Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p68380 Brassica napus HOM05D004199 ORTHO05D005905 0.0e+00 1594.3 900 100.0
BolC9t59585H Brassica oleracea HOM05D004199 ORTHO05D005905 0.0e+00 1582.8 902 99.4
A10p28170 Brassica napus HOM05D004199 ORTHO05D005905 0.0e+00 1535.4 900 95.3
BraA10t44866Z Brassica rapa HOM05D004199 ORTHO05D005905 0.0e+00 1535.4 900 95.3
BcaB08g37246 Brassica carinata HOM05D004199 ORTHO05D005905 0.0e+00 1407.5 916 87.9
BraA03t09739Z Brassica rapa HOM05D004199 ORTHO05D005905 0.0e+00 1280.4 909 83.2
A03p03960 Brassica napus HOM05D004199 ORTHO05D005905 0.0e+00 1272.7 907 79.4
Sp6g34340 Schrenkiella parvula HOM05D004199 ORTHO05D005905 0.0e+00 1270.8 918 82.0
C03p04430 Brassica napus HOM05D004199 ORTHO05D005905 0.0e+00 1252.3 909 81.7
BolC3t12974H Brassica oleracea HOM05D004199 ORTHO05D005905 0.0e+00 1231.9 909 80.7
AL6G19260 Arabidopsis lyrata HOM05D004199 ORTHO05D005905 0.0e+00 1183.3 923 77.2
Thhalv10012615m.g Eutrema salsugineum HOM05D004199 ORTHO05D005905 0.0e+00 1182.2 922 76.6
Carub.0006s0751 Capsella rubella HOM05D004199 ORTHO05D005905 0.0e+00 1181.8 924 77.1
BcaB01g05585 Brassica carinata HOM05D004199 ORTHO05D005905 0.0e+00 1178.7 915 74.8
Aa31LG3G17980 Aethionema arabicum HOM05D004199 ORTHO05D005905 0.0e+00 1170.2 862 75.1
CARHR204430 Cardamine hirsuta HOM05D004199 ORTHO05D005905 0.0e+00 1166.0 927 73.0
AT5G08550 Arabidopsis thaliana HOM05D004199 ORTHO05D005905 0.0e+00 1163.3 923 74.9
THA.LOC104800384 Tarenaya hassleriana HOM05D004199 ORTHO05D005905 4.1e-306 1054.7 923 65.9
Sed0023765 Sechium edule HOM05D004199 ORTHO05D005905 1.7e-232 810.1 949 50.9
Eucgr.K00868 Eucalyptus grandis HOM05D004199 ORTHO05D005905 3.0e-232 809.3 951 51.8
MELO3C012214.2 Cucumis melo HOM05D004199 ORTHO05D005905 2.8e-230 802.7 962 50.5
CsaV3_5G033970 Cucumis sativus L. HOM05D004199 ORTHO05D005905 1.8e-229 800.0 961 50.4
COL.COLO4_31201 Corchorus olitorius HOM05D004199 ORTHO05D005905 2.4e-229 799.7 940 51.8
Gorai.011G063300 Gossypium raimondii HOM05D004199 ORTHO05D005905 6.9e-229 798.1 943 51.7
Gohir.D10G059300 Gossypium hirsutum HOM05D004199 ORTHO05D005905 2.6e-228 796.2 943 51.6
Manes.04G160500 Manihot esculenta HOM05D004199 ORTHO05D005905 2.6e-228 796.2 885 53.0
Gohir.A10G057500 Gossypium hirsutum HOM05D004199 ORTHO05D005905 1.3e-227 793.9 938 51.7
Eucgr.G02350 Eucalyptus grandis HOM05D004199 ORTHO05D005905 9.3e-226 787.7 981 50.4
ClCG05G023030 Citrullus lanatus HOM05D004199 ORTHO05D005905 1.8e-221 773.5 942 50.5
CiPaw.16G003100 Carya illinoinensis HOM05D004199 ORTHO05D005905 2.4e-221 773.1 842 53.7
