Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p11560 Brassica napus HOM05D001794 ORTHO05D015431 1.3e-34 149.1 70 100.0
BolC9t54047H Brassica oleracea HOM05D001794 ORTHO05D015431 1.3e-34 149.1 70 100.0
BcaC04g23158 Brassica carinata HOM05D001794 ORTHO05D004177 1.5e-30 135.6 70 94.3
BolC9t54051H Brassica oleracea HOM05D001794 ORTHO05D004177 1.5e-30 135.6 70 94.3
Sp2g29920 Schrenkiella parvula HOM05D001794 ORTHO05D004177 1.5e-30 135.6 70 94.3
AL8G44700 Arabidopsis lyrata HOM05D001794 ORTHO05D004177 3.3e-30 134.4 70 92.9
BcaB02g09993 Brassica carinata HOM05D001794 ORTHO05D004177 3.3e-30 134.4 70 92.9
BcaC03g18401 Brassica carinata HOM05D001794 ORTHO05D004177 3.3e-30 134.4 70 92.9
BcaC06g34742 Brassica carinata HOM05D001794 ORTHO05D004177 3.3e-30 134.4 70 92.9
BcaNung00465 Brassica carinata HOM05D001794 ORTHO05D004177 3.3e-30 134.4 70 92.9
A07p17170 Brassica napus HOM05D001794 ORTHO05D004177 3.3e-30 134.4 70 92.9
C02p64800 Brassica napus HOM05D001794 ORTHO05D004177 3.3e-30 134.4 70 92.9
C07p25030 Brassica napus HOM05D001794 ORTHO05D004177 3.3e-30 134.4 70 92.9
BolC2t12541H Brassica oleracea HOM05D001794 ORTHO05D004177 3.3e-30 134.4 70 92.9
BolC7t43035H Brassica oleracea HOM05D001794 ORTHO05D004177 3.3e-30 134.4 70 92.9
BraA07t29445Z Brassica rapa HOM05D001794 ORTHO05D004177 3.3e-30 134.4 70 92.9
Carub.0008s2775 Capsella rubella HOM05D001794 ORTHO05D004177 3.3e-30 134.4 70 92.9
CARHR280940 Cardamine hirsuta HOM05D001794 ORTHO05D004177 3.3e-30 134.4 70 92.9
Thhalv10003821m.g Eutrema salsugineum HOM05D001794 ORTHO05D004177 3.3e-30 134.4 70 92.9
AT5G66760 Arabidopsis thaliana HOM05D001794 ORTHO05D004177 7.4e-30 133.3 70 91.4
Aa31LG1G15320 Aethionema arabicum HOM05D001794 ORTHO05D004177 2.2e-29 131.7 70 91.4
C09p11450 Brassica napus HOM05D001794 ORTHO05D015431 6.9e-28 126.7 70 88.6
Peaxi162Scf00515g00518 Petunia axillaris HOM05D001794 ORTHO05D004177 1.2e-27 125.9 70 87.1
Solyc02g085350.4 Solanum lycopersicum HOM05D001794 ORTHO05D004177 2.0e-27 125.2 70 84.3
Sopen02g030040 Solanum pennellii HOM05D001794 ORTHO05D004177 2.0e-27 125.2 70 84.3
RcHm_v2.0_Chr2g0101771 Rosa chinensis HOM05D001794 ORTHO05D004177 2.6e-27 124.8 70 85.7
SalBow5G5094 Salvia bowleyana HOM05D001794 ORTHO05D004177 3.4e-27 124.4 70 85.7
HanXRQChr09g0261451 Helianthus annuus HOM05D001794 ORTHO05D004177 4.5e-27 124.0 70 84.3
Manes.01G134800 Manihot esculenta HOM05D001794 ORTHO05D004177 4.5e-27 124.0 70 85.7
QL06p045882 Quercus lobata HOM05D001794 ORTHO05D004177 4.5e-27 124.0 69 85.5
COL.COLO4_22089 Corchorus olitorius HOM05D001794 ORTHO05D004177 5.9e-27 123.6 70 85.7
Potri.007G026400 Populus trichocarpa HOM05D001794 ORTHO05D004177 5.9e-27 123.6 70 84.3
Sabra07G0023200 Salix brachista HOM05D001794 ORTHO05D004177 5.9e-27 123.6 70 84.3
PGSC0003DMG400014901 Solanum tuberosum HOM05D001794 ORTHO05D004177 5.9e-27 123.6 70 82.9
