Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G3.24 Capsicum annuum HOM05D000806 ORTHO05D007429 7.0e-104 380.6 185 100.0
Nn010s41435 Nelumbo nucifera HOM05D000806 ORTHO05D007429 6.4e-97 357.5 185 93.0
Nn265s45955 Nelumbo nucifera HOM05D000806 ORTHO05D007429 6.4e-97 357.5 185 93.0
Hma1.2p1_0035F.1_g021940 Hydrangea macrophylla HOM05D000806 ORTHO05D007429 1.1e-96 356.7 185 94.1
Gohir.A07G163672 Gossypium hirsutum HOM05D000806 ORTHO05D007429 1.2e-95 353.2 185 91.4
Sed0015006 Sechium edule HOM05D000806 ORTHO05D007429 2.7e-95 352.1 185 91.9
HanXRQChr01g0020361 Helianthus annuus HOM05D000806 ORTHO05D007429 4.6e-95 351.3 185 91.4
HanXRQChr10g0283551 Helianthus annuus HOM05D000806 ORTHO05D007429 4.6e-95 351.3 185 91.4
HanXRQChr10g0289261 Helianthus annuus HOM05D000806 ORTHO05D007429 4.6e-95 351.3 185 91.4
HanXRQChr10g0318201 Helianthus annuus HOM05D000806 ORTHO05D007429 4.6e-95 351.3 185 91.4
HanXRQChr11g0326821 Helianthus annuus HOM05D000806 ORTHO05D007429 4.6e-95 351.3 185 91.4
HanXRQCPg0580031 Helianthus annuus HOM05D000806 ORTHO05D007429 4.6e-95 351.3 185 91.4
DCAR_032495 Daucus carota HOM05D000806 ORTHO05D007429 2.3e-94 349.0 185 91.4
Duzib198G0003 Durio zibethinus HOM05D000806 ORTHO05D002324 2.3e-94 349.0 182 91.2
Potri.013G162400 Populus trichocarpa HOM05D000806 ORTHO05D007429 5.1e-94 347.8 185 89.7
PGR111G0079 Punica granatum HOM05D000806 ORTHO05D007429 8.6e-94 347.1 185 89.7
MELO3C027107.2 Cucumis melo HOM05D000806 ORTHO05D007429 1.9e-93 345.9 185 90.8
RcHm_v2.0_CPg0502091 Rosa chinensis HOM05D000806 ORTHO05D007429 2.5e-93 345.5 185 90.3
PSO548G0038 Papaver somniferum HOM05D000806 ORTHO05D007429 4.3e-93 344.7 185 88.6
Gohir.A07G163690 Gossypium hirsutum HOM05D000806 ORTHO05D007429 7.3e-93 344.0 185 90.3
RcHm_v2.0_Chr5g0042981 Rosa chinensis HOM05D000806 ORTHO05D007429 9.5e-93 343.6 185 89.7
Lj2P1237T60 Lonicera japonica HOM05D000806 ORTHO05D007429 1.6e-92 342.8 185 89.7
Eucgr.E02608 Eucalyptus grandis HOM05D000806 ORTHO05D007429 2.8e-92 342.0 185 89.2
Peaxi162Scf00021g00088 Petunia axillaris HOM05D000806 ORTHO05D007429 2.0e-90 335.9 185 91.9
ATCG00520 Arabidopsis thaliana HOM05D000806 ORTHO05D007429 1.7e-89 332.8 185 87.6
CARHR282100 Cardamine hirsuta HOM05D000806 ORTHO05D007429 4.9e-89 331.3 185 87.0
Migut.H01166 Erythranthe guttata HOM05D000806 ORTHO05D007429 6.4e-89 330.9 171 93.6
Migut.H01167 Erythranthe guttata HOM05D000806 ORTHO05D007429 6.4e-89 330.9 171 93.6
AL2G20666 Arabidopsis lyrata HOM05D000806 ORTHO05D007429 3.2e-88 328.6 182 87.4
BraSC103t45466Z Brassica rapa HOM05D000806 ORTHO05D007429 1.6e-87 326.2 185 85.4
A06p23190 Brassica napus HOM05D000806 ORTHO05D007429 6.0e-87 324.3 185 84.9
