Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G296.11 Capsicum annuum HOM05D000537 ORTHO05D000415 1.3e-67 259.6 131 100.0
Solyc06g051810.4 Solanum lycopersicum HOM05D000537 ORTHO05D000415 1.9e-15 86.3 51 88.2
Sopen06g017820 Solanum pennellii HOM05D000537 ORTHO05D000415 1.9e-15 86.3 51 88.2
PGSC0003DMG400024388 Solanum tuberosum HOM05D000537 ORTHO05D000415 1.9e-15 86.3 51 88.2
CAN.G169.1 Capsicum annuum HOM05D000537 ORTHO05D000415 2.5e-15 85.9 51 88.2
Nitab4.5_0000042g0040 Nicotiana tabacum HOM05D000537 ORTHO05D000415 5.7e-15 84.7 51 86.3
Nitab4.5_0008780g0010 Nicotiana tabacum HOM05D000537 ORTHO05D000415 5.7e-15 84.7 51 86.3
Peaxi162Scf00658g00840 Petunia axillaris HOM05D000537 ORTHO05D000415 7.4e-15 84.3 51 84.3
PGSC0003DMG400023431 Solanum tuberosum HOM05D000537 ORTHO05D000415 1.9e-10 69.7 51 72.5
CAN.G1013.30 Capsicum annuum HOM05D000537 ORTHO05D000415 4.2e-10 68.6 51 70.6
Nitab4.5_0001097g0010 Nicotiana tabacum HOM05D000537 ORTHO05D000415 1.2e-09 67.0 51 70.6
Sopen05g032910 Solanum pennellii HOM05D000537 ORTHO05D000415 1.2e-09 67.0 51 70.6
Atru.chr12.430 Acer truncatum HOM05D000537 ORTHO05D000415 3.5e-09 65.5 49 69.4
Oeu048234.1 Olea europaea HOM05D000537 ORTHO05D000415 3.5e-09 65.5 50 70.0
MD07G1200200 Malus domestica HOM05D000537 ORTHO05D000415 4.6e-09 65.1 49 69.4
Potri.010G202700 Populus trichocarpa HOM05D000537 ORTHO05D000415 4.6e-09 65.1 51 64.7
CAN.G383.14 Capsicum annuum HOM05D000537 ORTHO05D000415 6.1e-09 64.7 38 84.2
Nitab4.5_0008565g0030 Nicotiana tabacum HOM05D000537 ORTHO05D000415 6.1e-09 64.7 51 68.6
Peaxi162Scf00886g00015 Petunia axillaris HOM05D000537 ORTHO05D000415 6.1e-09 64.7 53 64.2
Prupe.2G236900 Prunus persica HOM05D000537 ORTHO05D000415 6.1e-09 64.7 49 67.3
Solyc05g054420.4 Solanum lycopersicum HOM05D000537 ORTHO05D000415 6.1e-09 64.7 51 68.6
GSVIVG01016528001 Vitis vinifera HOM05D000537 ORTHO05D000415 7.9e-09 64.3 49 67.3
Glyma.02G248400 Glycine max HOM05D000537 ORTHO05D000415 1.0e-08 63.9 51 66.7
Hund13771 Selenicereus undatus HOM05D000537 ORTHO05D000415 1.0e-08 63.9 51 62.7
Sc10g0001670 Simmondsia chinensis HOM05D000537 ORTHO05D000415 1.0e-08 63.9 51 60.8
Dinv03039 Davidia involucrata HOM05D000537 ORTHO05D000415 1.3e-08 63.5 49 67.3
Glyma.14G068100 Glycine max HOM05D000537 ORTHO05D000415 1.3e-08 63.5 51 66.7
MD01G1135500 Malus domestica HOM05D000537 ORTHO05D000415 1.3e-08 63.5 49 67.3
Migut.E00827 Erythranthe guttata HOM05D000537 ORTHO05D000415 1.8e-08 63.2 49 67.3
vmacro07181 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 1.8e-08 63.2 51 66.7
Lalb_Chr17g0346241 Lupinus albus HOM05D000537 ORTHO05D000415 2.3e-08 62.8 51 66.7
Psat5g123840 Pisum sativum HOM05D000537 ORTHO05D000415 2.3e-08 62.8 51 66.7
Sabra08G0041400 Salix brachista HOM05D000537 ORTHO05D000415 2.3e-08 62.8 51 64.7
QL08p059601 Quercus lobata HOM05D000537 ORTHO05D000415 3.0e-08 62.4 49 65.3
Oeu011114.2 Olea europaea HOM05D000537 ORTHO05D000415 3.9e-08 62.0 51 68.6
