Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G275.6 Capsicum annuum HOM05D000104 ORTHO05D031620 2.2e-99 365.9 227 100.0
Sopen08g023150 Solanum pennellii HOM05D000104 ORTHO05D004363 6.1e-33 145.2 89 84.3
Nitab4.5_0001131g0010 Nicotiana tabacum HOM05D000104 ORTHO05D004363 1.0e-32 144.4 89 84.3
Nitab4.5_0002482g0020 Nicotiana tabacum HOM05D000104 ORTHO05D004363 1.0e-32 144.4 89 84.3
Peaxi162Scf00213g01724 Petunia axillaris HOM05D000104 ORTHO05D004363 3.0e-32 142.9 89 83.1
Solyc08g074500.2 Solanum lycopersicum HOM05D000104 ORTHO05D004363 3.0e-32 142.9 89 83.1
MSTRG.11830 Avicennia marina HOM05D000104 ORTHO05D004363 4.8e-30 135.6 89 76.4
SGA_v2.0_scaffold269G46291 Striga asiatica HOM05D000104 ORTHO05D004363 4.8e-30 135.6 89 77.5
Dinv09442 Davidia involucrata HOM05D000104 ORTHO05D004363 8.3e-30 134.8 89 73.0
Migut.A00510 Erythranthe guttata HOM05D000104 ORTHO05D004363 1.4e-29 134.0 89 75.3
SGA_v2.0_scaffold27G11711 Striga asiatica HOM05D000104 ORTHO05D004363 1.8e-29 133.7 89 75.3
Duzib128G0660 Durio zibethinus HOM05D000104 ORTHO05D004363 3.1e-29 132.9 89 71.9
SalBow4G3014 Salvia bowleyana HOM05D000104 ORTHO05D004363 3.1e-29 132.9 89 75.3
Oeu026040.2 Olea europaea HOM05D000104 ORTHO05D004363 5.4e-29 132.1 89 73.0
QL09p044755 Quercus lobata HOM05D000104 ORTHO05D004363 5.4e-29 132.1 89 74.2
Thecc.05G236400 Theobroma cacao HOM05D000104 ORTHO05D004363 5.4e-29 132.1 89 71.9
GSVIVG01019359001 Vitis vinifera HOM05D000104 ORTHO05D004363 5.4e-29 132.1 89 71.9
COL.COLO4_33474 Corchorus olitorius HOM05D000104 ORTHO05D004363 9.1e-29 131.3 89 70.8
Oeu007492.1 Olea europaea HOM05D000104 ORTHO05D004363 9.1e-29 131.3 89 70.8
Duzib177G0255 Durio zibethinus HOM05D000104 ORTHO05D004363 1.2e-28 131.0 89 73.0
Lalb_Chr01g0000141 Lupinus albus HOM05D000104 ORTHO05D004363 3.5e-28 129.4 89 71.9
Actinidia03314 Actinidia chinensis HOM05D000104 ORTHO05D004363 4.5e-28 129.0 89 69.7
Ca_19676_v3 Cicer arietinum L. HOM05D000104 ORTHO05D004363 4.5e-28 129.0 89 70.8
Cc11_g04400 Coffea canephora HOM05D000104 ORTHO05D004363 5.9e-28 128.6 89 70.8
TPR.G31923 Trifolium pratense HOM05D000104 ORTHO05D004363 5.9e-28 128.6 89 70.8
FvH4_3g46101 Fragaria vesca HOM05D000104 ORTHO05D004363 7.7e-28 128.3 89 68.5
FAN16G0934 Fragaria x ananassa HOM05D000104 ORTHO05D004363 7.7e-28 128.3 89 68.5
FAN25G2034 Fragaria x ananassa HOM05D000104 ORTHO05D004363 7.7e-28 128.3 89 68.5
RcHm_v2.0_Chr5g0084181 Rosa chinensis HOM05D000104 ORTHO05D004363 7.7e-28 128.3 89 68.5
FAN11G0644 Fragaria x ananassa HOM05D000104 ORTHO05D004363 1.0e-27 127.9 89 68.5
Manes.08G155800 Manihot esculenta HOM05D000104 ORTHO05D004363 1.0e-27 127.9 89 69.7
Sed0011777 Sechium edule HOM05D000104 ORTHO05D004363 1.0e-27 127.9 89 70.8
PGR083G0814 Punica granatum HOM05D000104 ORTHO05D004363 1.3e-27 127.5 89 69.7
vmacro00212 Vaccinium macrocarpon HOM05D000104 ORTHO05D004363 1.3e-27 127.5 89 69.7
Glyma.12G002300 Glycine max HOM05D000104 ORTHO05D004363 1.7e-27 127.1 89 69.7
Ciclev10030472m.g Citrus clementina HOM05D000104 ORTHO05D004363 2.2e-27 126.7 89 69.7
