Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1263.6 Capsicum annuum HOM05D006551 ORTHO05D008546 1.2e-120 436.4 205 100.0
PGSC0003DMG400015008 Solanum tuberosum HOM05D006551 ORTHO05D008546 5.4e-113 411.0 205 93.2
Sopen04g007100 Solanum pennellii HOM05D006551 ORTHO05D008546 2.0e-112 409.1 203 93.6
Nitab4.5_0000147g0330 Nicotiana tabacum HOM05D006551 ORTHO05D008546 7.1e-105 384.0 193 91.7
Peaxi162Scf00811g00222 Petunia axillaris HOM05D006551 ORTHO05D008546 3.6e-101 371.7 193 88.6
Nitab4.5_0006294g0080 Nicotiana tabacum HOM05D006551 ORTHO05D008546 4.1e-97 358.2 193 87.0
CSS0008489 Camellia sinensis var. sinensis HOM05D006551 ORTHO05D008546 1.2e-91 340.1 205 74.6
Dinv15335 Davidia involucrata HOM05D006551 ORTHO05D008546 1.2e-91 340.1 203 75.9
Sc17g0008010 Simmondsia chinensis HOM05D006551 ORTHO05D008546 2.6e-91 339.0 204 74.5
CSS0047745 Camellia sinensis var. sinensis HOM05D006551 ORTHO05D008546 5.8e-91 337.8 205 74.1
Migut.M01446 Erythranthe guttata HOM05D006551 ORTHO05D008546 1.1e-89 333.6 208 75.5
SalBow8G1397 Salvia bowleyana HOM05D006551 ORTHO05D008546 3.2e-89 332.0 221 70.1
SalBow8G2449 Salvia bowleyana HOM05D006551 ORTHO05D008546 3.2e-89 332.0 221 70.1
TAR629G1611 Trochodendron aralioides HOM05D006551 ORTHO05D008546 3.2e-89 332.0 203 74.4
Manes.09G083300 Manihot esculenta HOM05D006551 ORTHO05D008546 5.4e-89 331.3 204 73.0
MSTRG.7126 Avicennia marina HOM05D006551 ORTHO05D008546 1.2e-88 330.1 208 74.0
Eucgr.L00150 Eucalyptus grandis HOM05D006551 ORTHO05D008546 2.1e-88 329.3 204 71.1
Cfa000032 Carpinus fangiana HOM05D006551 ORTHO05D008546 4.6e-88 328.2 206 73.3
Cc09_g00290 Coffea canephora HOM05D006551 ORTHO05D008546 4.6e-88 328.2 203 75.9
FvH4_3g00300 Fragaria vesca HOM05D006551 ORTHO05D008546 6.0e-88 327.8 203 72.4
Aa31LG2G12400 Aethionema arabicum HOM05D006551 ORTHO05D008546 7.8e-88 327.4 205 72.7
TWI38G1730 Tripterygium wilfordii HOM05D006551 ORTHO05D008546 7.8e-88 327.4 206 72.8
RcHm_v2.0_Chr5g0000451 Rosa chinensis HOM05D006551 ORTHO05D008546 1.3e-87 326.6 202 72.8
Atru.chr1.1073 Acer truncatum HOM05D006551 ORTHO05D008546 5.1e-87 324.7 202 74.8
Thecc.06G241400 Theobroma cacao HOM05D006551 ORTHO05D008546 5.1e-87 324.7 203 72.4
Potri.006G004500 Populus trichocarpa HOM05D006551 ORTHO05D008546 6.6e-87 324.3 204 71.1
Prupe.4G003400 Prunus persica HOM05D006551 ORTHO05D008546 8.7e-87 323.9 202 72.3
Duzib160G0007 Durio zibethinus HOM05D006551 ORTHO05D008546 1.5e-86 323.2 203 72.4
QL05p067740 Quercus lobata HOM05D006551 ORTHO05D008546 4.3e-86 321.6 205 71.2