Aqoxy6G01095 Aquilegia oxysepala HOM05D001794 ORTHO05D004177 7.7e-27 123.2 70 84.3
DCAR_021442 Daucus carota HOM05D001794 ORTHO05D004177 7.7e-27 123.2 70 84.3
Actinidia35639 Actinidia chinensis HOM05D001794 ORTHO05D004177 1.0e-26 122.9 70 84.3
CSS0011689 Camellia sinensis var. sinensis HOM05D001794 ORTHO05D004177 1.0e-26 122.9 70 82.9
Ciclev10025149m.g Citrus clementina HOM05D001794 ORTHO05D004177 1.0e-26 122.9 70 84.3
Cc07_g09450 Coffea canephora HOM05D001794 ORTHO05D004177 1.0e-26 122.9 70 84.3
CsaV3_4G005080 Cucumis sativus L. HOM05D001794 ORTHO05D004177 1.0e-26 122.9 70 84.3
DCAR_017270 Daucus carota HOM05D001794 ORTHO05D004177 1.0e-26 122.9 70 84.3
Gorai.003G015500 Gossypium raimondii HOM05D001794 ORTHO05D004177 1.0e-26 122.9 70 84.3
THA.LOC104821278 Tarenaya hassleriana HOM05D001794 ORTHO05D004177 1.0e-26 122.9 70 84.3
Thecc.01G036800 Theobroma cacao HOM05D001794 ORTHO05D004177 1.0e-26 122.9 70 84.3
MELO3C017560.2 Cucumis melo HOM05D001794 ORTHO05D004177 1.3e-26 122.5 70 82.9
Duzib187G1849 Durio zibethinus HOM05D001794 ORTHO05D004177 1.3e-26 122.5 70 82.9
Duzib264G0324 Durio zibethinus HOM05D001794 ORTHO05D004177 1.3e-26 122.5 70 82.9
Migut.L00517 Erythranthe guttata HOM05D001794 ORTHO05D004177 1.3e-26 122.5 70 84.3
Gohir.D12G065000 Gossypium hirsutum HOM05D001794 ORTHO05D004177 1.3e-26 122.5 70 82.9
Gorai.008G068200 Gossypium raimondii HOM05D001794 ORTHO05D004177 1.3e-26 122.5 70 82.9
HanXRQChr16g0530311 Helianthus annuus HOM05D001794 ORTHO05D004177 1.3e-26 122.5 70 82.9
Lj4C200G5 Lonicera japonica HOM05D001794 ORTHO05D004177 1.3e-26 122.5 70 84.3
EL10Ac6g15572 Beta vulgaris HOM05D001794 ORTHO05D004177 1.7e-26 122.1 70 84.3
CSS0026761 Camellia sinensis var. sinensis HOM05D001794 ORTHO05D004177 1.7e-26 122.1 70 82.9
Duzib147G0476 Durio zibethinus HOM05D001794 ORTHO05D004177 1.7e-26 122.1 70 81.4
Lsat_1_v5_gn_4_150721 Lactuca sativa HOM05D001794 ORTHO05D004177 1.7e-26 122.1 70 81.4
Psat4g092360 Pisum sativum HOM05D001794 ORTHO05D004177 1.7e-26 122.1 70 82.9
Potri.005G123900 Populus trichocarpa HOM05D001794 ORTHO05D004177 1.7e-26 122.1 70 84.3
Prupe.7G153600 Prunus persica HOM05D001794 ORTHO05D004177 1.7e-26 122.1 70 82.9
arahy.Tifrunner.gnm1.ann1.4N0TPQ Arachis hypogaea HOM05D001794 ORTHO05D015431 2.2e-26 121.7 70 82.9
arahy.Tifrunner.gnm1.ann1.SUCZ0Z Arachis hypogaea HOM05D001794 ORTHO05D004177 2.2e-26 121.7 70 82.9
Cpa.g.sc6.105 Carica papaya HOM05D001794 ORTHO05D004177 2.2e-26 121.7 70 82.9
Eucgr.I02452 Eucalyptus grandis HOM05D001794 ORTHO05D004177 2.2e-26 121.7 70 82.9
Glyma.02G057400 Glycine max HOM05D001794 ORTHO05D004177 2.2e-26 121.7 70 81.4
BcaB04g20103 Brassica carinata HOM05D001794 ORTHO05D004177 2.9e-26 121.3 70 87.1
Ca_22263_v3 Cicer arietinum L. HOM05D001794 ORTHO05D004177 2.9e-26 121.3 70 81.4
Ca_22277_v3 Cicer arietinum L. HOM05D001794 ORTHO05D004177 2.9e-26 121.3 70 81.4