Eucgr.D01125 Eucalyptus grandis HOM05D000104 ORTHO05D004363 2.2e-27 126.7 89 69.7
Glyma.09G234400 Glycine max HOM05D000104 ORTHO05D004363 2.2e-27 126.7 89 68.5
Medtr4g035100 Medicago truncatula HOM05D000104 ORTHO05D004363 2.2e-27 126.7 89 69.7
Psat7g148080 Pisum sativum HOM05D000104 ORTHO05D004363 2.2e-27 126.7 89 69.7
Sabra13G0059700 Salix brachista HOM05D000104 ORTHO05D004363 2.2e-27 126.7 89 69.7
MD03G1000900 Malus domestica HOM05D000104 ORTHO05D004363 2.9e-27 126.3 89 69.7
Lj3g0018732 Lotus japonicus HOM05D000104 ORTHO05D004363 3.8e-27 125.9 89 68.5
Prupe.6G000100 Prunus persica HOM05D000104 ORTHO05D004363 3.8e-27 125.9 89 68.5
arahy.Tifrunner.gnm1.ann1.64GWQS Arachis hypogaea HOM05D000104 ORTHO05D004363 5.0e-27 125.6 89 67.4
ECA240G3782 Erigeron canadensis HOM05D000104 ORTHO05D004363 5.0e-27 125.6 89 69.7
VMungo1127G2256 Vigna mungo HOM05D000104 ORTHO05D004363 5.0e-27 125.6 89 68.5
Atru.chr2.1616 Acer truncatum HOM05D000104 ORTHO05D004363 6.5e-27 125.2 89 67.4
CSS0023365 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D004363 6.5e-27 125.2 89 69.7
Nn3g17003 Nelumbo nucifera HOM05D000104 ORTHO05D004363 6.5e-27 125.2 89 68.5
Potri.013G068400 Populus trichocarpa HOM05D000104 ORTHO05D004363 6.5e-27 125.2 89 68.5
FAN21G1945 Fragaria x ananassa HOM05D000104 ORTHO05D004363 8.5e-27 124.8 89 67.4
Gorai.013G197700 Gossypium raimondii HOM05D000104 ORTHO05D004363 8.5e-27 124.8 89 67.4
HanXRQChr03g0082351 Helianthus annuus HOM05D000104 ORTHO05D004363 8.5e-27 124.8 89 67.4
ClCG05G011380 Citrullus lanatus HOM05D000104 ORTHO05D004363 1.1e-26 124.4 89 68.5
MELO3C020235.2 Cucumis melo HOM05D000104 ORTHO05D004363 1.1e-26 124.4 89 68.5
Gohir.A13G159800 Gossypium hirsutum HOM05D000104 ORTHO05D004363 1.1e-26 124.4 89 66.3
Phvul.011G002900 Phaseolus vulgaris HOM05D000104 ORTHO05D004363 1.1e-26 124.4 147 49.0
CDE06G1340 Ceratophyllum demersum HOM05D000104 ORTHO05D004363 1.5e-26 124.0 89 69.7
CsaV3_3G021060 Cucumis sativus L. HOM05D000104 ORTHO05D004363 1.5e-26 124.0 89 68.5
CsaV3_4G017750 Cucumis sativus L. HOM05D000104 ORTHO05D004363 1.5e-26 124.0 89 68.5
CiPaw.09G169600 Carya illinoinensis HOM05D000104 ORTHO05D004363 1.9e-26 123.6 89 68.5
Ah.14g089210 Amaranthus hybridus HOM05D000104 ORTHO05D004363 2.5e-26 123.2 89 69.7
AUR62014777 Chenopodium quinoa HOM05D000104 ORTHO05D004363 2.5e-26 123.2 89 70.8
Gohir.D13G165000 Gossypium hirsutum HOM05D000104 ORTHO05D004363 2.5e-26 123.2 89 67.4
AUR62016963 Chenopodium quinoa HOM05D000104 ORTHO05D004363 3.2e-26 122.9 89 69.7
PGSC0003DMG400029599 Solanum tuberosum HOM05D000104 ORTHO05D004363 5.5e-26 122.1 71 88.7
TWI32G0549 Tripterygium wilfordii HOM05D000104 ORTHO05D004363 9.4e-26 121.3 89 67.4
CAN.G195.21 Capsicum annuum HOM05D000104 ORTHO05D004363 1.2e-25 120.9 67 91.0
Lsat_1_v5_gn_5_59321 Lactuca sativa HOM05D000104 ORTHO05D004363 1.2e-25 120.9 89 66.3
Carub.0005s2087 Capsella rubella HOM05D000104 ORTHO05D004363 2.1e-25 120.2 89 64.0
MD11G1000100 Malus domestica HOM05D000104 ORTHO05D004363 2.1e-25 120.2 89 65.2
