Gene: SGA_v2.0_scaffold221G42664

General Information

Structural Information

Species Striga asiatica
Gene Identifier SGA_v2.0_scaffold221G42664
Transcript Identifier SGA_v2.0_scaffold221T42664
Gene Type Coding gene
Location scaffold221 : 104795-110255 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000537
#Genes/#Species 1018/95
Phylogenetic origin

ID ORTHO05D000415
#Genes/#Species 961/95
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

Descriptions

Short descriptions
Ortholog descriptions

product XH/XS domain-containing family protein

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0031047	IEA	InterPro	gene silencing by RNA
GO:0006306	ISO	PLAZA Integrative Orthology	DNA methylation	AT3G48670
GO:0080188	ISO	PLAZA Integrative Orthology	gene silencing by RNA-directed DNA methylation	AT3G12550
GO:0046686	ISO	PLAZA Integrative Orthology	response to cadmium ion	AT3G48670
GO:0010569	ISO	PLAZA Integrative Orthology	regulation of double-strand break repair via homologous recombination	AT3G48670
GO:0006342	ISO	PLAZA Integrative Orthology	chromatin silencing	AT3G48670

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT3G48670

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR005380	XS domain
IPR038588	XS domain superfamily
IPR005379	Uncharacterised domain XH
IPR005381	Zinc finger-XS domain

Mapman id	Description
12.5.1.4	Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.regulatory protein (IDN/IDP)