 55.5 51 47.1
Lj9A337T45 Lonicera japonica HOM05D002048 ORTHO05D002146 8.2e-06 55.5 132 28.8
Thecc.02G119900 Theobroma cacao HOM05D002048 ORTHO05D002146 8.2e-06 55.5 134 29.9
Thecc.08G084800 Theobroma cacao HOM05D002048 ORTHO05D002146 8.2e-06 55.5 58 44.8


User provided reference genes

Program Settings