Ciclev10016440m.g Citrus clementina HOM05D006551 ORTHO05D008546 5.6e-86 321.2 202 71.3
Sabra06G0003800 Salix brachista HOM05D006551 ORTHO05D008546 1.6e-85 319.7 204 70.6
Medtr2g027110 Medicago truncatula HOM05D006551 ORTHO05D008546 4.8e-85 318.2 211 69.7
Lj1C1247T0 Lonicera japonica HOM05D006551 ORTHO05D008546 1.1e-84 317.0 205 73.2
Aqoxy1G04265 Aquilegia oxysepala HOM05D006551 ORTHO05D008546 1.4e-84 316.6 205 70.2
Hund08692 Selenicereus undatus HOM05D006551 ORTHO05D008546 1.4e-84 316.6 205 72.2
CiPaw.10G082200 Carya illinoinensis HOM05D006551 ORTHO05D008546 1.8e-84 316.2 204 70.6
A09p57680 Brassica napus HOM05D006551 ORTHO05D008546 2.4e-84 315.8 208 70.7
BraA09t41161Z Brassica rapa HOM05D006551 ORTHO05D008546 2.4e-84 315.8 207 71.5
DCAR_002245 Daucus carota HOM05D006551 ORTHO05D008546 2.4e-84 315.8 203 70.4
THA.LOC104815473 Tarenaya hassleriana HOM05D006551 ORTHO05D008546 2.4e-84 315.8 203 71.9
Lalb_Chr20g0119561 Lupinus albus HOM05D006551 ORTHO05D008546 4.0e-84 315.1 205 70.7
Ca_00765_v3 Cicer arietinum L. HOM05D006551 ORTHO05D008546 5.3e-84 314.7 205 70.7
Eucgr.E03850 Eucalyptus grandis HOM05D006551 ORTHO05D008546 6.9e-84 314.3 203 70.4
TPR.G17557 Trifolium pratense HOM05D006551 ORTHO05D008546 9.0e-84 313.9 207 70.0
SGA_v2.0_scaffold7G03692 Striga asiatica HOM05D006551 ORTHO05D008546 1.5e-83 313.2 194 74.2
Lj6g0027493 Lotus japonicus HOM05D006551 ORTHO05D008546 2.0e-83 312.8 205 69.8
EL10Ac8g20269 Beta vulgaris HOM05D006551 ORTHO05D008546 3.4e-83 312.0 210 68.6
BcaC07g41084 Brassica carinata HOM05D006551 ORTHO05D008546 3.4e-83 312.0 208 70.7
BcaC07g41085 Brassica carinata HOM05D006551 ORTHO05D008546 3.4e-83 312.0 208 70.7
C08p40880 Brassica napus HOM05D006551 ORTHO05D008546 3.4e-83 312.0 208 70.7
BolC8t51654H Brassica oleracea HOM05D006551 ORTHO05D008546 3.4e-83 312.0 208 70.7
AT2G22260 Arabidopsis thaliana HOM05D006551 ORTHO05D008546 4.5e-83 311.6 206 68.9
Gorai.011G008500 Gossypium raimondii HOM05D006551 ORTHO05D008546 4.5e-83 311.6 202 69.8
Phvul.006G137400 Phaseolus vulgaris HOM05D006551 ORTHO05D008546 4.5e-83 311.6 205 70.2
COL.COLO4_31943 Corchorus olitorius HOM05D000879 ORTHO05D002864 7.6e-83 310.8 202 69.8
Gohir.D10G007800 Gossypium hirsutum HOM05D006551 ORTHO05D008546 7.6e-83 310.8 202 69.3
AL4G11740 Arabidopsis lyrata HOM05D006551 ORTHO05D008546 9.9e-83 310.5 206 68.9
Gohir.A10G007900 Gossypium hirsutum HOM05D006551 ORTHO05D008546 9.9e-83 310.5 202 69.8
Ah.14g087400 Amaranthus hybridus HOM05D006551 ORTHO05D008546 2.2e-82 309.3 216 66.7
