Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p09260 Brassica napus HOM05D006543 ORTHO05D008308 2.5e-278 961.4 483 100.0
BolC9t53839H Brassica oleracea HOM05D006543 ORTHO05D008308 3.6e-277 957.6 483 98.1
BcaNung06574 Brassica carinata HOM05D006543 ORTHO05D008308 1.4e-273 945.7 483 97.1
A09p08200 Brassica napus HOM05D006543 ORTHO05D008308 9.3e-265 916.4 485 96.3
BraA09t36471Z Brassica rapa HOM05D006543 ORTHO05D008308 2.1e-264 915.2 485 96.1
Thhalv10004112m.g Eutrema salsugineum HOM05D006543 ORTHO05D008308 3.8e-250 867.8 483 87.6
Sp2g26410 Schrenkiella parvula HOM05D006543 ORTHO05D008308 3.9e-247 857.8 483 86.5
AL8G40370 Arabidopsis lyrata HOM05D006543 ORTHO05D008308 3.3e-246 854.7 485 86.8
AT5G63290 Arabidopsis thaliana HOM05D006543 ORTHO05D008308 1.4e-244 849.4 485 86.0
Carub.0008s2404 Capsella rubella HOM05D006543 ORTHO05D008308 1.9e-241 839.0 484 85.1
Aa31LG1G18710 Aethionema arabicum HOM05D006543 ORTHO05D008308 1.4e-236 822.8 483 83.2
THA.LOC104818195 Tarenaya hassleriana HOM05D006543 ORTHO05D008308 2.5e-225 785.4 485 79.2
TWI14G0972 Tripterygium wilfordii HOM05D006543 ORTHO05D008308 4.0e-183 645.2 483 65.2
CiPaw.11G012100 Carya illinoinensis HOM05D006543 ORTHO05D008308 5.2e-183 644.8 486 64.8
Hma1.2p1_0046F.1_g027560 Hydrangea macrophylla HOM05D006543 ORTHO05D008308 2.6e-182 642.5 486 65.2
Actinidia37252 Actinidia chinensis HOM05D006543 ORTHO05D008308 1.4e-180 636.7 486 66.3
FvH4_5g07331 Fragaria vesca HOM05D006543 ORTHO05D008308 4.1e-180 635.2 483 65.8
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 5.4e-180 634.8 480 65.8
Thecc.03G122600 Theobroma cacao HOM05D006543 ORTHO05D008308 7.1e-180 634.4 483 62.7
HanXRQChr05g0154751 Helianthus annuus HOM05D006543 ORTHO05D008308 6.0e-179 631.3 493 63.5
CSS0036636 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 1.3e-178 630.2 486 64.0
Lj5A100T59 Lonicera japonica HOM05D006543 ORTHO05D008308 1.7e-178 629.8 483 64.2
QL10p005246 Quercus lobata HOM05D006543 ORTHO05D008308 1.7e-178 629.8 488 65.4
Duzib068G0092 Durio zibethinus HOM05D006543 ORTHO05D008308 6.6e-178 627.9 483 62.3
Oeu045480.1 Olea europaea HOM05D006543 ORTHO05D008308 6.6e-178 627.9 492 63.8
RcHm_v2.0_Chr7g0191211 Rosa chinensis HOM05D006543 ORTHO05D008308 1.1e-177 627.1 483 65.0
Hund18538 Selenicereus undatus HOM05D006543 ORTHO05D008308 2.5e-177 625.9 484 64.0
Prupe.5G157200 Prunus persica HOM05D006543 ORTHO05D008308 7.3e-177 624.4 483 64.2
Atru.chr9.1008 Acer truncatum HOM05D006543 ORTHO05D008308 2.1e-176 622.9 484 63.6
COL.COLO4_09265 Corchorus olitorius HOM05D006543 ORTHO05D008308 2.8e-176 622.5 487 61.6
Lsat_1_v5_gn_5_13221 Lactuca sativa HOM05D006543 ORTHO05D008308 6.2e-176 621.3 488 63.3
Ciclev10020014m.g Citrus clementina HOM05D006543 ORTHO05D008308 1.4e-175 620.2 482 63.5
MSTRG.11294 Avicennia marina HOM05D006543 ORTHO05D008308 2.4e-175 619.4 487 63.9
AUR62025730 Chenopodium quinoa HOM05D006543 ORTHO05D008308 2.4e-175 619.4 483 63.4
vmacro16708 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 4.0e-175 618.6 490 64.3
CANSAT80G2173 Cannabis sativa HOM05D006543 ORTHO05D008308 5.2e-175 618.2 486 64.0
Rhsim12G0172000 Rhododendron simsii HOM05D006543 ORTHO05D008308 6.8e-175 617.8 488 64.3
Sabra12G0067500 Salix brachista HOM05D006543 ORTHO05D008308 8.9e-175 617.5 491 62.9
PGSC0003DMG400015239 Solanum tuberosum HOM05D006543 ORTHO05D008308 2.0e-174 616.3 483 62.1
Manes.06G115100 Manihot esculenta HOM05D006543 ORTHO05D008308 4.4e-174 615.1 492 62.2
Nitab4.5_0004750g0040 Nicotiana tabacum HOM05D006543 ORTHO05D008308 7.6e-174 614.4 483 61.7
Potri.012G092900 Populus trichocarpa HOM05D006543 ORTHO05D008308 9.9e-174 614.0 498 61.6