C09p29600 Brassica napus HOM05D000806 ORTHO05D007429 6.0e-87 324.3 185 84.9
C09p40230 Brassica napus HOM05D000806 ORTHO05D007429 6.0e-87 324.3 185 84.9
BraSC25t45866Z Brassica rapa HOM05D000806 ORTHO05D007429 6.0e-87 324.3 185 84.9
BraSC59t46591Z Brassica rapa HOM05D000806 ORTHO05D007429 6.0e-87 324.3 185 84.9
BolC9t56915H Brassica oleracea HOM05D000806 ORTHO05D007429 1.3e-86 323.2 185 84.9
BolSC35t60646H Brassica oleracea HOM05D000806 ORTHO05D007429 3.9e-86 321.6 185 84.3
BolSC35t60750H Brassica oleracea HOM05D000806 ORTHO05D007429 3.9e-86 321.6 185 84.3
BolSC49t61183H Brassica oleracea HOM05D000806 ORTHO05D007429 3.9e-86 321.6 185 84.3
EL10Ac4g09266 Beta vulgaris HOM05D000806 ORTHO05D007429 8.1e-84 313.9 185 83.2
Hund28839 Selenicereus undatus HOM05D000806 ORTHO05D007429 8.9e-83 310.5 182 84.1
BolSC29t60467H Brassica oleracea HOM05D000806 ORTHO05D007429 9.9e-82 307.0 184 80.4
Hund29829 Selenicereus undatus HOM05D000806 ORTHO05D007429 9.9e-82 307.0 182 83.5
Nitab4.5_0007680g0030 Nicotiana tabacum HOM05D000806 ORTHO05D007429 1.6e-79 299.7 182 84.6
Hund28749 Selenicereus undatus HOM05D000806 ORTHO05D007429 2.7e-79 298.9 182 81.9
Hund31110 Selenicereus undatus HOM05D000806 ORTHO05D007429 2.7e-79 298.9 182 81.9
BraSC140t45575Z Brassica rapa HOM05D000806 ORTHO05D007429 1.7e-78 296.2 170 85.3
Thhalv10010960m.g Eutrema salsugineum HOM05D000806 ORTHO05D007429 6.6e-78 294.3 185 80.0
Hund03830 Selenicereus undatus HOM05D000806 ORTHO05D007429 7.3e-77 290.8 182 80.2
HanXRQChr16g0528981 Helianthus annuus HOM05D000806 ORTHO05D007429 1.8e-75 286.2 170 81.8
AUR62004684 Chenopodium quinoa HOM05D000806 ORTHO05D002320 4.5e-74 281.6 158 85.4
SEGI_09545 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 4.5e-74 281.6 185 75.1
Hund28451 Selenicereus undatus HOM05D000806 ORTHO05D007429 9.3e-72 273.9 182 76.4
Lsat_1_v5_gn_9_43721 Lactuca sativa HOM05D000806 ORTHO05D007429 1.0e-70 270.4 185 76.2
Lalb_Chr23g0274521 Lupinus albus HOM05D000806 ORTHO05D007429 1.0e-70 270.4 185 74.6
Hund19837 Selenicereus undatus HOM05D000806 ORTHO05D007429 6.9e-67 257.7 182 72.0
Nn010s41444 Nelumbo nucifera HOM05D000806 ORTHO05D007429 1.2e-66 256.9 185 72.4
Potri.016G094067 Populus trichocarpa HOM05D000806 ORTHO05D007429 1.4e-64 250.0 133 87.2
BraSC25t45848Z Brassica rapa HOM05D000806 ORTHO05D007429 3.2e-64 248.8 141 83.7
Sc03g0009990 Simmondsia chinensis HOM05D000806 ORTHO05D007429 6.0e-63 244.6 130 89.2
HanXRQChr02g0041571 Helianthus annuus HOM05D000806 ORTHO05D007429 2.3e-62 242.7 120 95.8
HanXRQChr10g0284241 Helianthus annuus HOM05D000806 ORTHO05D007429 2.3e-62 242.7 120 95.8
