Gene: PGSC0003DMG400024388
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG400024388
- Transcript Identifier PGSC0003DMT400062666
- Gene Type Coding gene
- Location ST4.03ch06 : 24848940-24858336 : positive
Gene Family Information
- ID HOM05D000537
- #Genes/#Species 1018/95
- Phylogenetic origin
- ID ORTHO05D000415
- #Genes/#Species 961/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pacid 37450492
- id PGSC0003DMG400024388.v4.03
- uniprot M1C9D8
Descriptions
- Description XH/XS domain-containing protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031047 | IEA | GOA Database | gene silencing by RNA | |
| GO:0031047 | IEA | InterPro | gene silencing by RNA | |
| GO:0006306 | ISO | PLAZA Integrative Orthology | DNA methylation | AT3G48670 |
| GO:0080188 | ISO | PLAZA Integrative Orthology | gene silencing by RNA-directed DNA methylation | AT3G12550 |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT3G48670 |
| GO:0010569 | ISO | PLAZA Integrative Orthology | regulation of double-strand break repair via homologous recombination | AT3G48670 |
| GO:0006342 | ISO | PLAZA Integrative Orthology | chromatin silencing | AT3G48670 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G48670 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT4G01180 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.5.1.4 | Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.regulatory protein (IDN/IDP) |