TWI53G1601 Tripterygium wilfordii HOM05D004199 ORTHO05D005905 9.0e-221 771.2 826 55.6
Cfa018630 Carpinus fangiana HOM05D004199 ORTHO05D005905 2.0e-220 770.0 955 50.3
CSS0043668 Camellia sinensis var. sinensis HOM05D004199 ORTHO05D005905 3.4e-220 769.2 911 50.7
CANSAT56G2350 Cannabis sativa HOM05D004199 ORTHO05D005905 4.9e-219 765.4 917 51.7
Lj6A766T32 Lonicera japonica HOM05D004199 ORTHO05D005905 8.4e-219 764.6 889 51.7
EL10Ac9g22638 Beta vulgaris HOM05D004199 ORTHO05D005905 1.6e-217 760.4 948 51.2
Ah.04g153070 Amaranthus hybridus HOM05D004199 ORTHO05D005905 3.5e-217 759.2 948 50.0
TAR623G0314 Trochodendron aralioides HOM05D004199 ORTHO05D005905 1.1e-215 754.2 843 53.4
MD13G1046700 Malus domestica HOM05D004199 ORTHO05D005905 5.7e-215 751.9 952 49.6
AUR62044199 Chenopodium quinoa HOM05D004199 ORTHO05D005905 8.2e-214 748.0 931 50.4
RcHm_v2.0_Chr4g0435851 Rosa chinensis HOM05D004199 ORTHO05D005905 1.1e-213 747.7 954 49.6
Ciclev10014191m.g Citrus clementina HOM05D004199 ORTHO05D005905 1.8e-213 746.9 875 51.7
Atru.chr6.1864_Atru.chr6.1865 Acer truncatum HOM05D004199 ORTHO05D005905 5.9e-212 741.9 838 52.3
FAN07G1167 Fragaria x ananassa HOM05D004199 ORTHO05D005905 2.2e-211 740.0 958 48.5
DCAR_030084 Daucus carota HOM05D004199 ORTHO05D005905 1.2e-209 734.2 881 50.1
Thecc.10G125100 Theobroma cacao HOM05D004199 ORTHO05D005905 1.6e-209 733.8 885 51.0
FAN22G1977 Fragaria x ananassa HOM05D004199 ORTHO05D005905 2.7e-209 733.0 949 48.8
Potri.008G002600 Populus trichocarpa HOM05D004199 ORTHO05D005905 2.7e-209 733.0 898 48.6
FvH4_4g28100 Fragaria vesca HOM05D004199 ORTHO05D005905 3.6e-209 732.6 954 48.1
FAN12G0509 Fragaria x ananassa HOM05D004199 ORTHO05D005905 4.6e-209 732.3 952 48.2
Sabra08G0000600 Salix brachista HOM05D004199 ORTHO05D005905 1.0e-208 731.1 929 48.4
MBI01_g12859_MAGBIO Magnolia biondii HOM05D004199 ORTHO05D005905 1.5e-207 727.2 868 50.5
FAN17G3109 Fragaria x ananassa HOM05D004199 ORTHO05D005905 1.3e-206 724.2 862 49.8
Nn6g35106 Nelumbo nucifera HOM05D004199 ORTHO05D005905 4.8e-206 722.2 850 51.8
vmacro14411 Vaccinium macrocarpon HOM05D004199 ORTHO05D005905 4.8e-206 722.2 957 46.9
MD16G1048400 Malus domestica HOM05D004199 ORTHO05D005905 1.4e-205 720.7 954 47.7
Hma1.2p1_0399F.1_g144220 Hydrangea macrophylla HOM05D004199 ORTHO05D005905 5.3e-205 718.8 840 49.9
Cc11_g10620 Coffea canephora HOM05D004199 ORTHO05D005905 1.7e-203 713.8 975 48.0
SGA_v2.0_scaffold14G06820 Striga asiatica HOM05D004199 ORTHO05D005905 1.6e-201 707.2 967 46.8
