Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1021.1 Capsicum annuum HOM05D007322 ORTHO05D009029 5.0e-245 851.3 660 100.0
Sopen11g018100 Solanum pennellii HOM05D007322 ORTHO05D009029 1.5e-156 557.4 644 82.0
Solyc11g040260.2 Solanum lycopersicum HOM05D007322 ORTHO05D009029 1.7e-155 553.9 644 81.8
Dinv24285 Davidia involucrata HOM05D007322 ORTHO05D009029 6.3e-139 498.8 664 70.2
GSVIVG01022920001 Vitis vinifera HOM05D007322 ORTHO05D009029 2.8e-134 483.4 650 72.6
TWI14G1121 Tripterygium wilfordii HOM05D007322 ORTHO05D009029 5.7e-132 475.7 592 76.9
CSS0017191 Camellia sinensis var. sinensis HOM05D007322 ORTHO05D009029 4.9e-131 472.6 587 74.3
Sed0025924 Sechium edule HOM05D007322 ORTHO05D009029 3.1e-130 469.9 651 71.0
Hma1.2p1_0217F.1_g092060 Hydrangea macrophylla HOM05D007322 ORTHO05D009029 2.5e-127 460.3 584 73.3
Potri.003G019000 Populus trichocarpa HOM05D007322 ORTHO05D009029 6.1e-126 455.7 602 72.9
Migut.B00834 Erythranthe guttata HOM05D007322 ORTHO05D009029 8.0e-126 455.3 590 73.7
MD15G1423900 Malus domestica HOM05D007322 ORTHO05D009029 8.0e-126 455.3 617 71.3
Prupe.1G569600 Prunus persica HOM05D007322 ORTHO05D009029 1.4e-125 454.5 588 74.1
Potri.001G211300 Populus trichocarpa HOM05D007322 ORTHO05D009029 1.5e-124 451.1 587 74.3
Sabra03G0010600 Salix brachista HOM05D007322 ORTHO05D009029 7.5e-124 448.7 594 73.4
CsaV3_3G043150 Cucumis sativus L. HOM05D007322 ORTHO05D009029 4.9e-123 446.0 591 72.3
RcHm_v2.0_Chr7g0222211 Rosa chinensis HOM05D007322 ORTHO05D009029 4.9e-123 446.0 587 73.4
Cc02_g22530 Coffea canephora HOM05D007322 ORTHO05D009029 1.1e-122 444.9 580 74.7
Duzib132G0092 Durio zibethinus HOM05D007322 ORTHO05D009029 7.0e-122 442.2 584 71.9
Cfa005519 Carpinus fangiana HOM05D007322 ORTHO05D009029 2.7e-121 440.3 588 74.0
MELO3C026617.2 Cucumis melo HOM05D007322 ORTHO05D009029 3.5e-121 439.9 594 71.4
Thecc.02G087000 Theobroma cacao HOM05D007322 ORTHO05D009029 2.3e-120 437.2 584 76.0
CiPaw.05G044700 Carya illinoinensis HOM05D007322 ORTHO05D009029 3.0e-120 436.8 562 77.8
FvH4_5g29340 Fragaria vesca HOM05D007322 ORTHO05D009029 3.9e-120 436.4 583 74.3
Carub.0001s1049 Capsella rubella HOM05D007322 ORTHO05D009029 4.3e-119 433.0 585 73.2
FAN18G2556 Fragaria x ananassa HOM05D007322 ORTHO05D009029 5.6e-119 432.6 583 74.4
QL10p025368 Quercus lobata HOM05D007322 ORTHO05D009029 1.1e-117 428.3 702 49.3
Thhalv10007006m.g Eutrema salsugineum HOM05D007322 ORTHO05D009029 3.1e-117 426.8 591 70.7
Rhsim01G0008000 Rhododendron simsii HOM05D007322 ORTHO05D009029 1.5e-116 424.5 589 73.7
Sp1g09630 Schrenkiella parvula HOM05D007322 ORTHO05D009029 1.5e-116 424.5 585 68.0
THA.LOC104816934 Tarenaya hassleriana HOM05D007322 ORTHO05D009029 2.0e-116 424.1 583 72.6
Lsat_1_v5_gn_5_105200 Lactuca sativa HOM05D007322 ORTHO05D009029 2.6e-116 423.7 623 69.2
PGR042G2216 Punica granatum HOM05D007322 ORTHO05D009029 7.5e-116 422.2 632 67.6
BraA06t23970Z Brassica rapa HOM05D007322 ORTHO05D009029 1.7e-115 421.0 585 67.7
