Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1057.23 Capsicum annuum HOM05D004741 ORTHO05D005454 1.9e-95 352.4 167 100.0
CAN.G673.1 Capsicum annuum HOM05D004741 ORTHO05D005454 1.7e-16 90.1 139 38.8
Solyc07g017640.2 Solanum lycopersicum HOM05D004741 ORTHO05D005454 2.2e-16 89.7 255 28.2
Sopen07g006470 Solanum pennellii HOM05D004741 ORTHO05D005454 2.9e-16 89.4 139 38.1
Nitab4.5_0006397g0010 Nicotiana tabacum HOM05D004741 ORTHO05D005454 5.0e-16 88.6 107 45.8
PGSC0003DMG400002300 Solanum tuberosum HOM05D004741 ORTHO05D005454 6.5e-16 88.2 139 38.1
vmacro21376 Vaccinium macrocarpon HOM05D004741 ORTHO05D005454 8.5e-16 87.8 109 44.0
Peaxi162Scf00005g04810 Petunia axillaris HOM05D004741 ORTHO05D005454 1.9e-15 86.7 107 45.8
EL10Ac1g02297 Beta vulgaris HOM05D004741 ORTHO05D005454 1.2e-14 84.0 107 43.0
Gohir.D11G176300 Gossypium hirsutum HOM05D004741 ORTHO05D005454 1.2e-14 84.0 107 42.1
Rhsim06G0068400 Rhododendron simsii HOM05D004741 ORTHO05D005454 1.2e-14 84.0 109 45.0
ATR0767G225 Amborella trichopoda HOM05D004741 ORTHO05D005454 2.7e-14 82.8 107 43.9
CSS0005545 Camellia sinensis var. sinensis HOM05D004741 ORTHO05D005454 2.7e-14 82.8 107 43.0
Sc02g0008350 Simmondsia chinensis HOM05D004741 ORTHO05D005454 2.7e-14 82.8 107 43.0
Cc00_g23510 Coffea canephora HOM05D004741 ORTHO05D005454 3.6e-14 82.4 107 42.1
Oeu016078.1 Olea europaea HOM05D004741 ORTHO05D005454 3.6e-14 82.4 115 41.7
Cpa.g.sc40.1 Carica papaya HOM05D004741 ORTHO05D005454 8.0e-14 81.3 107 43.0
HanXRQChr10g0277671 Helianthus annuus HOM05D004741 ORTHO05D005454 1.0e-13 80.9 107 43.0
A03p60970 Brassica napus HOM05D004741 ORTHO05D005454 1.8e-13 80.1 107 41.1
A08p18460 Brassica napus HOM05D004741 ORTHO05D005454 1.8e-13 80.1 107 42.1
BraA03t15138Z Brassica rapa HOM05D004741 ORTHO05D005454 1.8e-13 80.1 107 41.1
AUR62033828 Chenopodium quinoa HOM05D004741 ORTHO05D005454 1.8e-13 80.1 107 42.1
AUR62035754 Chenopodium quinoa HOM05D004741 ORTHO05D005454 1.8e-13 80.1 107 42.1
Gohir.1Z049533 Gossypium hirsutum HOM05D004741 ORTHO05D005454 1.8e-13 80.1 115 39.1
Lalb_Chr08g0244491 Lupinus albus HOM05D004741 ORTHO05D005454 1.8e-13 80.1 107 41.1
MD08G1051300 Malus domestica HOM05D004741 ORTHO05D005454 1.8e-13 80.1 112 41.1
Thecc.09G013800 Theobroma cacao HOM05D004741 ORTHO05D005454 1.8e-13 80.1 107 41.1
TWI32G1217 Tripterygium wilfordii HOM05D004741 ORTHO05D005454 1.8e-13 80.1 107 42.1
BcaNung01502 Brassica carinata HOM05D004741 ORTHO05D005454 2.3e-13 79.7 107 41.1
C07p58870 Brassica napus HOM05D004741 ORTHO05D005454 2.3e-13 79.7 107 41.1
BolC7t46334H Brassica oleracea HOM05D004741 ORTHO05D005454 2.3e-13 79.7 107 41.1