Phvul.006G137611 Phaseolus vulgaris HOM05D006551 ORTHO05D008546 2.2e-82 309.3 205 69.8
Carub.0004s0140 Capsella rubella HOM05D006551 ORTHO05D008546 2.9e-82 308.9 206 68.4
Lsat_1_v5_gn_7_12961 Lactuca sativa HOM05D006551 ORTHO05D008546 3.8e-82 308.5 205 69.3
Glyma.09G014800 Glycine max HOM05D006551 ORTHO05D008546 7.1e-81 304.3 208 68.3
MELO3C008006.2 Cucumis melo HOM05D006551 ORTHO05D008546 1.6e-80 303.1 204 67.6
AUR62021809 Chenopodium quinoa HOM05D006551 ORTHO05D008546 1.3e-79 300.1 203 67.5
MD10G1339500 Malus domestica HOM05D006551 ORTHO05D008546 1.3e-79 300.1 203 69.0
PGR042G3561 Punica granatum HOM05D006551 ORTHO05D008546 1.3e-79 300.1 206 66.0
Hma1.2p1_1175F.1_g264070 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 5.1e-79 298.1 204 69.1
ECA248G0604 Erigeron canadensis HOM05D006551 ORTHO05D008546 6.7e-79 297.7 204 65.7
CARHR113490 Cardamine hirsuta HOM05D006551 ORTHO05D008546 8.7e-79 297.4 205 67.3
unitig_37.g12177 Utricularia gibba HOM05D006551 ORTHO05D008546 1.1e-78 297.0 227 63.4
PSO210G0886 Papaver somniferum HOM05D006551 ORTHO05D008546 1.5e-78 296.6 204 67.2
PSO210G1263 Papaver somniferum HOM05D006551 ORTHO05D008546 7.4e-78 294.3 204 67.2
arahy.Tifrunner.gnm1.ann1.TFI8LM Arachis hypogaea HOM05D006551 ORTHO05D008546 1.3e-77 293.5 205 66.8
Solyc04g015080.4 Solanum lycopersicum HOM05D006551 ORTHO05D008546 1.6e-77 293.1 139 93.5
VMungo0540G0952 Vigna mungo HOM05D006551 ORTHO05D008546 1.6e-77 293.1 208 66.3
CsaV3_6G048230 Cucumis sativus L. HOM05D006551 ORTHO05D008546 3.6e-77 292.0 204 65.2
arahy.Tifrunner.gnm1.ann1.HFV92P Arachis hypogaea HOM05D006551 ORTHO05D008546 6.2e-77 291.2 205 66.3
HanXRQChr05g0129031 Helianthus annuus HOM05D006551 ORTHO05D008546 3.1e-76 288.9 202 65.3
Oeu025969.1 Olea europaea HOM05D006551 ORTHO05D008546 3.1e-76 288.9 170 74.1
HPP92_018202 Vanilla planifolia HOM05D006551 ORTHO05D008546 5.3e-76 288.1 203 67.0
Zm00001eb380830 Zea mays HOM05D006551 ORTHO05D008546 5.3e-76 288.1 202 66.8
Sed0011139 Sechium edule HOM05D006551 ORTHO05D008546 4.5e-75 285.0 203 66.0
ClCG01G021210 Citrullus lanatus HOM05D006551 ORTHO05D008546 1.7e-74 283.1 202 63.4
Cpa.g.sc27.224 Carica papaya HOM05D006551 ORTHO05D008546 2.2e-74 282.7 202 64.9
vmacro03605 Vaccinium macrocarpon HOM05D006551 ORTHO05D008546 3.2e-73 278.9 171 77.2
Psat1g172360 Pisum sativum HOM05D006551 ORTHO05D008546 1.3e-69 266.9 170 73.5
BcaB08g35054 Brassica carinata HOM05D006551 ORTHO05D008546 6.9e-68 261.2 178 68.0
SpUn1059_0010 Schrenkiella parvula HOM05D006551 ORTHO05D008546 9.0e-68 260.8 169 72.8