ECA232G2500 Erigeron canadensis HOM05D001794 ORTHO05D004177 2.9e-26 121.3 70 81.4
FAN26G1716 Fragaria x ananassa HOM05D001794 ORTHO05D004177 2.9e-26 121.3 70 82.9
FAN26G2941 Fragaria x ananassa HOM05D001794 ORTHO05D004177 2.9e-26 121.3 70 82.9
Nn5g29584 Nelumbo nucifera HOM05D001794 ORTHO05D004177 2.9e-26 121.3 70 81.4
Oeu042258.3 Olea europaea HOM05D001794 ORTHO05D004177 2.9e-26 121.3 70 82.9
Sc03g0002930 Simmondsia chinensis HOM05D001794 ORTHO05D004177 2.9e-26 121.3 70 82.9
SGA_v2.0_scaffold3G01839 Striga asiatica HOM05D001794 ORTHO05D004177 2.9e-26 121.3 70 81.4
Gohir.A12G064900 Gossypium hirsutum HOM05D001794 ORTHO05D004177 3.8e-26 120.9 70 81.4
Hma1.2p1_0717F.1_g208120 Hydrangea macrophylla HOM05D001794 ORTHO05D004177 3.8e-26 120.9 70 82.9
MD02G1148900 Malus domestica HOM05D001794 ORTHO05D004177 3.8e-26 120.9 70 82.9
MD15G1263800 Malus domestica HOM05D001794 ORTHO05D004177 3.8e-26 120.9 70 82.9
PGR119G0879 Punica granatum HOM05D001794 ORTHO05D004177 3.8e-26 120.9 70 81.4
Hund16428 Selenicereus undatus HOM05D001794 ORTHO05D004177 3.8e-26 120.9 70 81.4
TPR.G34987 Trifolium pratense HOM05D001794 ORTHO05D004177 3.8e-26 120.9 70 81.4
BcaC01g02866 Brassica carinata HOM05D001794 ORTHO05D004177 5.0e-26 120.6 70 81.4
A06p33210 Brassica napus HOM05D001794 ORTHO05D004177 5.0e-26 120.6 70 81.4
C03p59240 Brassica napus HOM05D001794 ORTHO05D004177 5.0e-26 120.6 70 81.4
BolC3t18181H Brassica oleracea HOM05D001794 ORTHO05D004177 5.0e-26 120.6 70 81.4
BraA06t26252Z Brassica rapa HOM05D001794 ORTHO05D004177 5.0e-26 120.6 70 81.4
CDE06G0698 Ceratophyllum demersum HOM05D001794 ORTHO05D004177 5.0e-26 120.6 70 81.4
AUR62000825 Chenopodium quinoa HOM05D001794 ORTHO05D004177 5.0e-26 120.6 70 82.9
AUR62005148 Chenopodium quinoa HOM05D001794 ORTHO05D004177 5.0e-26 120.6 70 82.9
Haze_15100 Corylus avellana HOM05D001794 ORTHO05D004177 5.0e-26 120.6 70 81.4
VMungo0251G2041 Vigna mungo HOM05D001794 ORTHO05D004177 5.0e-26 120.6 70 81.4
Ah.02g125220 Amaranthus hybridus HOM05D001794 ORTHO05D004177 6.5e-26 120.2 70 81.4
CANSAT01G3171 Cannabis sativa HOM05D001794 ORTHO05D004177 6.5e-26 120.2 70 81.4
AUR62007559 Chenopodium quinoa HOM05D001794 ORTHO05D004177 6.5e-26 120.2 70 81.4
Manes.02G093200 Manihot esculenta HOM05D001794 ORTHO05D004177 6.5e-26 120.2 70 82.9
PSO675G3341 Papaver somniferum HOM05D001794 ORTHO05D004177 6.5e-26 120.2 70 80.0
TPR.G22290 Trifolium pratense HOM05D001794 ORTHO05D004177 6.5e-26 120.2 70 80.0
unitig_748.g8759 Utricularia gibba HOM05D001794 ORTHO05D004177 6.5e-26 120.2 68 83.8
Ca_24842_v3 Cicer arietinum L. HOM05D001794 ORTHO05D004177 8.5e-26 119.8 70 80.0
FvH4_1g13410 Fragaria vesca HOM05D001794 ORTHO05D004177 8.5e-26 119.8 70 81.4
FAN19G0995 Fragaria x ananassa HOM05D001794 ORTHO05D004177 8.5e-26 119.8 70 81.4
FAN23G1783 Fragaria x ananassa HOM05D001794 ORTHO05D004177 8.5e-26 119.8 70 81.4