Gohir.A05G415901 Gossypium hirsutum HOM05D004741 ORTHO05D005454 2.3e-13 79.7 66 54.5
SalBow7G0863 Salvia bowleyana HOM05D004741 ORTHO05D005454 3.0e-13 79.3 109 43.1
SalBow7G1987 Salvia bowleyana HOM05D004741 ORTHO05D005454 3.0e-13 79.3 109 43.1
THA.LOC104803607 Tarenaya hassleriana HOM05D004741 ORTHO05D005454 3.0e-13 79.3 107 42.1
Aqoxy4G02579 Aquilegia oxysepala HOM05D004741 ORTHO05D005454 4.0e-13 79.0 74 52.7
COL.COLO4_18967 Corchorus olitorius HOM05D004741 ORTHO05D005454 4.0e-13 79.0 107 40.2
DCAR_020033 Daucus carota HOM05D004741 ORTHO05D005454 4.0e-13 79.0 107 42.1
AL7G20240 Arabidopsis lyrata HOM05D004741 ORTHO05D005454 5.2e-13 78.6 92 44.6
AT4G31770 Arabidopsis thaliana HOM05D004741 ORTHO05D005454 5.2e-13 78.6 92 44.6
Cfa013018 Carpinus fangiana HOM05D004741 ORTHO05D005454 5.2e-13 78.6 107 42.1
Duzib168G2074 Durio zibethinus HOM05D004741 ORTHO05D005454 5.2e-13 78.6 107 40.2
Prupe.1G397300 Prunus persica HOM05D004741 ORTHO05D005454 5.2e-13 78.6 107 41.1
Hund05236 Selenicereus undatus HOM05D004741 ORTHO05D005454 5.2e-13 78.6 107 43.0
C03p87550 Brassica napus HOM05D004741 ORTHO05D005454 6.7e-13 78.2 108 40.7
BolC3t21075H Brassica oleracea HOM05D004741 ORTHO05D005454 6.7e-13 78.2 108 40.7
RcHm_v2.0_Chr6g0299131 Rosa chinensis HOM05D004741 ORTHO05D005454 6.7e-13 78.2 107 41.1
GSVIVG01009251001 Vitis vinifera HOM05D004741 ORTHO05D005454 6.7e-13 78.2 66 57.6
Atru.chr7.2571 Acer truncatum HOM05D004741 ORTHO05D005454 8.8e-13 77.8 68 54.4
Aa31LG2G18560 Aethionema arabicum HOM05D004741 ORTHO05D005454 8.8e-13 77.8 92 44.6
Ah.04g152730 Amaranthus hybridus HOM05D004741 ORTHO05D005454 8.8e-13 77.8 107 41.1
BcaNung04120 Brassica carinata HOM05D004741 ORTHO05D005454 8.8e-13 77.8 107 40.2
Gohir.A07G233600 Gossypium hirsutum HOM05D004741 ORTHO05D005454 8.8e-13 77.8 71 50.7
MBI16_g14670_MAGBIO Magnolia biondii HOM05D004741 ORTHO05D005454 8.8e-13 77.8 107 43.0
PSO210G2241 Papaver somniferum HOM05D004741 ORTHO05D005454 8.8e-13 77.8 66 57.6
BcaB03g12718 Brassica carinata HOM05D004741 ORTHO05D005454 1.2e-12 77.4 92 44.6
MD15G1043800 Malus domestica HOM05D004741 ORTHO05D005454 1.2e-12 77.4 107 41.1
PSO761G0470 Papaver somniferum HOM05D004741 ORTHO05D005454 1.2e-12 77.4 66 57.6
CARHR239670 Cardamine hirsuta HOM05D004741 ORTHO05D005454 1.5e-12 77.0 92 43.5
Thhalv10025305m.g Eutrema salsugineum HOM05D004741 ORTHO05D005454 1.5e-12 77.0 92 42.4
SEGI_18909 Sequoiadendron giganteum HOM05D004741 ORTHO05D005454 1.5e-12 77.0 107 41.1
MSTRG.20476 Avicennia marina HOM05D004741 ORTHO05D005454 2.0e-12 76.6 107 42.1
Gohir.A12G001100 Gossypium hirsutum HOM05D004741 ORTHO05D005454 2.0e-12 76.6 71 49.3
