Gene: Sopen05g032910
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen05g032910
- Transcript Identifier Sopen05g032910.1
- Gene Type Coding gene
- Location Spenn-ch05 : 76334598-76341791 : negative
Gene Family Information
- ID HOM05D000537
- #Genes/#Species 1018/95
- Phylogenetic origin
- ID ORTHO05D000415
- #Genes/#Species 961/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen05g032910.1
Descriptions
- Description Encodes IDN2 (INVOLVED IN DE NOVO 2), a double-stranded RNA-binding protein involved in de novo methylation and small interfering RNA (siRNA)-mediated maintenance methylation. IND2 is a component of the RNA-directed DNA methylation pathway. | INVOLVED IN DE NOVO 2 (IDN2) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: response to cadmium ion, chromatin silencing, DNA methylation | LOCATED IN: cellular_component unknown | EXPRESSED IN: root | CONTAINS InterPro DOMAIN/s: Domain of unknown function XS , Domain of unknown function XH , Domain of unknown function, putative Zinc finger, XS/XH | BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031047 | IEA | InterPro | gene silencing by RNA |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.5.1.4 | Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.regulatory protein (IDN/IDP) |