Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p11450 Brassica napus HOM05D001794 ORTHO05D015431 5.2e-33 143.7 67 100.0
AL8G44700 Arabidopsis lyrata HOM05D001794 ORTHO05D004177 1.4e-30 135.6 67 95.5
BcaB02g09993 Brassica carinata HOM05D001794 ORTHO05D004177 1.4e-30 135.6 67 95.5
BcaC03g18401 Brassica carinata HOM05D001794 ORTHO05D004177 1.4e-30 135.6 67 95.5
BcaC06g34742 Brassica carinata HOM05D001794 ORTHO05D004177 1.4e-30 135.6 67 95.5
BcaNung00465 Brassica carinata HOM05D001794 ORTHO05D004177 1.4e-30 135.6 67 95.5
A07p17170 Brassica napus HOM05D001794 ORTHO05D004177 1.4e-30 135.6 67 95.5
C02p64800 Brassica napus HOM05D001794 ORTHO05D004177 1.4e-30 135.6 67 95.5
C07p25030 Brassica napus HOM05D001794 ORTHO05D004177 1.4e-30 135.6 67 95.5
BolC2t12541H Brassica oleracea HOM05D001794 ORTHO05D004177 1.4e-30 135.6 67 95.5
BolC7t43035H Brassica oleracea HOM05D001794 ORTHO05D004177 1.4e-30 135.6 67 95.5
BraA07t29445Z Brassica rapa HOM05D001794 ORTHO05D004177 1.4e-30 135.6 67 95.5
Carub.0008s2775 Capsella rubella HOM05D001794 ORTHO05D004177 1.4e-30 135.6 67 95.5
AT5G66760 Arabidopsis thaliana HOM05D001794 ORTHO05D004177 3.2e-30 134.4 67 94.0
BcaC04g23158 Brassica carinata HOM05D001794 ORTHO05D004177 4.2e-30 134.0 67 94.0
BolC9t54051H Brassica oleracea HOM05D001794 ORTHO05D004177 4.2e-30 134.0 67 94.0
Sp2g29920 Schrenkiella parvula HOM05D001794 ORTHO05D004177 4.2e-30 134.0 67 94.0
CARHR280940 Cardamine hirsuta HOM05D001794 ORTHO05D004177 9.3e-30 132.9 67 92.5
Thhalv10003821m.g Eutrema salsugineum HOM05D001794 ORTHO05D004177 9.3e-30 132.9 67 92.5
Aa31LG1G15320 Aethionema arabicum HOM05D001794 ORTHO05D004177 6.0e-29 130.2 67 91.0
C09p11560 Brassica napus HOM05D001794 ORTHO05D015431 3.9e-28 127.5 70 88.6
BolC9t54047H Brassica oleracea HOM05D001794 ORTHO05D015431 3.9e-28 127.5 70 88.6
Peaxi162Scf00515g00518 Petunia axillaris HOM05D001794 ORTHO05D004177 3.3e-27 124.4 67 86.6
Solyc02g085350.4 Solanum lycopersicum HOM05D001794 ORTHO05D004177 5.6e-27 123.6 67 83.6
Sopen02g030040 Solanum pennellii HOM05D001794 ORTHO05D004177 5.6e-27 123.6 67 83.6
RcHm_v2.0_Chr2g0101771 Rosa chinensis HOM05D001794 ORTHO05D004177 7.3e-27 123.2 67 85.1
SalBow5G5094 Salvia bowleyana HOM05D001794 ORTHO05D004177 7.3e-27 123.2 67 85.1
FAN26G1716 Fragaria x ananassa HOM05D001794 ORTHO05D004177 1.3e-26 122.5 67 85.1
FAN26G2941 Fragaria x ananassa HOM05D001794 ORTHO05D004177 1.3e-26 122.5 67 85.1
HanXRQChr09g0261451 Helianthus annuus HOM05D001794 ORTHO05D004177 1.3e-26 122.5 67 83.6
Manes.01G134800 Manihot esculenta HOM05D001794 ORTHO05D004177 1.3e-26 122.5 67 85.1
QL06p045882 Quercus lobata HOM05D001794 ORTHO05D004177 1.3e-26 122.5 66 84.8
COL.COLO4_22089 Corchorus olitorius HOM05D001794 ORTHO05D004177 1.6e-26 122.1 67 85.1
Potri.007G026400 Populus trichocarpa HOM05D001794 ORTHO05D004177 1.6e-26 122.1 67 83.6
