Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1728.2 Capsicum annuum HOM05D004857 ORTHO05D005663 1.3e-76 289.7 144 100.0
CAN.G457.2 Capsicum annuum HOM05D004857 ORTHO05D005663 3.5e-26 122.1 84 76.2
CAN.G457.3 Capsicum annuum HOM05D004857 ORTHO05D005663 3.5e-26 122.1 84 76.2
Nitab4.5_0001114g0050 Nicotiana tabacum HOM05D004857 ORTHO05D005663 4.3e-24 115.2 84 71.4
Nitab4.5_0002665g0010 Nicotiana tabacum HOM05D004857 ORTHO05D005663 1.2e-23 113.6 84 70.2
PGSC0003DMG401015931 Solanum tuberosum HOM05D004857 ORTHO05D005663 2.8e-23 112.5 84 70.2
SalBow6G1194 Salvia bowleyana HOM05D004857 ORTHO05D005663 3.6e-23 112.1 84 70.2
Solyc07g017490.3 Solanum lycopersicum HOM05D004857 ORTHO05D005663 3.6e-23 112.1 84 69.0
Sopen07g006280 Solanum pennellii HOM05D004857 ORTHO05D005663 3.6e-23 112.1 84 69.0
CiPaw.03G200100 Carya illinoinensis HOM05D004857 ORTHO05D005663 1.5e-21 106.7 69 79.7
Dinv44702 Davidia involucrata HOM05D004857 ORTHO05D005663 1.5e-21 106.7 69 76.8
TWI34G1843 Tripterygium wilfordii HOM05D004857 ORTHO05D005663 1.5e-21 106.7 69 78.3
Eucgr.C00765 Eucalyptus grandis HOM05D004857 ORTHO05D005663 3.4e-21 105.5 69 76.8
Actinidia39614 Actinidia chinensis HOM05D004857 ORTHO05D005663 4.4e-21 105.1 84 69.0
Actinidia30259 Actinidia chinensis HOM05D004857 ORTHO05D005663 7.6e-21 104.4 84 67.9
Cpa.g.sc3709.1 Carica papaya HOM05D004857 ORTHO05D005663 9.9e-21 104.0 69 78.3
Lj4A920T60 Lonicera japonica HOM05D004857 ORTHO05D005663 9.9e-21 104.0 69 75.4
Thecc.09G070000 Theobroma cacao HOM05D004857 ORTHO05D005663 1.3e-20 103.6 84 66.7
unitig_699.g19261 Utricularia gibba HOM05D004857 ORTHO05D005663 1.7e-20 103.2 95 62.1
QL11p002992 Quercus lobata HOM05D004857 ORTHO05D005663 2.2e-20 102.8 69 76.8
CSS0030162 Camellia sinensis var. sinensis HOM05D004857 ORTHO05D005663 2.9e-20 102.4 69 73.9
Duzib168G0723 Durio zibethinus HOM05D004857 ORTHO05D005663 2.9e-20 102.4 69 75.4
Gohir.A05G036200 Gossypium hirsutum HOM05D004857 ORTHO05D005663 2.9e-20 102.4 69 75.4
Gohir.D05G037700 Gossypium hirsutum HOM05D004857 ORTHO05D005663 2.9e-20 102.4 69 75.4
Gorai.009G038200 Gossypium raimondii HOM05D004857 ORTHO05D005663 2.9e-20 102.4 69 75.4
Lsat_1_v5_gn_5_138760 Lactuca sativa HOM05D004857 ORTHO05D005663 2.9e-20 102.4 69 72.5
Cfa002936 Carpinus fangiana HOM05D004857 ORTHO05D005663 3.8e-20 102.1 69 75.4
Ciclev10007866m.g Citrus clementina HOM05D004857 ORTHO05D005663 3.8e-20 102.1 69 75.4
MD15G1223900 Malus domestica HOM05D004857 ORTHO05D005663 3.8e-20 102.1 83 62.7
Nn7g37725 Nelumbo nucifera HOM05D004857 ORTHO05D005663 3.8e-20 102.1 69 73.9