CARHR011130 Cardamine hirsuta HOM05D007322 ORTHO05D009029 2.2e-115 420.6 587 71.0
AT1G10910 Arabidopsis thaliana HOM05D007322 ORTHO05D009029 3.7e-115 419.9 585 70.6
BcaNung04765 Brassica carinata HOM05D007322 ORTHO05D009029 3.7e-115 419.9 585 67.9
A06p07690 Brassica napus HOM05D007322 ORTHO05D009029 3.7e-115 419.9 585 69.4
BcaC05g24974 Brassica carinata HOM05D007322 ORTHO05D009029 4.9e-115 419.5 583 67.8
COL.COLO4_11791 Corchorus olitorius HOM05D007322 ORTHO05D009029 4.9e-115 419.5 584 72.4
C05p09280 Brassica napus HOM05D007322 ORTHO05D009029 6.4e-115 419.1 585 69.6
BolC5t29668H Brassica oleracea HOM05D007322 ORTHO05D009029 1.4e-114 417.9 583 69.6
Gohir.D02G214700 Gossypium hirsutum HOM05D007322 ORTHO05D009029 1.2e-113 414.8 590 71.2
Glyma.08G186600 Glycine max HOM05D007322 ORTHO05D009029 2.7e-113 413.7 621 64.7
Gorai.005G242500 Gossypium raimondii HOM05D007322 ORTHO05D009029 2.7e-113 413.7 590 71.7
HanXRQChr10g0290611 Helianthus annuus HOM05D007322 ORTHO05D009029 3.0e-112 410.2 596 68.3
Manes.07G016500 Manihot esculenta HOM05D007322 ORTHO05D009029 3.0e-112 410.2 533 76.5
Gohir.A03G193600 Gossypium hirsutum HOM05D007322 ORTHO05D009029 1.9e-111 407.5 584 71.6
Lj6g0009763 Lotus japonicus HOM05D007322 ORTHO05D009029 7.3e-111 405.6 610 66.4
Ciclev10000525m.g Citrus clementina HOM05D007322 ORTHO05D009029 9.5e-111 405.2 591 70.2
Lj9C305T7 Lonicera japonica HOM05D007322 ORTHO05D009029 2.8e-110 403.7 658 57.4
Atru.chr6.627 Acer truncatum HOM05D007322 ORTHO05D009029 3.1e-109 400.2 531 74.4
Psat1g220200 Pisum sativum HOM05D007322 ORTHO05D009029 3.4e-108 396.7 593 67.3
Aqoxy6G00206 Aquilegia oxysepala HOM05D007322 ORTHO05D009029 6.4e-107 392.5 651 67.0
MBI04_g34119_MAGBIO Magnolia biondii HOM05D007322 ORTHO05D009029 8.3e-107 392.1 635 67.1
Aa31LG1G3950 Aethionema arabicum HOM05D007322 ORTHO05D009029 7.1e-106 389.0 583 71.2
TAR381G0036 Trochodendron aralioides HOM05D007322 ORTHO05D009029 1.1e-103 381.7 664 66.7
Medtr2g007030 Medicago truncatula HOM05D007322 ORTHO05D009029 1.1e-101 375.2 588 65.8
Nn5g28260 Nelumbo nucifera HOM05D007322 ORTHO05D009029 1.8e-101 374.4 580 72.4
vmacro19889 Vaccinium macrocarpon HOM05D007322 ORTHO05D009029 1.8e-101 374.4 571 70.6
AL1G21890 Arabidopsis lyrata HOM05D007322 ORTHO05D009029 8.9e-101 372.1 529 73.3
EL10Ac6g14069 Beta vulgaris HOM05D007322 ORTHO05D009029 2.2e-99 367.5 629 64.7
Lalb_Chr20g0123451 Lupinus albus HOM05D007322 ORTHO05D009029 4.9e-99 366.3 579 66.8
Phvul.006G214900 Phaseolus vulgaris HOM05D007322 ORTHO05D009029 3.5e-97 360.1 544 72.2
Nitab4.5_0000001g0160 Nicotiana tabacum HOM05D007322 ORTHO05D009029 1.0e-96 358.6 229 79.9
Nitab4.5_0003788g0020 Nicotiana tabacum HOM05D007322 ORTHO05D009029 1.7e-96 357.8 202 87.6
TPR.G2112 Trifolium pratense HOM05D007322 ORTHO05D009029 2.4e-93 347.4 614 64.3
Haze_01685 Corylus avellana HOM05D007322 ORTHO05D009029 1.1e-87 328.6 213 75.1
ATR0026G013 Amborella trichopoda HOM05D007322 ORTHO05D009029 1.9e-87 327.8 590 66.6
