Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G249.5 Capsicum annuum HOM05D000725 ORTHO05D002005 1.5e-204 716.1 393 100.0
CAN.G572.31 Capsicum annuum HOM05D000725 ORTHO05D002005 5.3e-85 318.9 437 49.9
PGSC0003DMG400001851 Solanum tuberosum HOM05D000725 ORTHO05D002005 3.0e-80 303.1 412 52.4
Solyc08g077690.3 Solanum lycopersicum HOM05D000725 ORTHO05D002005 2.6e-79 300.1 418 52.6
Sopen08g026200 Solanum pennellii HOM05D000725 ORTHO05D002005 3.7e-78 296.2 415 51.6
Sopen04g024270 Solanum pennellii HOM05D000725 ORTHO05D002005 4.1e-77 292.7 266 63.2
CAN.G1016.5 Capsicum annuum HOM05D000725 ORTHO05D002005 4.0e-72 276.2 239 63.6
CAN.G916.9 Capsicum annuum HOM05D000725 ORTHO05D002005 8.6e-67 258.5 393 48.6
Nitab4.5_0001981g0020 Nicotiana tabacum HOM05D000725 ORTHO05D002005 6.1e-65 252.3 476 42.0
Sopen01g030290 Solanum pennellii HOM05D000725 ORTHO05D002005 8.0e-65 251.9 401 48.4
PGSC0003DMG400014992 Solanum tuberosum HOM05D000725 ORTHO05D002005 1.4e-64 251.1 246 59.8
Sopen01g026600 Solanum pennellii HOM05D000725 ORTHO05D002005 4.0e-64 249.6 238 61.3
CAN.G1445.14 Capsicum annuum HOM05D000725 ORTHO05D002005 1.5e-63 247.7 299 53.8
Nitab4.5_0002559g0010 Nicotiana tabacum HOM05D000725 ORTHO05D002005 3.7e-62 243.0 254 56.7
Sopen01g030260 Solanum pennellii HOM05D000725 ORTHO05D002005 1.8e-56 224.2 227 56.4
Solyc01g068297.1 Solanum lycopersicum HOM05D000725 ORTHO05D002005 3.7e-54 216.5 237 54.4
Sopen01g030250 Solanum pennellii HOM05D000725 ORTHO05D002005 1.1e-50 204.9 233 51.5
Solyc01g068293.1 Solanum lycopersicum HOM05D000725 ORTHO05D002005 4.7e-49 199.5 238 52.1
PGSC0003DMG400006747 Solanum tuberosum HOM05D000725 ORTHO05D002005 4.9e-46 189.5 399 42.1
Sopen08g026150 Solanum pennellii HOM05D000725 ORTHO05D002005 3.3e-42 176.8 170 58.8
Sopen08g017620 Solanum pennellii HOM05D000725 ORTHO05D002005 4.3e-42 176.4 155 60.6
PGSC0003DMG400014445 Solanum tuberosum HOM05D000725 ORTHO05D002005 2.8e-41 173.7 177 55.9
CAN.G649.4 Capsicum annuum HOM05D000725 ORTHO05D002005 2.4e-37 160.6 391 38.4
PGSC0003DMG400001852 Solanum tuberosum HOM05D000725 ORTHO05D002005 2.1e-36 157.5 404 34.7
PGSC0003DMG400001835 Solanum tuberosum HOM05D000725 ORTHO05D002005 2.1e-33 147.5 226 44.2
Solyc01g060460.2 Solanum lycopersicum HOM05D000725 ORTHO05D002005 2.2e-30 137.5 104 68.3
Solyc08g077670.3 Solanum lycopersicum HOM05D000725 ORTHO05D014250 6.2e-25 119.4 204 41.2
Solyc04g054440.3 Solanum lycopersicum HOM05D000725 ORTHO05D002005 1.2e-20 105.1 69 71.0
PGSC0003DMG400006746 Solanum tuberosum HOM05D000725 ORTHO05D002005 2.7e-20 104.0 295 39.7
