Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G195.1 Capsicum annuum HOM05D000880 ORTHO05D043408 1.7e-35 152.1 75 100.0
CAN.G195.2 Capsicum annuum HOM05D000880 ORTHO05D008158 3.1e-34 147.9 74 97.3
PGSC0003DMG400029591 Solanum tuberosum HOM05D000880 ORTHO05D008158 2.2e-24 115.2 74 71.6
Solyc08g074270.4 Solanum lycopersicum HOM05D000880 ORTHO05D008158 3.8e-24 114.4 74 71.6
Sopen08g022920 Solanum pennellii HOM05D000880 ORTHO05D008158 1.9e-23 112.1 74 70.3
Nitab4.5_0000919g0070 Nicotiana tabacum HOM05D000880 ORTHO05D008158 1.0e-21 106.3 73 69.9
Peaxi162Scf00213g01024 Petunia axillaris HOM05D000880 ORTHO05D008158 9.7e-20 99.8 73 61.6
Nitab4.5_0000970g0030 Nicotiana tabacum HOM05D000880 ORTHO05D008158 2.2e-19 98.6 74 64.9
unitig_748.g8176 Utricularia gibba HOM05D002718 ORTHO05D003269 4.5e-17 90.9 67 58.2
Dinv26557 Davidia involucrata HOM05D000880 ORTHO05D008158 5.9e-17 90.5 76 56.6
MSTRG.25767 Avicennia marina HOM05D000880 ORTHO05D008158 2.2e-16 88.6 73 50.7
Duzib168G1559 Durio zibethinus HOM05D000880 ORTHO05D008158 6.5e-16 87.0 70 55.7
Oeu014113.1 Olea europaea HOM05D000880 ORTHO05D008158 1.1e-15 86.3 64 57.8
ClCG05G017430 Citrullus lanatus HOM05D000880 ORTHO05D008158 1.9e-15 85.5 61 65.6
COL.COLO4_18613 Corchorus olitorius HOM05D000880 ORTHO05D008158 7.2e-15 83.6 73 52.1
SalBow4G1400 Salvia bowleyana HOM05D000880 ORTHO05D008158 7.2e-15 83.6 74 50.0
Thecc.09G004900 Theobroma cacao HOM05D000880 ORTHO05D008158 7.2e-15 83.6 70 54.3
MD15G1110200 Malus domestica HOM05D000880 ORTHO05D008158 1.6e-14 82.4 73 49.3
CsaV3_3G046930 Cucumis sativus L. HOM05D000880 ORTHO05D008158 2.1e-14 82.0 70 57.1
TAR626G0578 Trochodendron aralioides HOM05D000880 ORTHO05D008158 2.1e-14 82.0 67 56.7
Sed0006739 Sechium edule HOM05D000880 ORTHO05D008158 2.7e-14 81.6 75 54.7
SGA_v2.0_scaffold27G11654 Striga asiatica HOM05D000880 ORTHO05D008158 4.7e-14 80.9 70 58.6
FvH4_2g30661 Fragaria vesca HOM05D000880 ORTHO05D008158 6.1e-14 80.5 73 49.3
FAN24G1353 Fragaria x ananassa HOM05D000880 ORTHO05D008158 6.1e-14 80.5 73 49.3
Gohir.D06G109200 Gossypium hirsutum HOM05D000880 ORTHO05D008158 6.1e-14 80.5 70 52.9
Gorai.010G124000 Gossypium raimondii HOM05D000880 ORTHO05D008158 6.1e-14 80.5 70 52.9
Prupe.1G462400 Prunus persica HOM05D000880 ORTHO05D008158 8.0e-14 80.1 73 47.9
Ah.10g033780 Amaranthus hybridus HOM05D000880 ORTHO05D008158 1.4e-13 79.3 63 52.4
DCAR_030962 Daucus carota HOM05D005064 ORTHO05D008158 1.4e-13 79.3 63 63.5
RcHm_v2.0_Chr6g0312231 Rosa chinensis HOM05D000880 ORTHO05D008158 1.8e-13 79.0 73 50.7
GSVIVG01035548001 Vitis vinifera HOM05D000880 ORTHO05D008158 1.8e-13 79.0 69 50.7