Sabra07G0023200 Salix brachista HOM05D001794 ORTHO05D004177 1.6e-26 122.1 67 83.6
PGSC0003DMG400014901 Solanum tuberosum HOM05D001794 ORTHO05D004177 1.6e-26 122.1 67 82.1
Aqoxy6G01095 Aquilegia oxysepala HOM05D001794 ORTHO05D004177 2.1e-26 121.7 67 83.6
BcaB04g20103 Brassica carinata HOM05D001794 ORTHO05D004177 2.1e-26 121.7 67 88.1
BcaC01g02866 Brassica carinata HOM05D001794 ORTHO05D004177 2.1e-26 121.7 67 83.6
A06p33210 Brassica napus HOM05D001794 ORTHO05D004177 2.1e-26 121.7 67 83.6
C03p59240 Brassica napus HOM05D001794 ORTHO05D004177 2.1e-26 121.7 67 83.6
BolC3t18181H Brassica oleracea HOM05D001794 ORTHO05D004177 2.1e-26 121.7 67 83.6
BraA06t26252Z Brassica rapa HOM05D001794 ORTHO05D004177 2.1e-26 121.7 67 83.6
DCAR_021442 Daucus carota HOM05D001794 ORTHO05D004177 2.1e-26 121.7 67 83.6
Actinidia35639 Actinidia chinensis HOM05D001794 ORTHO05D004177 2.8e-26 121.3 67 83.6
CSS0011689 Camellia sinensis var. sinensis HOM05D001794 ORTHO05D004177 2.8e-26 121.3 67 82.1
Ciclev10025149m.g Citrus clementina HOM05D001794 ORTHO05D004177 2.8e-26 121.3 67 83.6
Cc07_g09450 Coffea canephora HOM05D001794 ORTHO05D004177 2.8e-26 121.3 67 83.6
CsaV3_4G005080 Cucumis sativus L. HOM05D001794 ORTHO05D004177 2.8e-26 121.3 67 83.6
DCAR_017270 Daucus carota HOM05D001794 ORTHO05D004177 2.8e-26 121.3 67 83.6
Gorai.003G015500 Gossypium raimondii HOM05D001794 ORTHO05D004177 2.8e-26 121.3 67 83.6
THA.LOC104821278 Tarenaya hassleriana HOM05D001794 ORTHO05D004177 2.8e-26 121.3 67 83.6
Thecc.01G036800 Theobroma cacao HOM05D001794 ORTHO05D004177 2.8e-26 121.3 67 83.6
MELO3C017560.2 Cucumis melo HOM05D001794 ORTHO05D004177 3.6e-26 120.9 67 82.1
Duzib187G1849 Durio zibethinus HOM05D001794 ORTHO05D004177 3.6e-26 120.9 67 82.1
Duzib264G0324 Durio zibethinus HOM05D001794 ORTHO05D004177 3.6e-26 120.9 67 82.1
Migut.L00517 Erythranthe guttata HOM05D001794 ORTHO05D004177 3.6e-26 120.9 67 83.6
FvH4_1g13410 Fragaria vesca HOM05D001794 ORTHO05D004177 3.6e-26 120.9 67 83.6
FAN19G0995 Fragaria x ananassa HOM05D001794 ORTHO05D004177 3.6e-26 120.9 67 83.6
FAN23G1783 Fragaria x ananassa HOM05D001794 ORTHO05D004177 3.6e-26 120.9 67 83.6
FAN28G0311 Fragaria x ananassa HOM05D001794 ORTHO05D004177 3.6e-26 120.9 67 83.6
Gohir.D12G065000 Gossypium hirsutum HOM05D001794 ORTHO05D004177 3.6e-26 120.9 67 82.1
Gorai.008G068200 Gossypium raimondii HOM05D001794 ORTHO05D004177 3.6e-26 120.9 67 82.1
HanXRQChr16g0530311 Helianthus annuus HOM05D001794 ORTHO05D004177 3.6e-26 120.9 67 82.1
Lsat_1_v5_gn_4_150721 Lactuca sativa HOM05D001794 ORTHO05D004177 3.6e-26 120.9 67 82.1
Lj4C200G5 Lonicera japonica HOM05D001794 ORTHO05D004177 3.6e-26 120.9 67 83.6
EL10Ac6g15572 Beta vulgaris HOM05D001794 ORTHO05D004177 4.8e-26 120.6 67 83.6
CSS0026761 Camellia sinensis var. sinensis HOM05D001794 ORTHO05D004177 4.8e-26 120.6 67 82.1