BraA08t33808Z Brassica rapa HOM05D004741 ORTHO05D005454 3.3e-12 75.9 92 43.5
Carub.0007s0879 Capsella rubella HOM05D004741 ORTHO05D005454 3.3e-12 75.9 65 58.5
RcHm_v2.0_Chr1g0357361 Rosa chinensis HOM05D004741 ORTHO05D005454 3.3e-12 75.9 107 40.2
SMO145G0212 Selaginella moellendorffii HOM05D004741 ORTHO05D005454 3.3e-12 75.9 69 53.6
SMO284G0001 Selaginella moellendorffii HOM05D004741 ORTHO05D005454 3.3e-12 75.9 69 53.6
Eucgr.C04030 Eucalyptus grandis HOM05D004741 ORTHO05D005454 4.4e-12 75.5 107 39.3
Lsat_1_v5_gn_6_106561 Lactuca sativa HOM05D004741 ORTHO05D005454 4.4e-12 75.5 107 42.1
FvH4_2g41360 Fragaria vesca HOM05D004741 ORTHO05D005454 5.7e-12 75.1 107 40.2
FAN15G2922 Fragaria x ananassa HOM05D004741 ORTHO05D005454 5.7e-12 75.1 107 40.2
Lj1g0020479 Lotus japonicus HOM05D004741 ORTHO05D005454 5.7e-12 75.1 107 42.1
Nn8g39668 Nelumbo nucifera HOM05D004741 ORTHO05D005454 5.7e-12 75.1 66 57.6
unitig_744.g24377 Utricularia gibba HOM05D004741 ORTHO05D005454 5.7e-12 75.1 107 39.3
ECA246G1320 Erigeron canadensis HOM05D004741 ORTHO05D005454 7.5e-12 74.7 107 42.1
Migut.K00575 Erythranthe guttata HOM05D004741 ORTHO05D005454 7.5e-12 74.7 107 39.3
Glyma.04G059700 Glycine max HOM05D004741 ORTHO05D005454 7.5e-12 74.7 66 57.6
Lsat_1_v5_gn_4_135621 Lactuca sativa HOM05D004741 ORTHO05D005454 7.5e-12 74.7 107 41.1
Zm00001eb215780 Zea mays HOM05D004741 ORTHO05D005454 7.5e-12 74.7 66 54.5
Aqoxy5G01951 Aquilegia oxysepala HOM05D004741 ORTHO05D005454 9.7e-12 74.3 66 56.1
Sp7g29560 Schrenkiella parvula HOM05D004741 ORTHO05D005454 1.3e-11 73.9 92 42.4
CBR_g10907 Chara braunii HOM05D004741 ORTHO05D005454 2.2e-11 73.2 132 34.8
Dinv22023 Davidia involucrata HOM05D004741 ORTHO05D005454 2.2e-11 73.2 66 54.5
Potri.018G015300 Populus trichocarpa HOM05D004741 ORTHO05D005454 2.2e-11 73.2 107 39.3
Gohir.A12G000500 Gossypium hirsutum HOM05D004741 ORTHO05D005454 2.8e-11 72.8 60 56.7
Manes.03G006700 Manihot esculenta HOM05D004741 ORTHO05D005454 2.8e-11 72.8 107 40.2
TAR625G0772 Trochodendron aralioides HOM05D004741 ORTHO05D005454 2.8e-11 72.8 107 40.2
Phvul.009G085900 Phaseolus vulgaris HOM05D004741 ORTHO05D005454 3.7e-11 72.4 66 56.1
Sed0002897 Sechium edule HOM05D004741 ORTHO05D005454 3.7e-11 72.4 66 54.5
VMungo1309G1293 Vigna mungo HOM05D004741 ORTHO05D005454 3.7e-11 72.4 65 56.9
Mapoly0014s0124 Marchantia polymorpha HOM05D004741 ORTHO05D005454 4.8e-11 72.0 66 48.5
Lj4A81G69 Lonicera japonica HOM05D004741 ORTHO05D005454 6.3e-11 71.6 64 54.7
Sabra18G0018800 Salix brachista HOM05D004741 ORTHO05D005454 8.2e-11 71.2 66 53.0
Atru.BG.288.p Acer truncatum HOM05D004741 ORTHO05D005454 1.1e-10 70.9 57 57.9