FAN28G0311 Fragaria x ananassa HOM05D001794 ORTHO05D004177 8.5e-26 119.8 70 81.4
Pp3c27_4920 Physcomitrium patens HOM05D001794 ORTHO05D004177 8.5e-26 119.8 70 80.0
Sabra05G0101500 Salix brachista HOM05D001794 ORTHO05D004177 8.5e-26 119.8 70 81.4
THA.LOC104819221 Tarenaya hassleriana HOM05D001794 ORTHO05D004177 8.5e-26 119.8 70 81.4
CDE04G1961 Ceratophyllum demersum HOM05D001794 ORTHO05D004177 1.1e-25 119.4 70 80.0
ClCG07G009160 Citrullus lanatus HOM05D001794 ORTHO05D004177 1.1e-25 119.4 70 80.0
Sed0002777 Sechium edule HOM05D001794 ORTHO05D004177 1.1e-25 119.4 70 81.4
BcaB08g34836 Brassica carinata HOM05D001794 ORTHO05D004177 1.4e-25 119.0 70 81.4
Cfa004301 Carpinus fangiana HOM05D001794 ORTHO05D004177 1.4e-25 119.0 70 80.0
CiPaw.01G037100 Carya illinoinensis HOM05D001794 ORTHO05D004177 1.4e-25 119.0 70 81.4
Gohir.D03G015200 Gossypium hirsutum HOM05D001794 ORTHO05D004177 1.4e-25 119.0 70 82.9
Dinv39978 Davidia involucrata HOM05D001794 ORTHO05D004177 1.9e-25 118.6 70 80.0
Sp3g31870 Schrenkiella parvula HOM05D001794 ORTHO05D004177 1.9e-25 118.6 70 80.0
Atru.chr3.565 Acer truncatum HOM05D001794 ORTHO05D004177 2.5e-25 118.2 70 80.0
AUR62004044 Chenopodium quinoa HOM05D001794 ORTHO05D004177 2.5e-25 118.2 70 80.0
Thhalv10022591m.g Eutrema salsugineum HOM05D001794 ORTHO05D004177 2.5e-25 118.2 70 78.6
Hma1.2p1_0400F.1_g144450 Hydrangea macrophylla HOM05D001794 ORTHO05D004177 2.5e-25 118.2 70 81.4
Os07g0134800 Oryza sativa ssp. japonica HOM05D001794 ORTHO05D004177 2.5e-25 118.2 70 80.0
vmacro17842 Vaccinium macrocarpon HOM05D001794 ORTHO05D004177 2.5e-25 118.2 70 81.4
Medtr5g020050 Medicago truncatula HOM05D001794 ORTHO05D004177 3.2e-25 117.9 70 78.6
Nn1g05014 Nelumbo nucifera HOM05D001794 ORTHO05D004177 3.2e-25 117.9 70 80.0
PSO541G4495 Papaver somniferum HOM05D001794 ORTHO05D004177 3.2e-25 117.9 70 78.6
Psat2g160000 Pisum sativum HOM05D001794 ORTHO05D004177 3.2e-25 117.9 70 78.6
TWI09G0850 Tripterygium wilfordii HOM05D001794 ORTHO05D004177 3.2e-25 117.9 70 81.4
TAR381G1199 Trochodendron aralioides HOM05D001794 ORTHO05D004177 3.2e-25 117.9 70 78.6
GSVIVG01018976001 Vitis vinifera HOM05D001794 ORTHO05D004177 3.2e-25 117.9 70 81.4
AL3G51730 Arabidopsis lyrata HOM05D001794 ORTHO05D004177 4.2e-25 117.5 70 78.6
Mapoly0002s0067 Marchantia polymorpha HOM05D001794 ORTHO05D004177 5.5e-25 117.1 70 80.0
HPP92_017748 Vanilla planifolia HOM05D001794 ORTHO05D004177 5.5e-25 117.1 70 80.0
AT2G18450 Arabidopsis thaliana HOM05D001794 ORTHO05D004177 7.2e-25 116.7 70 78.6
CARHR109040 Cardamine hirsuta HOM05D001794 ORTHO05D004177 7.2e-25 116.7 70 78.6
Lalb_Chr09g0322451 Lupinus albus HOM05D001794 ORTHO05D004177 9.4e-25 116.3 70 78.6
Zm00001eb299550 Zea mays HOM05D001794 ORTHO05D004177 1.6e-24 115.5 70 78.6
Lalb_Chr16g0377871 Lupinus albus HOM05D001794 ORTHO05D004177 2.7e-24 114.8 70 77.1