PGSC0003DMG400017460 Solanum tuberosum HOM05D000725 ORTHO05D014250 3.0e-19 100.5 104 55.8
Solyc08g077610.3 Solanum lycopersicum HOM05D000725 ORTHO05D002005 3.9e-19 100.1 71 67.6
Sopen08g026180 Solanum pennellii HOM05D000725 ORTHO05D014250 3.9e-19 100.1 202 36.6
Solyc02g033050.3 Solanum lycopersicum HOM05D000725 ORTHO05D002005 8.7e-19 99.0 71 67.6
Solyc01g068320.3 Solanum lycopersicum HOM05D000725 ORTHO05D002005 1.1e-18 98.6 71 66.2
Solyc08g061390.3 Solanum lycopersicum HOM05D000725 ORTHO05D002005 3.1e-16 90.5 71 63.4
Hma1.2p1_1672F.1_g296860 Hydrangea macrophylla HOM05D000725 ORTHO05D002005 2.0e-15 87.8 227 33.5
PGSC0003DMG400006745 Solanum tuberosum HOM05D000725 ORTHO05D002005 3.8e-14 83.6 52 71.2
Atru.chr9.1152 Acer truncatum HOM05D000725 ORTHO05D002005 8.4e-14 82.4 156 31.4
PGSC0003DMG400035515 Solanum tuberosum HOM05D000725 ORTHO05D002005 1.4e-13 81.6 58 67.2
Solyc08g077570.3 Solanum lycopersicum HOM05D000725 ORTHO05D002005 9.3e-13 79.0 62 62.9
PGSC0003DMG400041064 Solanum tuberosum HOM05D000725 ORTHO05D014250 9.3e-13 79.0 52 69.2
Hma1.2p1_0173F.1_g076420 Hydrangea macrophylla HOM05D000725 ORTHO05D002005 1.2e-12 78.6 163 33.7
Actinidia31487 Actinidia chinensis HOM05D000725 ORTHO05D002005 1.6e-12 78.2 140 35.7
Sopen09g009640 Solanum pennellii HOM05D000004 ORTHO05D000034 1.6e-12 78.2 82 56.1
Dinv28892 Davidia involucrata HOM05D000725 ORTHO05D002005 2.1e-12 77.8 270 29.3
Duzib177G0991 Durio zibethinus HOM05D000725 ORTHO05D002005 2.1e-12 77.8 141 35.5
Oeu064142.1 Olea europaea HOM05D000725 ORTHO05D002005 2.1e-12 77.8 282 29.4
Cc08_g06190 Coffea canephora HOM05D000725 ORTHO05D002005 3.5e-12 77.0 268 28.0
FAN03G0676 Fragaria x ananassa HOM05D000725 ORTHO05D002005 4.6e-12 76.6 147 36.7
Sopen08g017600 Solanum pennellii HOM05D000725 ORTHO05D014250 7.9e-12 75.9 169 36.1
FAN01G2656 Fragaria x ananassa HOM05D000725 ORTHO05D002005 1.3e-11 75.1 146 35.6
FAN01G3160 Fragaria x ananassa HOM05D000725 ORTHO05D002005 1.3e-11 75.1 146 35.6
RcHm_v2.0_Chr2g0150021 Rosa chinensis HOM05D000725 ORTHO05D002005 1.3e-11 75.1 145 33.8
CiPaw.12G056600 Carya illinoinensis HOM05D000725 ORTHO05D002005 1.8e-11 74.7 149 32.2
FAN10G1759 Fragaria x ananassa HOM05D000725 ORTHO05D002005 3.9e-11 73.6 124 37.9
Gohir.D05G255700 Gossypium hirsutum HOM05D000725 ORTHO05D002005 5.1e-11 73.2 169 33.1
Gorai.009G267400 Gossypium raimondii HOM05D000725 ORTHO05D002005 1.1e-10 72.0 144 35.4
SGA_v2.0_scaffold190G40409 Striga asiatica HOM05D000725 ORTHO05D002005 1.1e-10 72.0 151 31.8