Gohir.A06G107000 Gossypium hirsutum HOM05D000880 ORTHO05D008158 3.0e-13 78.2 70 51.4
Cfa013251 Carpinus fangiana HOM05D000880 ORTHO05D008158 5.2e-13 77.4 70 48.6
A06p35620 Brassica napus HOM05D000880 ORTHO05D008158 8.8e-13 76.6 63 52.4
BraA06t26486Z Brassica rapa HOM05D000880 ORTHO05D008158 8.8e-13 76.6 63 52.4
Cpa.g.sc244.8 Carica papaya HOM05D000880 ORTHO05D008158 8.8e-13 76.6 70 50.0
Manes.16G136800 Manihot esculenta HOM05D000880 ORTHO05D008158 8.8e-13 76.6 60 55.0
Thhalv10003995m.g Eutrema salsugineum HOM05D000880 ORTHO05D008158 1.2e-12 76.3 63 50.8
FAN20G0534 Fragaria x ananassa HOM05D000880 ORTHO05D008158 1.2e-12 76.3 61 55.7
Nn8g40848 Nelumbo nucifera HOM05D000880 ORTHO05D008158 1.2e-12 76.3 67 52.2
Aqoxy7G02771 Aquilegia oxysepala HOM05D000880 ORTHO05D008158 1.5e-12 75.9 60 53.3
Migut.A00456 Erythranthe guttata HOM05D000880 ORTHO05D008158 1.5e-12 75.9 74 51.4
BcaB04g19802 Brassica carinata HOM05D000880 ORTHO05D008158 2.0e-12 75.5 67 52.2
C09p07080 Brassica napus HOM05D000880 ORTHO05D008158 2.0e-12 75.5 66 53.0
AUR62020632 Chenopodium quinoa HOM05D000880 ORTHO05D008158 2.6e-12 75.1 63 50.8
AUR62038750 Chenopodium quinoa HOM05D000880 ORTHO05D008158 2.6e-12 75.1 63 50.8
Medtr3g108700 Medicago truncatula HOM05D000880 ORTHO05D008158 2.6e-12 75.1 69 46.4
TWI34G0460 Tripterygium wilfordii HOM05D000880 ORTHO05D008158 3.4e-12 74.7 74 41.9
A09p06390 Brassica napus HOM05D000880 ORTHO05D008158 4.4e-12 74.3 68 50.0
Sc09g0007880 Simmondsia chinensis HOM05D000880 ORTHO05D008158 4.4e-12 74.3 64 53.1
Ciclev10010001m.g Citrus clementina HOM05D000880 ORTHO05D043408 5.7e-12 73.9 64 54.7
Sp2g22600 Schrenkiella parvula HOM05D000880 ORTHO05D008158 5.7e-12 73.9 68 50.0
EL10Ac2g03714 Beta vulgaris HOM05D000880 ORTHO05D008158 7.5e-12 73.6 64 51.6
C07p42930 Brassica napus HOM05D005859 ORTHO05D008158 9.7e-12 73.2 66 51.5
BolC7t44822H Brassica oleracea HOM05D005859 ORTHO05D008158 9.7e-12 73.2 66 51.5
BraA09t36284Z Brassica rapa HOM05D000880 ORTHO05D008158 9.7e-12 73.2 65 50.8
Carub.0006s2270 Capsella rubella HOM05D000880 ORTHO05D008158 9.7e-12 73.2 66 50.0
Potri.006G277500 Populus trichocarpa HOM05D000880 ORTHO05D008158 9.7e-12 73.2 60 55.0
Phvul.009G100200 Phaseolus vulgaris HOM05D000880 ORTHO05D008158 1.3e-11 72.8 72 48.6
CDE02G2617 Ceratophyllum demersum HOM05D000880 ORTHO05D008158 1.7e-11 72.4 74 48.6
Psat5g025080 Pisum sativum HOM05D000880 ORTHO05D008158 1.7e-11 72.4 77 46.8
TPR.G12367 Trifolium pratense HOM05D000880 ORTHO05D008158 1.7e-11 72.4 69 46.4
PGR044G0601 Punica granatum HOM05D000880 ORTHO05D008158 2.8e-11 71.6 62 51.6
AT5G24850 Arabidopsis thaliana HOM05D000880 ORTHO05D008158 3.7e-11 71.2 65 49.2