Duzib147G0476 Durio zibethinus HOM05D001794 ORTHO05D004177 4.8e-26 120.6 67 80.6
Psat4g092360 Pisum sativum HOM05D001794 ORTHO05D004177 4.8e-26 120.6 67 82.1
Potri.005G123900 Populus trichocarpa HOM05D001794 ORTHO05D004177 4.8e-26 120.6 67 83.6
Prupe.7G153600 Prunus persica HOM05D001794 ORTHO05D004177 4.8e-26 120.6 67 82.1
arahy.Tifrunner.gnm1.ann1.4N0TPQ Arachis hypogaea HOM05D001794 ORTHO05D015431 6.2e-26 120.2 67 82.1
arahy.Tifrunner.gnm1.ann1.SUCZ0Z Arachis hypogaea HOM05D001794 ORTHO05D004177 6.2e-26 120.2 67 82.1
BcaB08g34836 Brassica carinata HOM05D001794 ORTHO05D004177 6.2e-26 120.2 67 83.6
Cpa.g.sc6.105 Carica papaya HOM05D001794 ORTHO05D004177 6.2e-26 120.2 67 82.1
Eucgr.I02452 Eucalyptus grandis HOM05D001794 ORTHO05D004177 6.2e-26 120.2 67 82.1
Glyma.02G057400 Glycine max HOM05D001794 ORTHO05D004177 6.2e-26 120.2 67 80.6
Ca_22263_v3 Cicer arietinum L. HOM05D001794 ORTHO05D004177 8.1e-26 119.8 67 80.6
Ca_22277_v3 Cicer arietinum L. HOM05D001794 ORTHO05D004177 8.1e-26 119.8 67 80.6
ECA232G2500 Erigeron canadensis HOM05D001794 ORTHO05D004177 8.1e-26 119.8 67 80.6
Nn5g29584 Nelumbo nucifera HOM05D001794 ORTHO05D004177 8.1e-26 119.8 67 80.6
Oeu042258.3 Olea europaea HOM05D001794 ORTHO05D004177 8.1e-26 119.8 67 82.1
Sp3g31870 Schrenkiella parvula HOM05D001794 ORTHO05D004177 8.1e-26 119.8 67 82.1
Sc03g0002930 Simmondsia chinensis HOM05D001794 ORTHO05D004177 8.1e-26 119.8 67 82.1
SGA_v2.0_scaffold3G01839 Striga asiatica HOM05D001794 ORTHO05D004177 8.1e-26 119.8 67 80.6
Thhalv10022591m.g Eutrema salsugineum HOM05D001794 ORTHO05D004177 1.1e-25 119.4 67 80.6
Gohir.A12G064900 Gossypium hirsutum HOM05D001794 ORTHO05D004177 1.1e-25 119.4 67 80.6
Hma1.2p1_0717F.1_g208120 Hydrangea macrophylla HOM05D001794 ORTHO05D004177 1.1e-25 119.4 67 82.1
MD02G1148900 Malus domestica HOM05D001794 ORTHO05D004177 1.1e-25 119.4 67 82.1
MD15G1263800 Malus domestica HOM05D001794 ORTHO05D004177 1.1e-25 119.4 67 82.1
PGR119G0879 Punica granatum HOM05D001794 ORTHO05D004177 1.1e-25 119.4 67 80.6
Hund16428 Selenicereus undatus HOM05D001794 ORTHO05D004177 1.1e-25 119.4 67 80.6
TPR.G34987 Trifolium pratense HOM05D001794 ORTHO05D004177 1.1e-25 119.4 67 80.6
CDE06G0698 Ceratophyllum demersum HOM05D001794 ORTHO05D004177 1.4e-25 119.0 67 80.6
AUR62000825 Chenopodium quinoa HOM05D001794 ORTHO05D004177 1.4e-25 119.0 67 82.1
AUR62005148 Chenopodium quinoa HOM05D001794 ORTHO05D004177 1.4e-25 119.0 67 82.1
Haze_15100 Corylus avellana HOM05D001794 ORTHO05D004177 1.4e-25 119.0 67 80.6
VMungo0251G2041 Vigna mungo HOM05D001794 ORTHO05D004177 1.4e-25 119.0 67 80.6
Ah.02g125220 Amaranthus hybridus HOM05D001794 ORTHO05D004177 1.8e-25 118.6 67 80.6
AL3G51730 Arabidopsis lyrata HOM05D001794 ORTHO05D004177 1.8e-25 118.6 67 80.6
CANSAT01G3171 Cannabis sativa HOM05D001794 ORTHO05D004177 1.8e-25 118.6 67 80.6
AUR62007559 Chenopodium quinoa HOM05D001794 ORTHO05D004177 1.8e-25 118.6 67 80.6