TWI32G0792 Tripterygium wilfordii HOM05D004857 ORTHO05D005663 4.9e-20 101.7 69 75.4
Duzib187G1561 Durio zibethinus HOM05D004857 ORTHO05D005663 6.4e-20 101.3 69 73.9
RcHm_v2.0_Chr2g0095991 Rosa chinensis HOM05D004857 ORTHO05D005663 6.4e-20 101.3 69 72.5
MD02G1102700 Malus domestica HOM05D004857 ORTHO05D005663 8.4e-20 100.9 83 61.4
Aqoxy6G02713 Aquilegia oxysepala HOM05D004857 ORTHO05D005663 1.1e-19 100.5 69 72.5
SHI27983 Sapria himalayana HOM05D004857 ORTHO05D005663 1.1e-19 100.5 69 73.9
Manes.16G090200 Manihot esculenta HOM05D004857 ORTHO05D005663 1.4e-19 100.1 69 73.9
Psat1g138640 Pisum sativum HOM05D004857 ORTHO05D005663 1.4e-19 100.1 69 76.8
vmacro03340 Vaccinium macrocarpon HOM05D004857 ORTHO05D005663 1.9e-19 99.8 69 72.5
vmacro17076 Vaccinium macrocarpon HOM05D004857 ORTHO05D005663 1.9e-19 99.8 69 72.5
COL.COLO4_21204 Corchorus olitorius HOM05D004857 ORTHO05D005663 2.4e-19 99.4 69 73.9
Lalb_Chr08g0232851 Lupinus albus HOM05D004857 ORTHO05D005663 2.4e-19 99.4 69 75.4
Oeu000275.2 Olea europaea HOM05D004857 ORTHO05D005663 2.4e-19 99.4 64 76.6
PGR142G2122 Punica granatum HOM05D004857 ORTHO05D005663 2.4e-19 99.4 69 73.9
EL10Ac4g09573 Beta vulgaris HOM05D004857 ORTHO05D005663 3.2e-19 99.0 87 62.1
HanXRQChr12g0355141 Helianthus annuus HOM05D004857 ORTHO05D005663 3.2e-19 99.0 70 72.9
Oeu041809.2 Olea europaea HOM05D004857 ORTHO05D005663 3.2e-19 99.0 69 75.4
Phvul.009G223400 Phaseolus vulgaris HOM05D004857 ORTHO05D005663 3.2e-19 99.0 69 75.4
GSVIVG01015011001 Vitis vinifera HOM05D004857 ORTHO05D005663 3.2e-19 99.0 69 72.5
arahy.Tifrunner.gnm1.ann1.I7JLU4 Arachis hypogaea HOM05D004857 ORTHO05D005663 4.2e-19 98.6 69 75.4
arahy.Tifrunner.gnm1.ann1.N970BB Arachis hypogaea HOM05D004857 ORTHO05D005663 4.2e-19 98.6 69 75.4
arahy.Tifrunner.gnm1.ann1.N9ATPP Arachis hypogaea HOM05D004857 ORTHO05D005663 4.2e-19 98.6 69 75.4
Ca_02281_v3 Cicer arietinum L. HOM05D004857 ORTHO05D005663 4.2e-19 98.6 69 75.4
Glyma.09G074100 Glycine max HOM05D004857 ORTHO05D005663 4.2e-19 98.6 69 75.4
Glyma.15G183100 Glycine max HOM05D004857 ORTHO05D005663 4.2e-19 98.6 69 75.4
Medtr2g044200 Medicago truncatula HOM05D004857 ORTHO05D005663 4.2e-19 98.6 69 75.4
Sed0019967 Sechium edule HOM05D004857 ORTHO05D005663 4.2e-19 98.6 69 75.4
THA.LOC104819454 Tarenaya hassleriana HOM05D004857 ORTHO05D005663 4.2e-19 98.6 69 72.5
TAR383G0334 Trochodendron aralioides HOM05D004857 ORTHO05D005663 4.2e-19 98.6 69 72.5
Rhsim05G0001900 Rhododendron simsii HOM05D004857 ORTHO05D005663 5.4e-19 98.2 69 72.5
ATR0681G246 Amborella trichopoda HOM05D004857 ORTHO05D005663 7.1e-19 97.8 69 71.0