Psat2g189000 Pisum sativum HOM05D004199 ORTHO05D005905 2.1e-201 706.8 943 48.8
Dinv05796 Davidia involucrata HOM05D004199 ORTHO05D005905 3.6e-201 706.1 833 51.4
EL10Ac8g19592 Beta vulgaris HOM05D004199 ORTHO05D005905 1.4e-200 704.1 936 49.7
Haze_17439 Corylus avellana HOM05D004199 ORTHO05D005905 3.9e-200 702.6 956 48.3
Aqoxy2G01512 Aquilegia oxysepala HOM05D004199 ORTHO05D005905 8.8e-200 701.4 859 48.5
ATR0665G261 Amborella trichopoda HOM05D004199 ORTHO05D005905 1.5e-199 700.7 963 46.6
ECA234G0057 Erigeron canadensis HOM05D004199 ORTHO05D005905 2.2e-198 696.8 914 48.0
Hma1.2p1_2265F.1_g318400 Hydrangea macrophylla HOM05D004199 ORTHO05D005905 2.8e-198 696.4 841 49.3
Phvul.001G030200 Phaseolus vulgaris HOM05D004199 ORTHO05D005905 8.2e-198 694.9 921 47.9
VMungo1383G0908 Vigna mungo HOM05D004199 ORTHO05D005905 1.1e-197 694.5 929 47.5
Medtr5g007520 Medicago truncatula HOM05D004199 ORTHO05D005905 1.2e-196 691.0 942 47.9
CAN.G184.89 Capsicum annuum HOM05D004199 ORTHO05D005905 5.9e-196 688.7 895 47.4
Glyma.07G155300 Glycine max HOM05D004199 ORTHO05D005905 6.5e-195 685.3 931 47.7
Rhsim03G0238800 Rhododendron simsii HOM05D004199 ORTHO05D005905 1.1e-194 684.5 935 45.1
CDE05G0525 Ceratophyllum demersum HOM05D004199 ORTHO05D005905 4.2e-194 682.6 939 47.5
Peaxi162Scf00102g00927 Petunia axillaris HOM05D004199 ORTHO05D005905 1.6e-193 680.6 838 49.4
Glyma.07G227400 Glycine max HOM05D004199 ORTHO05D005905 5.2e-192 675.6 937 46.2
Sc17g0004690 Simmondsia chinensis HOM05D004199 ORTHO05D005905 2.6e-191 673.3 893 48.6
Ca_25946_v3 Cicer arietinum L. HOM05D004199 ORTHO05D005905 7.4e-191 671.8 943 46.4
Glyma.20G028100 Glycine max HOM05D004199 ORTHO05D005905 1.1e-189 667.9 908 47.8
CDE01G0057 Ceratophyllum demersum HOM05D004199 ORTHO05D005905 1.4e-189 667.5 898 48.9
Duzib235G0865 Durio zibethinus HOM05D004199 ORTHO05D005905 9.1e-189 664.8 871 47.4
Lj3g0002767 Lotus japonicus HOM05D004199 ORTHO05D005905 9.1e-189 664.8 947 45.4
PSO339G4136 Papaver somniferum HOM05D004199 ORTHO05D005905 9.1e-189 664.8 857 48.1
HanXRQChr17g0568011 Helianthus annuus HOM05D004199 ORTHO05D005905 5.0e-187 659.1 792 49.7
PSO801G0529 Papaver somniferum HOM05D004199 ORTHO05D005905 6.5e-187 658.7 939 45.4
Prupe.1G305200 Prunus persica HOM05D004199 ORTHO05D005905 8.5e-187 658.3 953 46.1
Lsat_1_v5_gn_4_1641 Lactuca sativa HOM05D004199 ORTHO05D005905 1.1e-186 657.9 897 46.2
Lalb_Chr10g0099721 Lupinus albus HOM05D004199 ORTHO05D005905 1.5e-186 657.5 859 47.4
Sopen05g005660 Solanum pennellii HOM05D004199 ORTHO05D005905 1.5e-186 657.5 902 45.3