Cc08_g01490 Coffea canephora HOM05D000725 ORTHO05D002005 1.5e-10 71.6 108 38.0
Gohir.A05G254100 Gossypium hirsutum HOM05D000725 ORTHO05D002005 1.5e-10 71.6 144 35.4
Oeu064143.1 Olea europaea HOM05D000725 ORTHO05D002005 1.5e-10 71.6 113 39.8
MSTRG.20502 Avicennia marina HOM05D000725 ORTHO05D002005 2.5e-10 70.9 117 34.2
Migut.B01247 Erythranthe guttata HOM05D000725 ORTHO05D002005 3.3e-10 70.5 165 30.3
Aqoxy3G00805 Aquilegia oxysepala HOM05D000725 ORTHO05D002005 4.3e-10 70.1 133 35.3
Cc00_g05920 Coffea canephora HOM05D000725 ORTHO05D002005 4.3e-10 70.1 200 30.5
Manes.15G171000 Manihot esculenta HOM05D000725 ORTHO05D002005 9.6e-10 68.9 242 29.3
FvH4_7g20540 Fragaria vesca HOM05D000725 ORTHO05D002005 1.3e-09 68.6 151 34.4
FAN06G2800 Fragaria x ananassa HOM05D000725 ORTHO05D002005 1.3e-09 68.6 151 34.4
FAN06G4690 Fragaria x ananassa HOM05D000725 ORTHO05D002005 1.3e-09 68.6 151 34.4
Lalb_Chr16g0379301 Lupinus albus HOM05D000725 ORTHO05D002005 1.6e-09 68.2 218 27.5
Dinv44034 Davidia involucrata HOM05D002442 ORTHO05D002670 2.1e-09 67.8 141 34.0
FvH4_5g20730 Fragaria vesca HOM05D000725 ORTHO05D002005 3.7e-09 67.0 154 31.2
FAN18G0116 Fragaria x ananassa HOM05D000725 ORTHO05D002005 3.7e-09 67.0 154 31.2
Potri.014G050200 Populus trichocarpa HOM05D000725 ORTHO05D002005 3.7e-09 67.0 118 36.4
CAN.G572.34 Capsicum annuum HOM05D000725 ORTHO05D002005 4.8e-09 66.6 165 40.0
DCAR_008315 Daucus carota HOM05D000725 ORTHO05D002005 4.8e-09 66.6 112 38.4
QL04p026517 Quercus lobata HOM05D000725 ORTHO05D002005 4.8e-09 66.6 156 33.3
Lj9A551T46 Lonicera japonica HOM05D000725 ORTHO05D002005 1.1e-08 65.5 290 27.9
Actinidia25924 Actinidia chinensis HOM05D000725 ORTHO05D002005 1.4e-08 65.1 219 29.2
Sabra14G0037700 Salix brachista HOM05D000725 ORTHO05D002005 1.8e-08 64.7 119 36.1
SalBow5G0521 Salvia bowleyana HOM05D000725 ORTHO05D002005 1.8e-08 64.7 117 39.3
SalBow5G2797 Salvia bowleyana HOM05D000725 ORTHO05D002005 1.8e-08 64.7 135 29.6
Migut.B01246 Erythranthe guttata HOM05D000725 ORTHO05D002005 2.4e-08 64.3 237 26.2
RcHm_v2.0_Chr7g0206521 Rosa chinensis HOM05D000725 ORTHO05D002005 3.1e-08 63.9 289 28.0
Eucgr.E00332 Eucalyptus grandis HOM05D000725 ORTHO05D002005 4.0e-08 63.5 144 31.2
Prupe.5G052400 Prunus persica HOM05D000725 ORTHO05D002005 4.0e-08 63.5 150 28.7
Peaxi162Scf00715g00118 Petunia axillaris HOM05D000725 ORTHO05D014250 5.3e-08 63.2 168 36.9
Sabra14G0035600 Salix brachista HOM05D000725 ORTHO05D002005 5.3e-08 63.2 119 36.1
Lalb_Chr09g0324051 Lupinus albus HOM05D000725 ORTHO05D002005 6.9e-08 62.8 139 29.5