MELO3C009580.2 Cucumis melo HOM05D004857 ORTHO05D005663 7.1e-19 97.8 69 75.4
CsaV3_3G038370 Cucumis sativus L. HOM05D004857 ORTHO05D005663 7.1e-19 97.8 69 75.4
VMungo1309G0172 Vigna mungo HOM05D004857 ORTHO05D005663 7.1e-19 97.8 69 73.9
Cc06_g12730 Coffea canephora HOM05D004857 ORTHO05D005663 9.3e-19 97.4 70 74.3
MBI19_g37995_MAGBIO Magnolia biondii HOM05D004857 ORTHO05D005663 9.3e-19 97.4 69 72.5
MSTRG.19426 Avicennia marina HOM05D004857 ORTHO05D005663 1.2e-18 97.1 74 68.9
CANSAT56G1105 Cannabis sativa HOM05D004857 ORTHO05D005663 1.2e-18 97.1 83 63.9
Migut.J00878 Erythranthe guttata HOM05D004857 ORTHO05D005663 1.2e-18 97.1 58 81.0
Lj6g0010651 Lotus japonicus HOM05D004857 ORTHO05D005663 1.2e-18 97.1 69 75.4
CDE05G0310 Ceratophyllum demersum HOM05D004857 ORTHO05D005663 2.1e-18 96.3 69 68.1
FAN28G2840 Fragaria x ananassa HOM05D004857 ORTHO05D005663 2.7e-18 95.9 69 66.7
CDE05G0890 Ceratophyllum demersum HOM05D004857 ORTHO05D005663 3.5e-18 95.5 64 73.4
PSO421G0319 Papaver somniferum HOM05D004857 ORTHO05D005663 3.5e-18 95.5 68 70.6
Potri.018G064100 Populus trichocarpa HOM05D004857 ORTHO05D005663 4.6e-18 95.1 70 71.4
Sabra18G0057000 Salix brachista HOM05D004857 ORTHO05D005663 4.6e-18 95.1 70 72.9
AL4G19270 Arabidopsis lyrata HOM05D004857 ORTHO05D005663 1.7e-17 93.2 69 69.6
CARHR114530 Cardamine hirsuta HOM05D004857 ORTHO05D005663 1.7e-17 93.2 69 68.1
Sc08g0005030 Simmondsia chinensis HOM05D004857 ORTHO05D005663 1.7e-17 93.2 69 71.0
AT2G26460 Arabidopsis thaliana HOM05D004857 ORTHO05D005663 2.3e-17 92.8 69 68.1
AUR62000486 Chenopodium quinoa HOM05D004857 ORTHO05D005663 2.3e-17 92.8 68 69.1
AUR62006828 Chenopodium quinoa HOM05D004857 ORTHO05D005663 2.3e-17 92.8 69 68.1
HPP92_017869 Vanilla planifolia HOM05D004857 ORTHO05D005663 2.3e-17 92.8 69 66.7
Carub.0004s0646 Capsella rubella HOM05D004857 ORTHO05D005663 3.0e-17 92.4 69 68.1
FvH4_1g09440 Fragaria vesca HOM05D004857 ORTHO05D005663 3.9e-17 92.0 69 65.2
FAN19G2563 Fragaria x ananassa HOM05D004857 ORTHO05D005663 3.9e-17 92.0 69 65.2
FAN26G0201 Fragaria x ananassa HOM05D004857 ORTHO05D005663 3.9e-17 92.0 69 65.2
FAN26G1404 Fragaria x ananassa HOM05D004857 ORTHO05D005663 3.9e-17 92.0 69 65.2
FAN23G0125 Fragaria x ananassa HOM05D004857 ORTHO05D005663 5.1e-17 91.7 69 63.8
PSO104G0255 Papaver somniferum HOM05D004857 ORTHO05D005663 5.1e-17 91.7 68 66.2
Sp4g07340 Schrenkiella parvula HOM05D004857 ORTHO05D005663 5.1e-17 91.7 77 61.0
Actinidia02202 Actinidia chinensis HOM05D004857 ORTHO05D005663 8.7e-17 90.9 64 73.4