Manes.02G093200 Manihot esculenta HOM05D001794 ORTHO05D004177 1.8e-25 118.6 67 82.1
PSO675G3341 Papaver somniferum HOM05D001794 ORTHO05D004177 1.8e-25 118.6 67 79.1
TPR.G22290 Trifolium pratense HOM05D001794 ORTHO05D004177 1.8e-25 118.6 67 79.1
unitig_748.g8759 Utricularia gibba HOM05D001794 ORTHO05D004177 1.8e-25 118.6 65 83.1
Ca_24842_v3 Cicer arietinum L. HOM05D001794 ORTHO05D004177 2.4e-25 118.2 67 79.1
Pp3c27_4920 Physcomitrium patens HOM05D001794 ORTHO05D004177 2.4e-25 118.2 67 79.1
Sabra05G0101500 Salix brachista HOM05D001794 ORTHO05D004177 2.4e-25 118.2 67 80.6
THA.LOC104819221 Tarenaya hassleriana HOM05D001794 ORTHO05D004177 2.4e-25 118.2 67 80.6
AT2G18450 Arabidopsis thaliana HOM05D001794 ORTHO05D004177 3.1e-25 117.9 67 80.6
CARHR109040 Cardamine hirsuta HOM05D001794 ORTHO05D004177 3.1e-25 117.9 67 80.6
CDE04G1961 Ceratophyllum demersum HOM05D001794 ORTHO05D004177 3.1e-25 117.9 67 79.1
ClCG07G009160 Citrullus lanatus HOM05D001794 ORTHO05D004177 3.1e-25 117.9 67 79.1
Sed0002777 Sechium edule HOM05D001794 ORTHO05D004177 3.1e-25 117.9 67 80.6
Cfa004301 Carpinus fangiana HOM05D001794 ORTHO05D004177 4.0e-25 117.5 67 79.1
CiPaw.01G037100 Carya illinoinensis HOM05D001794 ORTHO05D004177 4.0e-25 117.5 67 80.6
Gohir.D03G015200 Gossypium hirsutum HOM05D001794 ORTHO05D004177 4.0e-25 117.5 67 82.1
Dinv39978 Davidia involucrata HOM05D001794 ORTHO05D004177 5.3e-25 117.1 67 79.1
Atru.chr3.565 Acer truncatum HOM05D001794 ORTHO05D004177 6.9e-25 116.7 67 79.1
AUR62004044 Chenopodium quinoa HOM05D001794 ORTHO05D004177 6.9e-25 116.7 67 79.1
Hma1.2p1_0400F.1_g144450 Hydrangea macrophylla HOM05D001794 ORTHO05D004177 6.9e-25 116.7 67 80.6
Os07g0134800 Oryza sativa ssp. japonica HOM05D001794 ORTHO05D004177 6.9e-25 116.7 67 79.1
vmacro17842 Vaccinium macrocarpon HOM05D001794 ORTHO05D004177 6.9e-25 116.7 67 80.6
Medtr5g020050 Medicago truncatula HOM05D001794 ORTHO05D004177 9.0e-25 116.3 67 77.6
Nn1g05014 Nelumbo nucifera HOM05D001794 ORTHO05D004177 9.0e-25 116.3 67 79.1
PSO541G4495 Papaver somniferum HOM05D001794 ORTHO05D004177 9.0e-25 116.3 67 77.6
Psat2g160000 Pisum sativum HOM05D001794 ORTHO05D004177 9.0e-25 116.3 67 77.6
TWI09G0850 Tripterygium wilfordii HOM05D001794 ORTHO05D004177 9.0e-25 116.3 67 80.6
TAR381G1199 Trochodendron aralioides HOM05D001794 ORTHO05D004177 9.0e-25 116.3 67 77.6
Mapoly0002s0067 Marchantia polymorpha HOM05D001794 ORTHO05D004177 1.5e-24 115.5 67 79.1
HPP92_017748 Vanilla planifolia HOM05D001794 ORTHO05D004177 1.5e-24 115.5 67 79.1
PSO541G3878 Papaver somniferum HOM05D001794 ORTHO05D004177 2.0e-24 115.2 67 79.1
PSO675G6080 Papaver somniferum HOM05D001794 ORTHO05D004177 2.0e-24 115.2 67 79.1
Lalb_Chr09g0322451 Lupinus albus HOM05D001794 ORTHO05D004177 2.6e-24 114.8 67 77.6
GSVIVG01018976001 Vitis vinifera HOM05D001794 ORTHO05D004177 4.5e-24 114.0 67 77.6
