Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1058.44 Capsicum annuum HOM05D003283 ORTHO05D115299 2.1e-82 308.9 150 100.0
Solyc03g113000.3 Solanum lycopersicum HOM05D003283 ORTHO05D004037 4.3e-11 72.0 45 77.8
Sopen03g032070 Solanum pennellii HOM05D003283 ORTHO05D004037 4.3e-11 72.0 45 77.8
CAN.G1305.11 Capsicum annuum HOM05D003283 ORTHO05D004037 5.7e-11 71.6 45 77.8
PGSC0003DMG400018089 Solanum tuberosum HOM05D003283 ORTHO05D004037 1.7e-10 70.1 45 75.6
Nitab4.5_0010552g0010 Nicotiana tabacum HOM05D003283 ORTHO05D004037 2.2e-10 69.7 45 75.6
Peaxi162Scf00009g00230 Petunia axillaris HOM05D003283 ORTHO05D004037 1.1e-09 67.4 45 73.3
Nitab4.5_0000785g0040 Nicotiana tabacum HOM05D003283 ORTHO05D004037 1.5e-08 63.5 45 71.1
AUR62014508 Chenopodium quinoa HOM05D003283 ORTHO05D004037 7.7e-08 61.2 46 58.7
Phvul.008G122500 Phaseolus vulgaris HOM05D003283 ORTHO05D004037 7.7e-08 61.2 38 65.8
Psat3g142840 Pisum sativum HOM05D003283 ORTHO05D004037 7.7e-08 61.2 38 71.1
unitig_46.g18384 Utricularia gibba HOM05D003283 ORTHO05D004037 7.7e-08 61.2 45 60.0
Ca_22682_v3 Cicer arietinum L. HOM05D003283 ORTHO05D004037 1.3e-07 60.5 38 68.4
Dinv19938 Davidia involucrata HOM05D003283 ORTHO05D004037 1.3e-07 60.5 45 62.2
Medtr7g059230 Medicago truncatula HOM05D003283 ORTHO05D004037 1.3e-07 60.5 38 68.4
AUR62038027 Chenopodium quinoa HOM05D003283 ORTHO05D004037 1.7e-07 60.1 44 59.1
arahy.Tifrunner.gnm1.ann1.I6X9WR Arachis hypogaea HOM05D003283 ORTHO05D004037 2.2e-07 59.7 38 68.4
ECA246G5347 Erigeron canadensis HOM05D003283 ORTHO05D004037 2.2e-07 59.7 59 54.2
PGR044G0877 Punica granatum HOM05D003283 ORTHO05D004037 2.2e-07 59.7 49 63.3
Lalb_Chr19g0125481 Lupinus albus HOM05D003283 ORTHO05D004037 2.9e-07 59.3 38 68.4
QL10p016258 Quercus lobata HOM05D003283 ORTHO05D004037 2.9e-07 59.3 45 60.0
TAR371G0980 Trochodendron aralioides HOM05D003283 ORTHO05D004037 2.9e-07 59.3 42 61.9
HanXRQChr05g0158061 Helianthus annuus HOM05D003283 ORTHO05D004037 3.8e-07 58.9 45 57.8
Hma1.2p1_0735F.1_g210410 Hydrangea macrophylla HOM05D003283 ORTHO05D004037 3.8e-07 58.9 45 60.0
Actinidia04907 Actinidia chinensis HOM05D003283 ORTHO05D004037 5.0e-07 58.5 45 60.0
arahy.Tifrunner.gnm1.ann1.N5P3C8 Arachis hypogaea HOM05D003283 ORTHO05D004037 5.0e-07 58.5 38 65.8
arahy.Tifrunner.gnm1.ann1.Q5PT82 Arachis hypogaea HOM05D003283 ORTHO05D004037 5.0e-07 58.5 38 65.8
arahy.Tifrunner.gnm1.ann1.TFBQ7Q Arachis hypogaea HOM05D003283 ORTHO05D004037 5.0e-07 58.5 38 65.8