Nn1g07524 Nelumbo nucifera HOM05D006551 ORTHO05D008546 7.9e-64 247.7 134 78.4
Hma1.2p1_1175F.1_g264060 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 2.5e-62 242.7 133 79.7
AUR62012856 Chenopodium quinoa HOM05D006551 ORTHO05D008546 1.3e-61 240.4 170 67.1
PGR004G0828 Punica granatum HOM05D006551 ORTHO05D008546 2.1e-61 239.6 134 77.6
ATR0751G145 Amborella trichopoda HOM05D006551 ORTHO05D008546 3.7e-61 238.8 166 67.5
Peaxi162Scf00827g00057 Petunia axillaris HOM05D006551 ORTHO05D008546 1.5e-59 233.4 163 71.8
Haze_07021 Corylus avellana HOM05D006551 ORTHO05D008546 4.5e-59 231.9 202 57.9
Eucgr.E03848 Eucalyptus grandis HOM05D006551 ORTHO05D008546 2.9e-58 229.2 138 70.3
Rhsim13G0140300 Rhododendron simsii HOM05D006551 ORTHO05D008546 3.2e-57 225.7 138 71.7
AagrBONN_evm.TU.Sc2ySwM_362.1805 Anthoceros agrestis HOM05D006551 ORTHO05D008546 3.7e-53 212.2 277 43.0
SEGI_23146 Sequoiadendron giganteum HOM05D006551 ORTHO05D008546 1.1e-49 200.7 225 47.1
AagrBONN_evm.TU.Sc2ySwM_369.541 Anthoceros agrestis HOM05D006551 ORTHO05D008546 3.4e-43 179.1 229 39.7
SHI31451 Sapria himalayana HOM05D006551 ORTHO05D008546 1.2e-40 170.6 114 71.9
CBR_g3891 Chara braunii HOM05D006551 ORTHO05D008546 2.5e-33 146.4 135 48.9
Sed0010073 Sechium edule HOM05D006551 ORTHO05D008546 4.4e-30 135.6 184 40.8
Glyma.15G120500 Glycine max HOM05D006551 ORTHO05D008546 5.3e-28 128.6 113 60.2
Psat2g019160 Pisum sativum HOM05D006551 ORTHO05D008546 6.5e-26 121.7 76 65.8
SHI31456 Sapria himalayana HOM05D006551 ORTHO05D008546 1.1e-25 120.9 92 57.6
Solyc12g056880.2 Solanum lycopersicum HOM05D006551 ORTHO05D008546 8.6e-18 94.7 96 56.2
Hma1.2p1_1322F.1_g275500 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 2.1e-16 90.1 65 67.7
Cfa024106 Carpinus fangiana HOM05D006551 ORTHO05D008546 1.2e-14 84.3 119 42.9
VMungo0540G1474 Vigna mungo HOM05D006551 ORTHO05D008546 9.8e-14 81.3 68 61.8
Pp3c2_11520 Physcomitrium patens HOM05D006551 ORTHO05D008546 3.7e-13 79.3 119 37.8
PRCOL_00003886 Prasinoderma coloniale HOM05D006551 ORTHO05D044110 1.9e-09 67.0 183 27.9
PRCOL_00002494 Prasinoderma coloniale HOM05D006551 ORTHO05D008546 2.5e-09 66.6 118 33.9
PRCOL_00000148 Prasinoderma coloniale HOM05D006551 ORTHO05D008546 1.6e-08 63.9 190 26.8
PRCOL_00002998 Prasinoderma coloniale HOM05D006551 ORTHO05D008546 1.6e-08 63.9 156 29.5
Sp4g01310 Schrenkiella parvula HOM05D006551 ORTHO05D008546 3.6e-08 62.8 37 62.2
Cfa024972 Carpinus fangiana HOM05D006551 ORTHO05D043702 1.4e-07 60.8 133 33.8


User provided reference genes

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