Zm00001eb299550 Zea mays HOM05D001794 ORTHO05D004177 4.5e-24 114.0 67 77.6
Lalb_Chr16g0377871 Lupinus albus HOM05D001794 ORTHO05D004177 7.6e-24 113.2 67 76.1
Zm00001eb117970 Zea mays HOM05D001794 ORTHO05D004177 7.6e-24 113.2 67 77.6
Aa31LG8G15600 Aethionema arabicum HOM05D001794 ORTHO05D004177 9.9e-24 112.8 68 79.4
Oeu056760.1 Olea europaea HOM05D001794 ORTHO05D004177 1.3e-23 112.5 67 80.6
Pp3c6_24710 Physcomitrium patens HOM05D001794 ORTHO05D004177 1.7e-23 112.1 67 73.1
Phvul.002G029800 Phaseolus vulgaris HOM05D001794 ORTHO05D004177 2.2e-23 111.7 67 74.6
VMungo1215G0549 Vigna mungo HOM05D001794 ORTHO05D004177 2.9e-23 111.3 67 74.6
Glyma.01G175600 Glycine max HOM05D001794 ORTHO05D004177 3.8e-23 110.9 67 73.1
Glyma.11G067800 Glycine max HOM05D001794 ORTHO05D004177 3.8e-23 110.9 67 73.1
TAR376G0804 Trochodendron aralioides HOM05D001794 ORTHO05D004177 4.9e-23 110.5 63 79.4
SMO116G0376 Selaginella moellendorffii HOM05D001794 ORTHO05D004177 6.4e-23 110.2 67 76.1
AagrBONN_evm.TU.Sc2ySwM_368.2634 Anthoceros agrestis HOM05D001794 ORTHO05D004177 4.2e-22 107.5 67 74.6
Hund28964 Selenicereus undatus HOM05D001794 ORTHO05D004177 4.2e-22 107.5 67 71.6
Hund28966 Selenicereus undatus HOM05D001794 ORTHO05D004177 4.2e-22 107.5 67 71.6
ATR0733G007 Amborella trichopoda HOM05D001794 ORTHO05D004177 1.2e-21 105.9 67 74.6
Lj4g0016367 Lotus japonicus HOM05D001794 ORTHO05D004177 2.1e-21 105.1 67 73.1
CBR_g31678 Chara braunii HOM05D001794 ORTHO05D004177 2.7e-21 104.8 67 70.1
Phvul.003G253200 Phaseolus vulgaris HOM05D001794 ORTHO05D004177 5.1e-20 100.5 55 83.6
Nitab4.5_0000434g0160 Nicotiana tabacum HOM05D001794 ORTHO05D004177 2.5e-19 98.2 67 73.1
Cre14.g619133 Chlamydomonas reinhardtii HOM05D001794 ORTHO05D004177 5.8e-16 87.0 69 62.3
Nitab4.5_0003835g0030 Nicotiana tabacum HOM05D001794 ORTHO05D004177 9.9e-16 86.3 47 78.7
MCO12G459 Micromonas commoda HOM05D001794 ORTHO05D004177 1.1e-14 82.8 68 61.8
Glyma.01G100600 Glycine max HOM05D001794 ORTHO05D015431 1.4e-14 82.4 47 72.3
Actinidia19181 Actinidia chinensis HOM05D001794 ORTHO05D055678 2.1e-13 78.6 45 80.0
PRCOL_00005432 Prasinoderma coloniale HOM05D001794 ORTHO05D004177 2.1e-13 78.6 70 61.4
SEGI_03017 Sequoiadendron giganteum HOM05D001794 ORTHO05D015431 1.1e-09 66.2 33 93.9
Lj4g0012722 Lotus japonicus HOM05D001794 ORTHO05D015431 1.2e-08 62.8 34 73.5
SEGI_36122 Sequoiadendron giganteum HOM05D001794 ORTHO05D015431 5.8e-08 60.5 47 66.0
CiPaw.02G016800 Carya illinoinensis HOM05D001794 ORTHO05D004177 1.3e-07 59.3 34 82.4
Cfa024194 Carpinus fangiana HOM05D001794 ORTHO05D004177 2.2e-07 58.5 64 54.7
SEGI_17535 Sequoiadendron giganteum HOM05D001794 ORTHO05D015431 2.9e-07 58.2 34 70.6
Lalb_Chr05g0212821 Lupinus albus HOM05D001794 ORTHO05D015431 2.5e-06 55.1 33 78.8


User provided reference genes

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