Zm00001eb117970 Zea mays HOM05D001794 ORTHO05D004177 2.7e-24 114.8 70 78.6
PSO541G3878 Papaver somniferum HOM05D001794 ORTHO05D004177 4.7e-24 114.0 70 77.1
PSO675G6080 Papaver somniferum HOM05D001794 ORTHO05D004177 4.7e-24 114.0 70 77.1
Aa31LG8G15600 Aethionema arabicum HOM05D001794 ORTHO05D004177 6.1e-24 113.6 71 78.9
Pp3c6_24710 Physcomitrium patens HOM05D001794 ORTHO05D004177 6.1e-24 113.6 70 74.3
Phvul.002G029800 Phaseolus vulgaris HOM05D001794 ORTHO05D004177 7.9e-24 113.2 70 75.7
VMungo1215G0549 Vigna mungo HOM05D001794 ORTHO05D004177 1.0e-23 112.8 70 75.7
Glyma.01G175600 Glycine max HOM05D001794 ORTHO05D004177 1.4e-23 112.5 70 74.3
Glyma.11G067800 Glycine max HOM05D001794 ORTHO05D004177 1.4e-23 112.5 70 74.3
Oeu056760.1 Olea europaea HOM05D001794 ORTHO05D004177 1.4e-23 112.5 70 81.4
SMO116G0376 Selaginella moellendorffii HOM05D001794 ORTHO05D004177 2.3e-23 111.7 70 77.1
TAR376G0804 Trochodendron aralioides HOM05D001794 ORTHO05D004177 1.1e-22 109.4 66 78.8
AagrBONN_evm.TU.Sc2ySwM_368.2634 Anthoceros agrestis HOM05D001794 ORTHO05D004177 1.5e-22 109.0 70 75.7
Hund28964 Selenicereus undatus HOM05D001794 ORTHO05D004177 1.5e-22 109.0 70 72.9
Hund28966 Selenicereus undatus HOM05D001794 ORTHO05D004177 1.5e-22 109.0 70 72.9
ATR0733G007 Amborella trichopoda HOM05D001794 ORTHO05D004177 4.4e-22 107.5 70 75.7
Lj4g0016367 Lotus japonicus HOM05D001794 ORTHO05D004177 7.4e-22 106.7 70 74.3
CBR_g31678 Chara braunii HOM05D001794 ORTHO05D004177 9.7e-22 106.3 70 71.4
Nitab4.5_0000434g0160 Nicotiana tabacum HOM05D001794 ORTHO05D004177 4.1e-20 100.9 70 75.7
Phvul.003G253200 Phaseolus vulgaris HOM05D001794 ORTHO05D004177 2.0e-19 98.6 58 81.0
Nitab4.5_0003835g0030 Nicotiana tabacum HOM05D001794 ORTHO05D004177 2.7e-16 88.2 50 80.0
Cre14.g619133 Chlamydomonas reinhardtii HOM05D001794 ORTHO05D004177 1.4e-15 85.9 72 61.1
MCO12G459 Micromonas commoda HOM05D001794 ORTHO05D004177 3.0e-15 84.7 70 64.3
Glyma.01G100600 Glycine max HOM05D001794 ORTHO05D015431 3.9e-15 84.3 50 74.0
PRCOL_00005432 Prasinoderma coloniale HOM05D001794 ORTHO05D004177 9.7e-14 79.7 70 60.0
Actinidia19181 Actinidia chinensis HOM05D001794 ORTHO05D055678 6.3e-13 77.0 42 83.3
SEGI_03017 Sequoiadendron giganteum HOM05D001794 ORTHO05D015431 2.9e-10 68.2 33 93.9
SEGI_36122 Sequoiadendron giganteum HOM05D001794 ORTHO05D015431 1.2e-08 62.8 47 66.0
Lj4g0012722 Lotus japonicus HOM05D001794 ORTHO05D015431 1.6e-08 62.4 37 75.7
Cfa024194 Carpinus fangiana HOM05D001794 ORTHO05D004177 2.1e-08 62.0 68 51.5
CiPaw.02G016800 Carya illinoinensis HOM05D001794 ORTHO05D004177 3.6e-08 61.2 34 82.4
SEGI_17535 Sequoiadendron giganteum HOM05D001794 ORTHO05D015431 3.0e-07 58.2 37 73.0
Lalb_Chr05g0212821 Lupinus albus HOM05D001794 ORTHO05D015431 6.7e-07 57.0 33 78.8


User provided reference genes

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