Sp5g08110 Schrenkiella parvula HOM05D000104 ORTHO05D004363 2.1e-25 120.2 89 65.2
Aa31sc392G40 Aethionema arabicum HOM05D000104 ORTHO05D004363 2.7e-25 119.8 89 65.2
DCAR_002184 Daucus carota HOM05D007440 ORTHO05D004363 2.7e-25 119.8 89 66.3
Thhalv10010052m.g Eutrema salsugineum HOM05D000104 ORTHO05D004363 6.1e-25 118.6 89 64.0
Lj7C413G9 Lonicera japonica HOM05D000104 ORTHO05D004363 6.1e-25 118.6 83 71.1
A09p47280 Brassica napus HOM05D000104 ORTHO05D004363 8.0e-25 118.2 89 62.9
C08p29510 Brassica napus HOM05D000104 ORTHO05D004363 8.0e-25 118.2 89 62.9
BolC8t50557H Brassica oleracea HOM05D000104 ORTHO05D004363 8.0e-25 118.2 89 62.9
BraA09t40189Z Brassica rapa HOM05D000104 ORTHO05D004363 8.0e-25 118.2 89 62.9
CARHR164210 Cardamine hirsuta HOM05D000104 ORTHO05D004363 8.0e-25 118.2 89 64.0
Hund23685 Selenicereus undatus HOM05D000104 ORTHO05D004363 8.0e-25 118.2 89 68.5
Sc05g0007890 Simmondsia chinensis HOM05D000104 ORTHO05D004363 1.0e-24 117.9 89 65.2
AL5G35320 Arabidopsis lyrata HOM05D000104 ORTHO05D004363 1.4e-24 117.5 89 64.0
AT3G54280 Arabidopsis thaliana HOM05D000104 ORTHO05D004363 1.4e-24 117.5 89 64.0
HPP92_015726 Vanilla planifolia HOM05D000104 ORTHO05D004363 1.8e-24 117.1 89 64.0
Zm00001eb297280 Zea mays HOM05D000104 ORTHO05D004363 2.3e-24 116.7 89 67.4
ATR0665G650 Amborella trichopoda HOM05D000104 ORTHO05D004363 4.0e-24 115.9 89 65.2
Aqoxy7G00075 Aquilegia oxysepala HOM05D000104 ORTHO05D004363 6.8e-24 115.2 89 65.2
Cfa017683 Carpinus fangiana HOM05D000104 ORTHO05D004363 6.8e-24 115.2 89 65.2
Haze_20464 Corylus avellana HOM05D000104 ORTHO05D004363 6.8e-24 115.2 89 65.2
THA.LOC104819143 Tarenaya hassleriana HOM05D000104 ORTHO05D004363 6.8e-24 115.2 89 64.0
Dinv37465 Davidia involucrata HOM05D000104 ORTHO05D004363 2.0e-23 113.6 79 69.6
CANSAT35G1590 Cannabis sativa HOM05D000104 ORTHO05D004363 3.4e-23 112.8 89 62.9
unitig_92.g28134 Utricularia gibba HOM05D000104 ORTHO05D004363 1.8e-21 107.1 71 73.2
AagrBONN_evm.TU.Sc2ySwM_228.1549 Anthoceros agrestis HOM05D000104 ORTHO05D004363 7.0e-21 105.1 89 60.7
PSO832G0838 Papaver somniferum HOM05D000104 ORTHO05D004363 2.0e-20 103.6 91 57.1
SEGI_24237 Sequoiadendron giganteum HOM05D000104 ORTHO05D004363 4.5e-20 102.4 89 56.2
Mapoly0038s0059 Marchantia polymorpha HOM05D000104 ORTHO05D004363 3.8e-19 99.4 89 59.6
arahy.Tifrunner.gnm1.ann1.9A92AA Arachis hypogaea HOM05D000750 ORTHO05D031620 6.6e-19 98.6 71 67.6
Pp3c3_11220 Physcomitrium patens HOM05D000104 ORTHO05D004363 5.6e-18 95.5 89 56.2
ATR0559G182 Amborella trichopoda HOM05D000104 ORTHO05D004363 1.8e-16 90.5 67 64.2
SMO223G0022 Selaginella moellendorffii HOM05D000104 ORTHO05D004363 2.3e-16 90.1 89 51.7
Nitab4.5_0002633g0050 Nicotiana tabacum HOM05D000054 ORTHO05D000286 1.2e-12 77.8 115 41.7
CBR_g57043 Chara braunii HOM05D000104 ORTHO05D004363 7.8e-12 75.1 89 48.3
TAR362G0053 Trochodendron aralioides HOM05D000104 ORTHO05D004363 1.5e-07 60.8 37 78.4
DCAR_019924 Daucus carota HOM05D000054 ORTHO05D000171 6.4e-06 55.5 48 56.2


User provided reference genes

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