Nitab4.5_0004122g0060 Nicotiana tabacum HOM05D004199 ORTHO05D005905 2.5e-186 656.8 990 43.7
HPP92_022758 Vanilla planifolia HOM05D004199 ORTHO05D005905 3.2e-186 656.4 933 45.0
PGSC0003DMG400000826 Solanum tuberosum HOM05D004199 ORTHO05D005905 3.6e-185 652.9 899 45.6
Lalb_Chr04g0254951 Lupinus albus HOM05D004199 ORTHO05D005905 4.0e-184 649.4 921 45.5
unitig_22.g6876 Utricularia gibba HOM05D004199 ORTHO05D005905 1.5e-183 647.5 982 44.9
Nitab4.5_0011513g0020 Nicotiana tabacum HOM05D004199 ORTHO05D005905 1.4e-181 641.0 969 43.6
TPR.G37944 Trifolium pratense HOM05D004199 ORTHO05D005905 7.0e-181 638.6 770 48.8
Hma1.2p1_0592F.1_g185323 Hydrangea macrophylla HOM05D004199 ORTHO05D005905 4.2e-178 629.4 776 48.6
SEGI_39962 Sequoiadendron giganteum HOM05D004199 ORTHO05D005905 1.8e-176 624.0 939 43.7
arahy.Tifrunner.gnm1.ann1.9AQU5H Arachis hypogaea HOM05D004199 ORTHO05D005905 8.8e-176 621.7 962 44.2
arahy.Tifrunner.gnm1.ann1.P5TZTU Arachis hypogaea HOM05D004199 ORTHO05D005905 5.9e-172 609.0 984 43.2
Migut.E00297 Erythranthe guttata HOM05D004199 ORTHO05D005905 3.8e-171 606.3 949 43.7
Aqoxy6G00799 Aquilegia oxysepala HOM05D004199 ORTHO05D005905 2.2e-166 590.5 794 44.2
Solyc05g009850.4 Solanum lycopersicum HOM05D004199 ORTHO05D005905 1.6e-161 574.3 570 52.6
Zm00001eb064800 Zea mays HOM05D004199 ORTHO05D005905 1.4e-160 571.2 986 41.5
Os03g0853700 Oryza sativa ssp. japonica HOM05D004199 ORTHO05D005905 1.8e-160 570.9 973 41.0
AagrBONN_evm.TU.Sc2ySwM_228.4147 Anthoceros agrestis HOM05D004199 ORTHO05D005905 2.4e-149 533.9 923 40.5
Actinidia38395 Actinidia chinensis HOM05D004199 ORTHO05D005905 1.5e-146 524.6 632 48.3
GSVIVG01011956001 Vitis vinifera HOM05D004199 ORTHO05D005905 2.0e-143 514.2 484 56.2
AagrBONN_evm.TU.Sc2ySwM_368.435 Anthoceros agrestis HOM05D004199 ORTHO05D005905 1.7e-142 511.1 923 39.9
AUR62042759 Chenopodium quinoa HOM05D004199 ORTHO05D005905 6.2e-137 492.7 480 55.0
Mapoly0131s0026 Marchantia polymorpha HOM05D004199 ORTHO05D005905 6.8e-136 489.2 1007 38.0
Pp3c5_20240 Physcomitrium patens HOM05D004199 ORTHO05D005905 6.0e-132 476.1 993 36.2
SMO259G0010 Selaginella moellendorffii HOM05D004199 ORTHO05D005905 3.0e-131 473.8 818 38.8
Oeu041359.1 Olea europaea HOM05D004199 ORTHO05D005905 3.6e-129 466.8 477 52.6
AT5G09210 Arabidopsis thaliana HOM05D004199 ORTHO05D005905 1.3e-107 395.2 300 69.3
Rhsim01G0212500 Rhododendron simsii HOM05D004199 ORTHO05D005905 3.1e-104 384.0 549 45.5
CARHR203800 Cardamine hirsuta HOM05D004199 ORTHO05D005905 1.7e-102 378.3 263 76.0