Aqoxy1G00870 Aquilegia oxysepala HOM05D004741 ORTHO05D005454 1.1e-10 70.9 68 50.0
Dinv44899 Davidia involucrata HOM05D004741 ORTHO05D005454 1.1e-10 70.9 66 51.5
CiPaw.07G232700 Carya illinoinensis HOM05D004741 ORTHO05D005454 1.4e-10 70.5 66 53.0
QL02p018098 Quercus lobata HOM05D004741 ORTHO05D005454 1.4e-10 70.5 109 40.4
BcaNung01500 Brassica carinata HOM05D004741 ORTHO05D005454 1.8e-10 70.1 73 52.1
Ca_15788_v3 Cicer arietinum L. HOM05D004741 ORTHO05D005454 1.8e-10 70.1 66 54.5
ATR0582G232 Amborella trichopoda HOM05D004741 ORTHO05D005454 2.4e-10 69.7 69 50.7
AagrBONN_evm.TU.Sc2ySwM_369.559 Anthoceros agrestis HOM05D004741 ORTHO05D005454 2.4e-10 69.7 66 50.0
CDE06G0415 Ceratophyllum demersum HOM05D004741 ORTHO05D005454 3.1e-10 69.3 66 51.5
MELO3C011313.2 Cucumis melo HOM05D004741 ORTHO05D005454 3.1e-10 69.3 66 53.0
SGA_v2.0_scaffold443G51691 Striga asiatica HOM05D004741 ORTHO05D005454 3.1e-10 69.3 64 50.0
TPR.G1862 Trifolium pratense HOM05D004741 ORTHO05D005454 3.1e-10 69.3 66 51.5
Medtr3g105810 Medicago truncatula HOM05D004741 ORTHO05D005454 4.1e-10 68.9 66 51.5
HPP92_007721 Vanilla planifolia HOM05D004741 ORTHO05D005454 7.0e-10 68.2 65 46.2
arahy.Tifrunner.gnm1.ann1.68HE9A Arachis hypogaea HOM05D004741 ORTHO05D005454 9.1e-10 67.8 66 51.5
arahy.Tifrunner.gnm1.ann1.HM8GSV Arachis hypogaea HOM05D004741 ORTHO05D005454 9.1e-10 67.8 66 51.5
Gohir.A04G148266 Gossypium hirsutum HOM05D004741 ORTHO05D005454 9.1e-10 67.8 66 50.0
ClCG08G013810 Citrullus lanatus HOM05D004741 ORTHO05D005454 1.6e-09 67.0 66 51.5
CsaV3_2G032600 Cucumis sativus L. HOM05D004741 ORTHO05D005454 2.0e-09 66.6 66 51.5
MCO02G476 Micromonas commoda HOM05D004741 ORTHO05D005454 3.5e-09 65.9 67 47.8
Gohir.1Z049489 Gossypium hirsutum HOM05D004741 ORTHO05D005454 5.9e-09 65.1 57 49.1
Pp3c24_19510 Physcomitrium patens HOM05D004741 ORTHO05D005454 7.7e-09 64.7 67 46.3
Psat5g034520 Pisum sativum HOM05D004741 ORTHO05D005454 1.0e-08 64.3 65 49.2
Gohir.A07G000083 Gossypium hirsutum HOM05D004741 ORTHO05D005454 6.5e-08 61.6 50 56.0
RcHm_v2.0_Chr2g0135121 Rosa chinensis HOM05D004741 ORTHO05D005454 1.9e-07 60.1 65 47.7
FvH4_6g29560 Fragaria vesca HOM05D004741 ORTHO05D005454 2.5e-07 59.7 68 48.5
SGA_v2.0_scaffold48G18066 Striga asiatica HOM05D004741 ORTHO05D005454 5.5e-07 58.5 53 50.9
Gohir.A02G000200 Gossypium hirsutum HOM05D004741 ORTHO05D005454 1.2e-06 57.4 42 54.8
Cre02.g146950 Chlamydomonas reinhardtii HOM05D004741 ORTHO05D005454 1.6e-06 57.0 44 52.3
FAN14G3005 Fragaria x ananassa HOM05D004741 ORTHO05D005454 8.0e-06 54.7 68 47.1


User provided reference genes

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