HanXRQChr13g0404911 Helianthus annuus HOM05D000806 ORTHO05D007429 2.3e-62 242.7 120 95.8
Peaxi162Scf00041g00229 Petunia axillaris HOM05D000806 ORTHO05D007429 5.1e-62 241.5 118 98.3
Hund22773 Selenicereus undatus HOM05D000806 ORTHO05D007429 2.1e-60 236.1 175 70.9
TAR633G2212 Trochodendron aralioides HOM05D000890 ORTHO05D000697 1.4e-59 233.4 122 90.2
QL93p1043_0001 Quercus lobata HOM05D000806 ORTHO05D007429 4.0e-59 231.9 119 90.8
HanXRQChr11g0345151 Helianthus annuus HOM05D000806 ORTHO05D007429 9.0e-59 230.7 120 92.5
Sc22g0003430 Simmondsia chinensis HOM05D000806 ORTHO05D007429 1.2e-58 230.3 120 90.8
EL10Ac6g15047 Beta vulgaris HOM05D000806 ORTHO05D002324 1.3e-57 226.9 117 90.6
Gohir.A12G124900 Gossypium hirsutum HOM05D000806 ORTHO05D007429 1.3e-57 226.9 120 90.8
Ah.10g027160 Amaranthus hybridus HOM05D000806 ORTHO05D002324 6.5e-57 224.6 117 89.7
Medtr0002s0680 Medicago truncatula HOM05D000806 ORTHO05D007429 1.1e-56 223.8 186 63.4
Gorai.004G061100 Gossypium raimondii HOM05D000806 ORTHO05D007429 1.4e-56 223.4 132 80.3
Eucgr.I02538 Eucalyptus grandis HOM05D000806 ORTHO05D007429 7.1e-56 221.1 120 87.5
Gorai.011G115400 Gossypium raimondii HOM05D000806 ORTHO05D007429 9.3e-56 220.7 127 83.5
HanXRQChr15g0474091 Helianthus annuus HOM05D000806 ORTHO05D007429 2.7e-55 219.2 120 90.0
BolSC46t61035H Brassica oleracea HOM05D000806 ORTHO05D007429 8.7e-54 214.2 120 86.7
BolSC47t61097H Brassica oleracea HOM05D000806 ORTHO05D007429 8.7e-54 214.2 120 86.7
LjContig00318g0003161 Lotus japonicus HOM05D000806 ORTHO05D007429 1.1e-53 213.8 194 57.2
Haze_07716 Corylus avellana HOM05D000806 ORTHO05D007429 2.5e-53 212.6 124 84.7
AL2G21550 Arabidopsis lyrata HOM05D000806 ORTHO05D007429 5.7e-53 211.5 119 85.7
Gohir.D10G105733 Gossypium hirsutum HOM05D000806 ORTHO05D007429 9.6e-53 210.7 125 80.8
CDE02G2600 Ceratophyllum demersum HOM05D000806 ORTHO05D002320 1.5e-50 203.4 113 84.1
GSVIVG01030619001 Vitis vinifera HOM05D000806 ORTHO05D007429 2.0e-50 203.0 187 61.5
Gohir.A07G166934 Gossypium hirsutum HOM05D000806 ORTHO05D007429 3.4e-50 202.2 106 89.6
Solyc00g500066.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 4.5e-50 201.8 185 61.1
HanXRQChr09g0257581 Helianthus annuus HOM05D000806 ORTHO05D007429 1.0e-49 200.7 110 85.5
Solyc00g500019.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 7.2e-48 194.5 96 99.0
MCO14G322 Micromonas commoda HOM05D000806 ORTHO05D007429 9.3e-48 194.1 178 49.4
Sopen07g012430 Solanum pennellii HOM05D000004 ORTHO05D002324 2.7e-47 192.6 94 98.9
Dinv29307 Davidia involucrata HOM05D001133 ORTHO05D000941 1.3e-46 190.3 97 94.8
Gohir.1Z049999 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.3e-46 190.3 98 91.8