Aa31LG5G9410 Aethionema arabicum HOM05D004857 ORTHO05D005663 8.7e-17 90.9 69 65.2
Thhalv10001246m.g Eutrema salsugineum HOM05D004857 ORTHO05D005663 8.7e-17 90.9 77 62.3
SEGI_40202 Sequoiadendron giganteum HOM05D004857 ORTHO05D005663 1.9e-16 89.7 66 65.2
BcaC07g40818 Brassica carinata HOM05D004857 ORTHO05D005663 2.5e-16 89.4 69 66.7
C08p38110 Brassica napus HOM05D004857 ORTHO05D005663 2.5e-16 89.4 69 66.7
BolC8t51386H Brassica oleracea HOM05D004857 ORTHO05D005663 2.5e-16 89.4 69 66.7
BcaB08g35315 Brassica carinata HOM05D004857 ORTHO05D005663 3.3e-16 89.0 77 61.0
TPR.G27074 Trifolium pratense HOM05D004857 ORTHO05D005663 3.3e-16 89.0 61 75.4
Hund21824 Selenicereus undatus HOM05D004857 ORTHO05D005663 4.3e-16 88.6 69 66.7
A09p55180 Brassica napus HOM05D004857 ORTHO05D005663 5.6e-16 88.2 69 65.2
BraA09t40926Z Brassica rapa HOM05D004857 ORTHO05D005663 5.6e-16 88.2 69 65.2
ClCG10G017920 Citrullus lanatus HOM05D004857 ORTHO05D005663 7.3e-16 87.8 84 61.9
BcaB08g35308 Brassica carinata HOM05D004857 ORTHO05D005663 1.3e-15 87.0 72 63.9
Zm00001eb405000 Zea mays HOM05D004857 ORTHO05D005663 1.3e-15 87.0 69 66.7
Os11g0146700 Oryza sativa ssp. japonica HOM05D004857 ORTHO05D005663 3.6e-15 85.5 63 69.8
CBR_g41264 Chara braunii HOM05D004857 ORTHO05D005663 9.0e-14 80.9 70 61.4
SMO266G0005 Selaginella moellendorffii HOM05D004857 ORTHO05D005663 9.0e-14 80.9 80 60.0
Os12g0143400 Oryza sativa ssp. japonica HOM05D004857 ORTHO05D005663 4.5e-13 78.6 64 65.6
ECA234G1433 Erigeron canadensis HOM05D000959 ORTHO05D000775 9.9e-13 77.4 86 51.2
Actinidia27556 Actinidia chinensis HOM05D004857 ORTHO05D005663 2.9e-12 75.9 53 75.5
Mapoly0117s0005 Marchantia polymorpha HOM05D004857 ORTHO05D005663 1.1e-11 73.9 65 56.9
Pp3c19_4680 Physcomitrium patens HOM05D004857 ORTHO05D005663 2.4e-11 72.8 70 54.3
vmacro05712 Vaccinium macrocarpon HOM05D006033 ORTHO05D005663 2.4e-11 72.8 49 75.5
CAN.G112.16 Capsicum annuum HOM05D004324 ORTHO05D004840 7.1e-11 71.2 36 88.9
AagrBONN_evm.TU.Sc2ySwM_344.4798 Anthoceros agrestis HOM05D004857 ORTHO05D005663 1.2e-10 70.5 62 58.1
vmacro12720 Vaccinium macrocarpon HOM05D004857 ORTHO05D005663 3.5e-10 68.9 63 61.9
TAR626G1635 Trochodendron aralioides HOM05D001862 ORTHO05D005663 1.3e-09 67.0 99 43.4
DCAR_024780 Daucus carota HOM05D004857 ORTHO05D005663 1.1e-08 63.9 42 71.4
Peaxi162Scf01184g10017 Petunia axillaris HOM05D004857 ORTHO05D005663 1.1e-08 63.9 55 65.5
SMO270G0035 Selaginella moellendorffii HOM05D004857 ORTHO05D005663 1.9e-08 63.2 65 52.3


User provided reference genes

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