Sc14g0004690 Simmondsia chinensis HOM05D000537 ORTHO05D000415 3.9e-08 62.0 51 60.8
Gohir.A05G349100 Gossypium hirsutum HOM05D000537 ORTHO05D000415 5.1e-08 61.6 49 67.3
FvH4_7g22690 Fragaria vesca HOM05D000537 ORTHO05D000415 6.7e-08 61.2 49 65.3
FAN01G1116 Fragaria x ananassa HOM05D000537 ORTHO05D000415 6.7e-08 61.2 49 65.3
FAN01G2968 Fragaria x ananassa HOM05D000537 ORTHO05D000415 6.7e-08 61.2 49 65.3
FAN03G0173 Fragaria x ananassa HOM05D000537 ORTHO05D000415 6.7e-08 61.2 49 65.3
FAN06G1487 Fragaria x ananassa HOM05D000537 ORTHO05D000415 6.7e-08 61.2 49 65.3
FAN06G1934 Fragaria x ananassa HOM05D000537 ORTHO05D000415 6.7e-08 61.2 49 65.3
FAN10G0949 Fragaria x ananassa HOM05D000537 ORTHO05D000415 6.7e-08 61.2 49 65.3
Ciclev10030937m.g Citrus clementina HOM05D000537 ORTHO05D000415 8.7e-08 60.8 49 63.3
QL04p025840 Quercus lobata HOM05D000537 ORTHO05D000415 8.7e-08 60.8 49 63.3
Rhsim03G0129800 Rhododendron simsii HOM05D000537 ORTHO05D000415 8.7e-08 60.8 49 67.3
CSS0045683 Camellia sinensis var. sinensis HOM05D000537 ORTHO05D000415 1.1e-07 60.5 49 65.3
Gorai.012G071000 Gossypium raimondii HOM05D000537 ORTHO05D000415 1.1e-07 60.5 49 67.3
QL03p023906 Quercus lobata HOM05D000537 ORTHO05D000415 1.5e-07 60.1 49 63.3
QL10p052528 Quercus lobata HOM05D000537 ORTHO05D000415 1.5e-07 60.1 49 63.3
QL12p000692 Quercus lobata HOM05D000537 ORTHO05D000415 1.5e-07 60.1 49 63.3
QL93p0157_0001 Quercus lobata HOM05D000537 ORTHO05D000415 1.5e-07 60.1 49 63.3
RcHm_v2.0_Chr1g0367771 Rosa chinensis HOM05D000537 ORTHO05D000415 1.5e-07 60.1 49 63.3
Sabra15G0062600 Salix brachista HOM05D000537 ORTHO05D000415 1.5e-07 60.1 51 62.7
TPR.G5014 Trifolium pratense HOM05D000537 ORTHO05D000415 1.5e-07 60.1 51 62.7
DCAR_019107 Daucus carota HOM05D000537 ORTHO05D000415 1.9e-07 59.7 51 60.8
Duzib114G0977 Durio zibethinus HOM05D000537 ORTHO05D000415 1.9e-07 59.7 49 67.3
Glyma.16G133400 Glycine max HOM05D000537 ORTHO05D000415 1.9e-07 59.7 51 62.7
Medtr3g067815 Medicago truncatula HOM05D000537 ORTHO05D000415 1.9e-07 59.7 51 64.7
Cfa001460 Carpinus fangiana HOM05D000537 ORTHO05D000415 2.5e-07 59.3 49 63.3
Haze_17080 Corylus avellana HOM05D000537 ORTHO05D000415 2.5e-07 59.3 49 63.3
Dinv26027 Davidia involucrata HOM05D000537 ORTHO05D000415 2.5e-07 59.3 51 64.7
TPR.G15839 Trifolium pratense HOM05D000537 ORTHO05D000415 2.5e-07 59.3 51 64.7
Cc02_g07720 Coffea canephora HOM05D000537 ORTHO05D000415 3.3e-07 58.9 49 65.3
COL.COLO4_15061 Corchorus olitorius HOM05D000537 ORTHO05D000415 3.3e-07 58.9 49 61.2
Gohir.D06G172500 Gossypium hirsutum HOM05D000537 ORTHO05D000415 3.3e-07 58.9 49 65.3
Gorai.010G201400 Gossypium raimondii HOM05D000537 ORTHO05D000415 3.3e-07 58.9 49 65.3
Lj1C939T2 Lonicera japonica HOM05D000537 ORTHO05D000415 3.3e-07 58.9 49 63.3
Glyma.11G219200 Glycine max HOM05D000537 ORTHO05D000415 4.3e-07 58.5 51 58.8
Glyma.18G038300 Glycine max HOM05D000537 ORTHO05D000415 4.3e-07 58.5 51 58.8