SEGI_10580 Sequoiadendron giganteum HOM05D000580 ORTHO05D001362 1.8e-46 189.9 127 74.0
Dinv26731 Davidia involucrata HOM05D001133 ORTHO05D000941 3.0e-46 189.1 123 79.7
Gohir.D01G102333 Gossypium hirsutum HOM05D000806 ORTHO05D002320 3.9e-46 188.7 98 90.8
SEGI_20028 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 3.9e-46 188.7 115 77.4
SEGI_23528 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 5.1e-46 188.3 119 74.8
BolSC46t61000H Brassica oleracea HOM05D000806 ORTHO05D007429 2.5e-45 186.0 112 79.5
ECA074G0009 Erigeron canadensis HOM05D000806 ORTHO05D002324 4.3e-45 185.3 95 91.6
ECA077G0001 Erigeron canadensis HOM05D000806 ORTHO05D002324 4.3e-45 185.3 95 91.6
Lj2C1239T39 Lonicera japonica HOM05D000806 ORTHO05D002320 7.4e-45 184.5 96 92.7
HanXRQChr08g0210351 Helianthus annuus HOM05D000806 ORTHO05D007429 9.7e-45 184.1 98 88.8
SEGI_09273 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 1.3e-44 183.7 113 77.0
Sabra10G0056300 Salix brachista HOM05D000806 ORTHO05D002320 2.8e-44 182.6 123 76.4
CAN.G1478.9 Capsicum annuum HOM05D000806 ORTHO05D002320 3.7e-44 182.2 120 78.3
Gorai.012G112600 Gossypium raimondii HOM05D000806 ORTHO05D007429 4.8e-44 181.8 186 56.5
Cfa021575 Carpinus fangiana HOM05D000806 ORTHO05D002324 6.3e-44 181.4 120 76.7
QL93p0311_0018 Quercus lobata HOM05D000806 ORTHO05D002320 6.3e-44 181.4 97 86.6
VMungo0586G0001 Vigna mungo HOM05D000806 ORTHO05D007429 6.3e-44 181.4 188 52.7
Oeu062853.1 Olea europaea HOM05D000806 ORTHO05D007429 8.2e-44 181.0 176 59.1
unitig_91.g26508 Utricularia gibba HOM05D000806 ORTHO05D002320 1.1e-43 180.6 129 71.3
Ah.09g227360 Amaranthus hybridus HOM05D000806 ORTHO05D007429 5.3e-43 178.3 98 85.7
EL10As1g23054 Beta vulgaris HOM05D000806 ORTHO05D002324 5.3e-43 178.3 95 87.4
CsaV3_UNG209270 Cucumis sativus L. HOM05D000806 ORTHO05D007429 5.3e-43 178.3 94 91.5
HanXRQChr02g0038641 Helianthus annuus HOM05D000806 ORTHO05D007429 5.3e-43 178.3 120 76.7
SabraPtG0003400 Salix brachista HOM05D000806 ORTHO05D002324 5.3e-43 178.3 120 75.8
Hund31091 Selenicereus undatus HOM05D000806 ORTHO05D007429 5.3e-43 178.3 182 54.4
Medtr4g034770 Medicago truncatula HOM05D000806 ORTHO05D002320 2.0e-42 176.4 184 48.9
Phvul.002G278112 Phaseolus vulgaris HOM05D000806 ORTHO05D007429 2.0e-42 176.4 187 52.9
Ah.10g027380 Amaranthus hybridus HOM05D000806 ORTHO05D007429 2.6e-42 176.0 94 87.2
HanXRQChr02g0044901 Helianthus annuus HOM05D000806 ORTHO05D007429 4.5e-42 175.3 121 73.6
Ah.10g027510 Amaranthus hybridus HOM05D000806 ORTHO05D002324 1.0e-41 174.1 95 85.3
vmacro22411 Vaccinium macrocarpon HOM05D000806 ORTHO05D007429 2.2e-41 172.9 90 88.9