Sopen01g030240 Solanum pennellii HOM05D000002 ORTHO05D000001 9.0e-08 62.4 76 47.4
SGA_v2.0_scaffold135G34961 Striga asiatica HOM05D000725 ORTHO05D002005 9.0e-08 62.4 170 29.4
AUR62018808 Chenopodium quinoa HOM05D000725 ORTHO05D002005 1.5e-07 61.6 115 33.9
FAN13G1989 Fragaria x ananassa HOM05D000725 ORTHO05D002005 2.0e-07 61.2 277 29.6
FAN08G1755 Fragaria x ananassa HOM05D000725 ORTHO05D002005 2.6e-07 60.8 202 31.2
Oeu059735.1 Olea europaea HOM05D000725 ORTHO05D002005 2.6e-07 60.8 169 29.0
Haze_08343 Corylus avellana HOM05D000725 ORTHO05D002005 3.4e-07 60.5 118 29.7
TAR629G1397 Trochodendron aralioides HOM05D000725 ORTHO05D002005 3.4e-07 60.5 245 28.2
FAN08G1631 Fragaria x ananassa HOM05D000725 ORTHO05D002005 4.5e-07 60.1 277 29.6
Nn1g00714 Nelumbo nucifera HOM05D000725 ORTHO05D002005 4.5e-07 60.1 108 33.3
ClCG09G012590 Citrullus lanatus HOM05D000725 ORTHO05D002005 5.8e-07 59.7 134 32.1
Thecc.08G178700 Theobroma cacao HOM05D000725 ORTHO05D002005 5.8e-07 59.7 278 24.1
FvH4_5g20740 Fragaria vesca HOM05D000725 ORTHO05D002005 7.6e-07 59.3 239 28.5
Cfa012353 Carpinus fangiana HOM05D000725 ORTHO05D002005 1.0e-06 58.9 120 29.2
FAN18G1620 Fragaria x ananassa HOM05D000725 ORTHO05D002005 1.0e-06 58.9 218 29.4
QL05p067774 Quercus lobata HOM05D000725 ORTHO05D002005 1.0e-06 58.9 206 33.0
Sed0017522 Sechium edule HOM05D000725 ORTHO05D002005 1.0e-06 58.9 105 35.2
EL10Ac5g12225 Beta vulgaris HOM05D000725 ORTHO05D002005 1.3e-06 58.5 114 31.6
PGR042G0187 Punica granatum HOM05D000725 ORTHO05D002005 1.3e-06 58.5 138 29.0
Rhsim07G0119700 Rhododendron simsii HOM05D000725 ORTHO05D002005 1.7e-06 58.2 70 40.0
MELO3C003343.2 Cucumis melo HOM05D000725 ORTHO05D002005 2.2e-06 57.8 132 32.6
DCAR_002749 Daucus carota HOM05D000725 ORTHO05D002005 2.9e-06 57.4 290 25.5
TAR636G0971 Trochodendron aralioides HOM05D000725 ORTHO05D002005 2.9e-06 57.4 179 30.7
FAN04G2213 Fragaria x ananassa HOM05D000725 ORTHO05D002005 4.9e-06 56.6 274 29.2
Aqoxy4G01578 Aquilegia oxysepala HOM05D000725 ORTHO05D002005 6.5e-06 56.2 121 35.5
Migut.B01495 Erythranthe guttata HOM05D000725 ORTHO05D002005 6.5e-06 56.2 171 27.5
Migut.H00017 Erythranthe guttata HOM05D000725 ORTHO05D002005 6.5e-06 56.2 171 31.0
CARHR100440 Cardamine hirsuta HOM05D000725 ORTHO05D002005 8.4e-06 55.8 92 39.1
QL12p008403 Quercus lobata HOM05D000725 ORTHO05D002005 8.4e-06 55.8 302 24.5
SGA_v2.0_scaffold34G13583 Striga asiatica HOM05D000725 ORTHO05D002005 8.4e-06 55.8 110 34.5


User provided reference genes

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