Sed0028116 Sechium edule HOM05D000537 ORTHO05D000415 4.3e-07 58.5 51 60.8
ECA238G2608 Erigeron canadensis HOM05D000537 ORTHO05D000415 5.7e-07 58.2 48 60.4
Phvul.008G232300 Phaseolus vulgaris HOM05D000537 ORTHO05D000415 5.7e-07 58.2 51 60.8
VMungo1383G2212 Vigna mungo HOM05D000537 ORTHO05D000415 5.7e-07 58.2 51 58.8
AUR62012099 Chenopodium quinoa HOM05D000537 ORTHO05D000415 7.4e-07 57.8 51 54.9
AUR62039367 Chenopodium quinoa HOM05D000537 ORTHO05D000415 7.4e-07 57.8 51 54.9
HanXRQChr02g0049151 Helianthus annuus HOM05D000537 ORTHO05D000415 7.4e-07 57.8 48 60.4
Sed0022378 Sechium edule HOM05D000537 ORTHO05D000415 7.4e-07 57.8 51 58.8
Thecc.10G040300 Theobroma cacao HOM05D000537 ORTHO05D000415 7.4e-07 57.8 49 63.3
Migut.D02089 Erythranthe guttata HOM05D000537 ORTHO05D000415 9.7e-07 57.4 49 59.2
Glyma.04G148500 Glycine max HOM05D000537 ORTHO05D000415 9.7e-07 57.4 51 56.9
Gohir.A06G167100 Gossypium hirsutum HOM05D000537 ORTHO05D000415 9.7e-07 57.4 49 63.3
Lj6g0012433 Lotus japonicus HOM05D000537 ORTHO05D000415 9.7e-07 57.4 51 62.7
VMungo0647G2364 Vigna mungo HOM05D000537 ORTHO05D000415 9.7e-07 57.4 51 60.8
arahy.Tifrunner.gnm1.ann1.J5AP2X Arachis hypogaea HOM05D000537 ORTHO05D000415 1.3e-06 57.0 51 60.8
MSTRG.17830 Avicennia marina HOM05D000537 ORTHO05D000415 1.3e-06 57.0 49 59.2
Ca_05889_v3 Cicer arietinum L. HOM05D000537 ORTHO05D000415 1.3e-06 57.0 50 62.0
Ciclev10000571m.g Citrus clementina HOM05D000537 ORTHO05D000415 1.3e-06 57.0 51 56.9
Lalb_Chr20g0116931 Lupinus albus HOM05D000537 ORTHO05D000415 1.3e-06 57.0 50 58.0
Manes.07G117100 Manihot esculenta HOM05D000537 ORTHO05D000415 1.3e-06 57.0 49 57.1
Phvul.001G232400 Phaseolus vulgaris HOM05D000537 ORTHO05D000415 1.3e-06 57.0 51 54.9
SGA_v2.0_scaffold221G42664 Striga asiatica HOM05D000537 ORTHO05D000415 1.3e-06 57.0 49 63.3
Actinidia07738 Actinidia chinensis HOM05D000537 ORTHO05D000415 1.6e-06 56.6 49 61.2
arahy.Tifrunner.gnm1.ann1.PPMM0K Arachis hypogaea HOM05D000537 ORTHO05D000415 1.6e-06 56.6 51 58.8
TPR.G3474 Trifolium pratense HOM05D000537 ORTHO05D000415 1.6e-06 56.6 51 60.8
Cpa.g.sc1.418 Carica papaya HOM05D000537 ORTHO05D000415 2.2e-06 56.2 49 57.1
Eucgr.G02937 Eucalyptus grandis HOM05D000537 ORTHO05D000415 2.2e-06 56.2 51 58.8
SHI22757 Sapria himalayana HOM05D000537 ORTHO05D000415 2.2e-06 56.2 46 63.0
HanXRQChr07g0201371 Helianthus annuus HOM05D000537 ORTHO05D000415 2.8e-06 55.8 48 58.3
Lj6g0006696 Lotus japonicus HOM05D000537 ORTHO05D000415 2.8e-06 55.8 51 64.7
CiPaw.02G184800 Carya illinoinensis HOM05D000537 ORTHO05D000415 3.7e-06 55.5 49 59.2
LjContig00141g0012250 Lotus japonicus HOM05D000537 ORTHO05D000415 4.8e-06 55.1 51 60.8
CANSAT56G1542 Cannabis sativa HOM05D000537 ORTHO05D000415 6.3e-06 54.7 48 62.5
Hma1.2p1_1542F.1_g289740 Hydrangea macrophylla HOM05D000537 ORTHO05D000415 6.3e-06 54.7 51 51.0
Glyma.08G269000 Glycine max HOM05D000537 ORTHO05D000415 8.2e-06 54.3 51 56.9


User provided reference genes

Program Settings