CBR_g46838 Chara braunii HOM05D004199 ORTHO05D005905 6.0e-100 369.8 571 41.0
Nitab4.5_0007631g0010 Nicotiana tabacum HOM05D004199 ORTHO05D005905 4.5e-79 300.4 482 39.6
Zm00001eb177730 Zea mays HOM05D004199 ORTHO05D005905 2.9e-70 271.2 392 44.6
Zm00001eb381810 Zea mays HOM05D004199 ORTHO05D005905 8.0e-68 263.1 379 44.6
Glyma.18G205900 Glycine max HOM05D004199 ORTHO05D005905 1.9e-61 241.9 301 46.5
Oeu041360.1 Olea europaea HOM05D004199 ORTHO05D005905 6.1e-60 236.9 483 41.4
QL01p046262 Quercus lobata HOM05D004199 ORTHO05D005905 8.0e-60 236.5 359 44.8
MCO14G506 Micromonas commoda HOM05D004199 ORTHO05D005905 1.8e-59 235.3 488 32.0
Zm00001eb323900 Zea mays HOM05D004199 ORTHO05D005905 8.8e-59 233.0 312 46.8
Cre06.g269350 Chlamydomonas reinhardtii HOM05D004199 ORTHO05D005905 9.8e-58 229.6 584 29.8
Actinidia13676 Actinidia chinensis HOM05D004199 ORTHO05D005905 1.2e-52 212.6 171 62.6
GSVIVG01011955001 Vitis vinifera HOM05D004199 ORTHO05D005905 1.6e-52 212.2 372 43.3
AUR62033048 Chenopodium quinoa HOM05D004199 ORTHO05D005905 5.7e-50 203.8 428 42.1
EL10Ac6g14565 Beta vulgaris HOM05D004199 ORTHO05D005905 7.5e-50 203.4 168 58.9
Cpa.g.sc221.8 Carica papaya HOM05D004199 ORTHO05D005905 5.9e-47 193.7 412 41.5
Actinidia13675 Actinidia chinensis HOM05D004199 ORTHO05D005905 2.8e-36 158.3 421 39.4
EL10Ac6g13882 Beta vulgaris HOM05D004199 ORTHO05D005905 3.0e-30 138.3 95 68.4
CARHR069330 Cardamine hirsuta HOM05D004199 ORTHO05D005905 3.9e-30 137.9 88 79.5
Thecc.06G064500 Theobroma cacao HOM05D004199 ORTHO05D005905 7.8e-23 113.6 82 68.3
AagrBONN_evm.TU.Sc2ySwM_368.450 Anthoceros agrestis HOM05D004199 ORTHO05D005905 4.9e-17 94.4 84 51.2
Nitab4.5_0000520g0050 Nicotiana tabacum HOM05D004199 ORTHO05D005905 2.1e-15 89.0 188 32.4
CARHR147400 Cardamine hirsuta HOM05D004199 ORTHO05D005905 2.3e-14 85.5 129 42.6
Potri.006G020200 Populus trichocarpa HOM05D004199 ORTHO05D005905 3.0e-14 85.1 102 49.0
Potri.006G020400 Populus trichocarpa HOM05D004199 ORTHO05D005905 1.9e-13 82.4 102 48.0
Cpa.g.sc221.6 Carica papaya HOM05D004199 ORTHO05D005905 4.3e-13 81.3 65 61.5
CARHR069340 Cardamine hirsuta HOM05D004199 ORTHO05D005905 3.1e-11 75.1 61 63.9
COL.COLO4_32069 Corchorus olitorius HOM05D004199 ORTHO05D025158 5.4e-08 64.3 90 43.3
COL.COLO4_28252 Corchorus olitorius HOM05D004199 ORTHO05D025158 3.5e-07 61.6 89 42.7
Aqoxy5G02943 Aquilegia oxysepala HOM05D004199 ORTHO05D077991 4.6e-07 61.2 40 62.5
AagrBONN_evm.TU.Sc2ySwM_368.453 Anthoceros agrestis HOM05D030179 ORTHO05D026588 1.3e-06 59.7 49 46.9


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