arahy.Tifrunner.gnm1.ann1.YY4I9I Arachis hypogaea HOM05D007322 ORTHO05D009029 9.6e-87 325.5 584 61.8
HPP92_009152 Vanilla planifolia HOM05D007322 ORTHO05D009029 1.3e-86 325.1 634 55.0
ClCG10G013500 Citrullus lanatus HOM05D007322 ORTHO05D009029 8.1e-86 322.4 214 73.8
SGA_v2.0_scaffold110G31316 Striga asiatica HOM05D007322 ORTHO05D009029 3.4e-84 317.0 590 67.8
Ah.03g137110 Amaranthus hybridus HOM05D007322 ORTHO05D009029 4.5e-84 316.6 593 65.6
arahy.Tifrunner.gnm1.ann1.BYDN2S Arachis hypogaea HOM05D007322 ORTHO05D009029 1.7e-83 314.7 584 61.5
DCAR_025358 Daucus carota HOM05D007322 ORTHO05D009029 4.2e-82 310.1 217 68.7
VMungo0540G0689 Vigna mungo HOM05D007322 ORTHO05D009029 4.2e-82 310.1 560 66.6
MSTRG.20302 Avicennia marina HOM05D007322 ORTHO05D009029 3.0e-80 303.9 596 66.4
Eucgr.G00576 Eucalyptus grandis HOM05D007322 ORTHO05D009029 3.0e-80 303.9 217 69.6
Hund12986 Selenicereus undatus HOM05D007322 ORTHO05D009029 2.8e-78 297.4 567 41.8
FAN08G0261 Fragaria x ananassa HOM05D007322 ORTHO05D009029 6.2e-78 296.2 215 67.0
Peaxi162Scf00152g01437 Petunia axillaris HOM05D007322 ORTHO05D009029 1.1e-77 295.4 169 85.8
Zm00001eb162220 Zea mays HOM05D007322 ORTHO05D009029 6.9e-77 292.7 583 65.2
Os01g0559500 Oryza sativa ssp. japonica HOM05D007322 ORTHO05D009029 4.2e-74 283.5 575 64.3
Nitab4.5_0000001g0170 Nicotiana tabacum HOM05D007322 ORTHO05D009029 3.2e-66 257.3 201 83.6
ECA234G4037 Erigeron canadensis HOM05D007322 ORTHO05D009029 6.3e-62 243.0 539 65.7
Peaxi162Scf00152g01436 Petunia axillaris HOM05D007322 ORTHO05D009029 5.3e-61 240.0 279 63.1
Sc06g0002720 Simmondsia chinensis HOM05D007322 ORTHO05D009029 4.6e-57 226.9 489 69.5
FAN04G1727 Fragaria x ananassa HOM05D001260 ORTHO05D002424 1.9e-50 204.9 201 64.2
Nitab4.5_0003788g0010 Nicotiana tabacum HOM05D007322 ORTHO05D009029 3.9e-48 197.2 154 84.4
Oeu008898.1 Olea europaea HOM05D007322 ORTHO05D009029 5.7e-47 193.4 159 61.6
CDE05G1655 Ceratophyllum demersum HOM05D007322 ORTHO05D009029 1.2e-44 185.7 212 45.8
Cpa.g.sc113.59 Carica papaya HOM05D007322 ORTHO05D009029 1.7e-35 155.2 108 67.6
Haze_01695 Corylus avellana HOM05D004517 ORTHO05D005366 1.0e-32 146.0 124 62.9
DCAR_025359 Daucus carota HOM05D007322 ORTHO05D009029 1.3e-30 139.0 150 62.7
PGSC0003DMG400008423 Solanum tuberosum HOM05D007322 ORTHO05D009029 4.8e-30 137.1 77 88.3
Cpa.g.c42393 Carica papaya HOM05D007322 ORTHO05D009029 1.5e-18 99.0 97 51.5
Peaxi162Scf00427g00004 Petunia axillaris HOM05D007322 ORTHO05D009029 3.0e-16 91.3 45 91.1
Actinidia26149 Actinidia chinensis HOM05D007322 ORTHO05D009029 2.0e-15 88.6 97 69.1
Pp3c24_4430 Physcomitrium patens HOM05D007322 ORTHO05D009029 6.6e-11 73.6 113 31.9
Oeu027802.1 Olea europaea HOM05D007322 ORTHO05D009029 2.3e-08 65.1 80 45.0
SEGI_28259 Sequoiadendron giganteum HOM05D005775 ORTHO05D000023 3.4e-07 61.2 139 28.8
SEGI_07964 Sequoiadendron giganteum HOM05D006217 ORTHO05D008480 3.7e-06 57.8 132 24.2


User provided reference genes

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