RhsimPtG0003100 Rhododendron simsii HOM05D000806 ORTHO05D002324 5.0e-41 171.8 103 77.7
Solyc10g045220.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 5.0e-41 171.8 117 75.2
Ah.03g144240 Amaranthus hybridus HOM05D000806 ORTHO05D002324 1.4e-40 170.2 92 85.9
Nitab4.5_0009663g0060 Nicotiana tabacum HOM05D000806 ORTHO05D007429 1.4e-40 170.2 131 66.4
EL10Ac9g20703 Beta vulgaris HOM05D000806 ORTHO05D007429 4.2e-40 168.7 120 67.5
Gorai.004G277000 Gossypium raimondii HOM05D000806 ORTHO05D007429 7.2e-40 167.9 87 92.0
Gohir.D11G225901 Gossypium hirsutum HOM05D000806 ORTHO05D007429 1.4e-38 163.7 94 79.8
Solyc04g039810.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 2.3e-38 162.9 167 58.1
Gohir.1Z050266 Gossypium hirsutum HOM05D000806 ORTHO05D002320 3.3e-37 159.1 89 83.1
SMO086G0044 Selaginella moellendorffii HOM05D000806 ORTHO05D007429 7.4e-37 157.9 174 49.4
Gohir.D04G129256 Gossypium hirsutum HOM05D000806 ORTHO05D002320 3.7e-36 155.6 88 85.2
Gorai.007G243500 Gossypium raimondii HOM05D000806 ORTHO05D007429 1.2e-34 150.6 99 73.7
Nitab4.5_0002181g0020 Nicotiana tabacum HOM05D006976 ORTHO05D008761 1.4e-30 137.1 156 54.5
BraA10t43926Z Brassica rapa HOM05D000806 ORTHO05D007429 3.9e-30 135.6 81 80.2
Hund27898 Selenicereus undatus HOM05D000806 ORTHO05D002324 2.6e-29 132.9 78 80.8
Hund29706 Selenicereus undatus HOM05D000806 ORTHO05D002324 2.6e-29 132.9 78 80.8
Hund29710 Selenicereus undatus HOM05D000806 ORTHO05D002324 2.6e-29 132.9 78 80.8
Hund29827 Selenicereus undatus HOM05D000806 ORTHO05D002324 2.6e-29 132.9 78 80.8
Hund29835 Selenicereus undatus HOM05D000806 ORTHO05D002324 2.6e-29 132.9 78 80.8
Nn3g16863 Nelumbo nucifera HOM05D000806 ORTHO05D007429 7.4e-29 131.3 70 85.7
Nitab4.5_0004697g0020 Nicotiana tabacum HOM05D000806 ORTHO05D007429 7.4e-29 131.3 125 60.0
Hund28893 Selenicereus undatus HOM05D000806 ORTHO05D002324 7.4e-29 131.3 77 80.5
Hund29727 Selenicereus undatus HOM05D000806 ORTHO05D002324 7.4e-29 131.3 77 80.5
Hund29858 Selenicereus undatus HOM05D000806 ORTHO05D002324 7.4e-29 131.3 77 80.5
Hund29866 Selenicereus undatus HOM05D000806 ORTHO05D002324 7.4e-29 131.3 77 80.5
Hund30695 Selenicereus undatus HOM05D000806 ORTHO05D002324 7.4e-29 131.3 77 80.5
EL10As15g24119 Beta vulgaris HOM05D000806 ORTHO05D002320 1.6e-26 123.6 96 64.6
Lalb_Chr25g0282881 Lupinus albus HOM05D000806 ORTHO05D007429 9.4e-24 114.4 64 87.5
Hund10571 Selenicereus undatus HOM05D000806 ORTHO05D007429 9.4e-24 114.4 126 52.4
SEGI_39120 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 8.0e-23 111.3 70 71.4
Sed0021403 Sechium edule HOM05D000806 ORTHO05D002324 1.4e-22 110.5 61 86.9
Solyc05g016120.2 Solanum lycopersicum HOM05D001387 ORTHO05D001250 1.8e-22 110.2 111 55.0