arahy.Tifrunner.gnm1.ann1.95FWWQ Arachis hypogaea HOM05D000880 ORTHO05D008158 3.7e-11 71.2 66 45.5
CSS0016378 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D008158 4.8e-11 70.9 72 50.0
CSS0036637 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D008158 4.8e-11 70.9 72 50.0
Glyma.04G074500 Glycine max HOM05D000880 ORTHO05D008158 4.8e-11 70.9 75 44.0
Rhsim07G0170300 Rhododendron simsii HOM05D000880 ORTHO05D008158 6.3e-11 70.5 57 52.6
Sabra06G0215200 Salix brachista HOM05D000880 ORTHO05D008158 6.3e-11 70.5 60 53.3
THA.LOC104803319 Tarenaya hassleriana HOM05D000880 ORTHO05D008158 6.3e-11 70.5 63 50.8
Zm00001eb389640 Zea mays HOM05D000880 ORTHO05D008158 6.3e-11 70.5 61 50.8
Cc00_g04780 Coffea canephora HOM05D000880 ORTHO05D008158 8.3e-11 70.1 66 50.0
Atru.chr7.2669 Acer truncatum HOM05D000880 ORTHO05D008158 1.1e-10 69.7 63 47.6
ATR0626G237 Amborella trichopoda HOM05D000880 ORTHO05D008158 1.1e-10 69.7 61 52.5
Lj8C437G0 Lonicera japonica HOM05D000880 ORTHO05D008158 1.1e-10 69.7 65 46.2
Os06g0661800 Oryza sativa ssp. japonica HOM05D000880 ORTHO05D008158 1.1e-10 69.7 60 50.0
CARHR188600 Cardamine hirsuta HOM05D000880 ORTHO05D008158 1.4e-10 69.3 65 47.7
VMungo1309G2560 Vigna mungo HOM05D000880 ORTHO05D008158 1.4e-10 69.3 60 51.7
arahy.Tifrunner.gnm1.ann1.C9KM7P Arachis hypogaea HOM05D000880 ORTHO05D008158 1.8e-10 68.9 67 44.8
AL6G36510 Arabidopsis lyrata HOM05D000880 ORTHO05D008158 2.4e-10 68.6 70 47.1
PSO421G0529 Papaver somniferum HOM05D000880 ORTHO05D008158 2.4e-10 68.6 76 48.7
QL12p024664 Quercus lobata HOM05D000880 ORTHO05D008158 2.4e-10 68.6 65 46.2
HPP92_021891 Vanilla planifolia HOM05D000880 ORTHO05D008158 3.1e-10 68.2 67 47.8
Eucgr.C03997 Eucalyptus grandis HOM05D000880 ORTHO05D008158 4.1e-10 67.8 53 56.6
Hund06650 Selenicereus undatus HOM05D000880 ORTHO05D008158 4.1e-10 67.8 65 47.7
Ca_15679_v3 Cicer arietinum L. HOM05D000880 ORTHO05D008158 5.3e-10 67.4 69 44.9
PSO423G0300 Papaver somniferum HOM05D000880 ORTHO05D008158 2.0e-09 65.5 62 51.6
Aa31LG11G4060 Aethionema arabicum HOM05D000880 ORTHO05D008158 3.5e-09 64.7 63 44.4
Lj1g0027131 Lotus japonicus HOM05D000880 ORTHO05D008158 1.3e-08 62.8 64 45.3
Lalb_Chr23g0268891 Lupinus albus HOM05D000880 ORTHO05D008158 1.3e-08 62.8 64 48.4
CiPaw.07G214700 Carya illinoinensis HOM05D000880 ORTHO05D008158 2.2e-08 62.0 52 50.0
SMO172G0045 Selaginella moellendorffii HOM05D000880 ORTHO05D008158 2.9e-08 61.6 52 55.8
SEGI_11643 Sequoiadendron giganteum HOM05D000880 ORTHO05D008158 3.8e-08 61.2 57 50.9
Actinidia03580 Actinidia chinensis HOM05D000880 ORTHO05D008158 3.2e-07 58.2 69 43.5


User provided reference genes

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