Potri.015G063100 Populus trichocarpa HOM05D003283 ORTHO05D004037 8.5e-07 57.8 38 63.2
SalBow5G0915 Salvia bowleyana HOM05D003283 ORTHO05D004037 8.5e-07 57.8 45 57.8
SalBow5G1222 Salvia bowleyana HOM05D003283 ORTHO05D004037 8.5e-07 57.8 45 57.8
EL10Ac1g00662 Beta vulgaris HOM05D003283 ORTHO05D004037 1.1e-06 57.4 45 55.6
CiPaw.11G042000 Carya illinoinensis HOM05D003283 ORTHO05D004037 1.1e-06 57.4 48 56.2
Aqoxy3G03338 Aquilegia oxysepala HOM05D003283 ORTHO05D004037 1.4e-06 57.0 45 55.6
Rhsim08G0157300 Rhododendron simsii HOM05D003283 ORTHO05D004037 1.4e-06 57.0 45 60.0
CSS0033711 Camellia sinensis var. sinensis HOM05D003283 ORTHO05D004037 1.9e-06 56.6 37 64.9
MBI05_g00384_MAGBIO Magnolia biondii HOM05D003283 ORTHO05D004037 1.9e-06 56.6 45 55.6
Glyma.18G175500 Glycine max HOM05D003283 ORTHO05D004037 2.5e-06 56.2 38 60.5
SGA_v2.0_scaffold56G20036 Striga asiatica HOM05D003283 ORTHO05D004037 2.5e-06 56.2 37 67.6
TPR.G23258 Trifolium pratense HOM05D003283 ORTHO05D004037 2.5e-06 56.2 38 63.2
DCAR_009634 Daucus carota HOM05D003283 ORTHO05D004037 3.2e-06 55.8 45 57.8
THA.LOC104821426 Tarenaya hassleriana HOM05D003283 ORTHO05D004037 3.2e-06 55.8 42 59.5
VMungo1383G2254 Vigna mungo HOM05D003283 ORTHO05D004037 3.2e-06 55.8 38 60.5
CANSAT80G1070 Cannabis sativa HOM05D003283 ORTHO05D004037 4.2e-06 55.5 46 56.5
Cc04_g17070 Coffea canephora HOM05D003283 ORTHO05D004037 4.2e-06 55.5 45 57.8
DCAR_002380 Daucus carota HOM05D003283 ORTHO05D004037 4.2e-06 55.5 45 57.8
Lj1g0007970 Lotus japonicus HOM05D003283 ORTHO05D004037 4.2e-06 55.5 38 63.2
vmacro17558 Vaccinium macrocarpon HOM05D003283 ORTHO05D004037 4.2e-06 55.5 45 55.6
CSS0016081 Camellia sinensis var. sinensis HOM05D003283 ORTHO05D004037 5.5e-06 55.1 36 63.9
Glyma.08G357000 Glycine max HOM05D003283 ORTHO05D004037 5.5e-06 55.1 38 60.5
COL.COLO4_08427 Corchorus olitorius HOM05D003283 ORTHO05D004037 7.2e-06 54.7 44 56.8
Migut.I00154 Erythranthe guttata HOM05D003283 ORTHO05D004037 7.2e-06 54.7 45 55.6
Gohir.D12G179200 Gossypium hirsutum HOM05D003283 ORTHO05D004037 7.2e-06 54.7 35 62.9
Gorai.008G191900 Gossypium raimondii HOM05D003283 ORTHO05D004037 7.2e-06 54.7 35 62.9
GSVIVG01008031001 Vitis vinifera HOM05D003283 ORTHO05D004037 7.2e-06 54.7 43 60.5
Cfa018966 Carpinus fangiana HOM05D003283 ORTHO05D004037 9.4e-06 54.3 45 55.6
Manes.06G094600 Manihot esculenta HOM05D003283 ORTHO05D004037 9.4e-06 54.3 48 54.2
Sabra15G0088300 Salix brachista HOM05D003283 ORTHO05D004037 9.4e-06 54.3 38 57.9


User provided reference genes

Program Settings