arahy.Tifrunner.gnm1.ann1.YJGE71 Arachis hypogaea HOM05D000806 ORTHO05D007429 1.2e-21 107.5 62 80.6
FAN12G3683 Fragaria x ananassa HOM05D000681 ORTHO05D035426 3.3e-21 105.9 91 61.5
HanXRQChr11g0337941 Helianthus annuus HOM05D000806 ORTHO05D007429 4.4e-21 105.5 74 66.2
Nn1g07435 Nelumbo nucifera HOM05D000806 ORTHO05D007429 4.4e-21 105.5 82 65.9
Nitab4.5_0010235g0030 Nicotiana tabacum HOM05D000806 ORTHO05D007429 5.7e-21 105.1 78 67.9
CDE02G0843 Ceratophyllum demersum HOM05D001966 ORTHO05D007227 1.7e-20 103.6 62 77.4
HanXRQChr09g0267831 Helianthus annuus HOM05D000806 ORTHO05D007429 1.7e-20 103.6 60 80.0
arahy.Tifrunner.gnm1.ann1.Y8HZNS Arachis hypogaea HOM05D000806 ORTHO05D002320 2.2e-20 103.2 62 82.3
BolC9t55821H Brassica oleracea HOM05D000806 ORTHO05D007429 4.8e-20 102.1 60 78.3
BolSC29t60589H Brassica oleracea HOM05D000806 ORTHO05D007429 8.2e-20 101.3 60 78.3
MD15G1388400 Malus domestica HOM05D000806 ORTHO05D007429 8.2e-20 101.3 62 79.0
BolC9t58296H Brassica oleracea HOM05D000806 ORTHO05D007429 1.1e-19 100.9 64 78.1
Nn021s41539 Nelumbo nucifera HOM05D000806 ORTHO05D007429 3.1e-19 99.4 118 49.2
ATR1137G001 Amborella trichopoda HOM05D000806 ORTHO05D007429 5.3e-19 98.6 55 87.3
arahy.Tifrunner.gnm1.ann1.X4SEM1 Arachis hypogaea HOM05D000540 ORTHO05D000681 9.1e-19 97.8 61 80.3
FAN17G0466 Fragaria x ananassa HOM05D000806 ORTHO05D007429 3.5e-18 95.9 93 54.8
Ah.10g027920 Amaranthus hybridus HOM05D000806 ORTHO05D002324 5.9e-18 95.1 53 83.0
Ah.10g028630 Amaranthus hybridus HOM05D000806 ORTHO05D002324 5.9e-18 95.1 53 83.0
EL10As15g24117 Beta vulgaris HOM05D000806 ORTHO05D007429 2.5e-16 89.7 52 78.8
TAR371G0631 Trochodendron aralioides HOM05D000806 ORTHO05D007429 4.2e-16 89.0 49 87.8
CAN.G1163.7 Capsicum annuum HOM05D000806 ORTHO05D007429 5.5e-16 88.6 57 82.5
Hund08021 Selenicereus undatus HOM05D002432 ORTHO05D000695 2.2e-12 76.6 49 75.5
SEGI_02123 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 6.3e-12 75.1 49 73.5
SEGI_16956 Sequoiadendron giganteum HOM05D000216 ORTHO05D001131 9.1e-11 71.2 49 73.5
Sed0010807 Sechium edule HOM05D000806 ORTHO05D002320 1.2e-10 70.9 33 93.9
Sed0026664 Sechium edule HOM05D000806 ORTHO05D002320 1.2e-10 70.9 33 93.9
SGA_v2.0_scaffold213G42216 Striga asiatica HOM05D000806 ORTHO05D007429 2.0e-10 70.1 36 88.9
ClCG04G004710 Citrullus lanatus HOM05D001966 ORTHO05D007429 2.9e-09 66.2 32 93.8
Migut.H00990 Erythranthe guttata HOM05D000806 ORTHO05D007429 1.1e-08 64.3 36 88.9
FAN07G1499 Fragaria x ananassa HOM05D000806 ORTHO05D007429 1.4e-06 57.4 54 53.7


User provided reference genes

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