AUR62001276 Chenopodium quinoa HOM05D006543 ORTHO05D008308 1.3e-173 613.6 484 63.2
Sopen03g030490 Solanum pennellii HOM05D006543 ORTHO05D008308 1.3e-173 613.6 483 61.7
Gohir.A09G244900 Gossypium hirsutum HOM05D006543 ORTHO05D008308 1.7e-173 613.2 483 61.5
ECA246G2708 Erigeron canadensis HOM05D006543 ORTHO05D008308 2.2e-173 612.8 464 65.1
MD14G1163800 Malus domestica HOM05D006543 ORTHO05D008308 3.2e-172 609.0 488 63.1
TAR374G1424 Trochodendron aralioides HOM05D006543 ORTHO05D008308 5.4e-172 608.2 486 62.3
Gorai.006G270300 Gossypium raimondii HOM05D006543 ORTHO05D008308 7.1e-172 607.8 480 60.8
Solyc03g111360.3 Solanum lycopersicum HOM05D006543 ORTHO05D008308 9.2e-172 607.4 483 61.1
Nitab4.5_0003282g0090 Nicotiana tabacum HOM05D006543 ORTHO05D008308 2.1e-171 606.3 483 61.5
MBI06_g38704_MAGBIO Magnolia biondii HOM05D006543 ORTHO05D008308 6.0e-171 604.7 490 63.1
CAN.G352.10 Capsicum annuum HOM05D006543 ORTHO05D008308 1.7e-170 603.2 485 61.4
Cc04_g10340 Coffea canephora HOM05D006543 ORTHO05D008308 5.1e-170 601.7 482 62.7
Peaxi162Scf00089g00625 Petunia axillaris HOM05D006543 ORTHO05D008308 7.3e-169 597.8 480 61.2
PGR044G1877 Punica granatum HOM05D006543 ORTHO05D008308 6.2e-168 594.7 489 60.9
Aqoxy5G03584 Aquilegia oxysepala HOM05D006543 ORTHO05D008308 1.4e-167 593.6 492 59.6
arahy.Tifrunner.gnm1.ann1.8LT8QW Arachis hypogaea HOM05D006543 ORTHO05D008308 2.4e-167 592.8 480 60.8
Sed0023544 Sechium edule HOM05D006543 ORTHO05D008308 2.4e-167 592.8 483 60.9
Migut.I00467 Erythranthe guttata HOM05D006543 ORTHO05D008308 4.0e-167 592.0 499 62.1
EL10Ac7g18072 Beta vulgaris HOM05D006543 ORTHO05D008308 9.0e-167 590.9 483 61.5
Phvul.009G169000 Phaseolus vulgaris HOM05D006543 ORTHO05D008308 9.0e-167 590.9 483 61.3
MELO3C026233.2 Cucumis melo HOM05D006543 ORTHO05D008308 3.4e-166 589.0 448 63.6
GSVIVG01007545001 Vitis vinifera HOM05D006543 ORTHO05D008308 3.4e-166 589.0 486 61.9
arahy.Tifrunner.gnm1.ann1.YD5AXN Arachis hypogaea HOM05D006543 ORTHO05D008308 9.9e-166 587.4 481 60.5
Glyma.04G192800 Glycine max HOM05D006543 ORTHO05D008308 1.3e-165 587.0 485 60.4
CsaV3_1G000810 Cucumis sativus L. HOM05D006543 ORTHO05D008308 1.1e-164 583.9 448 63.6
Lalb_Chr08g0236931 Lupinus albus HOM05D006543 ORTHO05D008308 3.5e-163 578.9 484 58.7
Psat5g141840 Pisum sativum HOM05D006543 ORTHO05D008308 5.1e-162 575.1 484 59.3
Lj1g0002208 Lotus japonicus HOM05D006543 ORTHO05D008308 1.5e-161 573.5 483 59.4
Medtr3g075110 Medicago truncatula HOM05D006543 ORTHO05D008308 1.5e-161 573.5 485 60.0
TPR.G24245 Trifolium pratense HOM05D006543 ORTHO05D008308 1.5e-161 573.5 483 60.0
ClCG06G017630 Citrullus lanatus HOM05D006543 ORTHO05D008308 1.5e-158 563.5 483 59.0
Sc04g0000970 Simmondsia chinensis HOM05D006543 ORTHO05D008308 4.3e-153 545.4 483 57.8
Zm00001eb001600 Zea mays HOM05D006543 ORTHO05D008308 1.6e-152 543.5 462 58.9
Lsat_1_v5_gn_4_53181 Lactuca sativa HOM05D006543 ORTHO05D008308 6.2e-152 541.6 502 56.8
PSO729G0022 Papaver somniferum HOM05D006543 ORTHO05D008308 6.2e-152 541.6 482 57.7
SGA_v2.0_scaffold338G49246 Striga asiatica HOM05D006543 ORTHO05D008308 4.5e-150 535.4 447 60.6
Ah.15g095320 Amaranthus hybridus HOM05D006543 ORTHO05D008308 2.2e-149 533.1 483 56.9
CDE04G0939 Ceratophyllum demersum HOM05D006543 ORTHO05D008308 1.6e-147 526.9 488 55.9
Os12g0270100 Oryza sativa ssp. japonica HOM05D006543 ORTHO05D008308 2.7e-147 526.2 430 59.8
Gohir.D09G245800 Gossypium hirsutum HOM05D006543 ORTHO05D008308 2.9e-141 506.1 374 63.9
BcaB04g19911 Brassica carinata HOM05D006543 ORTHO05D008308 1.2e-139 500.7 273 92.3
unitig_22.g5878 Utricularia gibba HOM05D006543 ORTHO05D008308 2.0e-134 483.4 383 59.0
SEGI_06622 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 2.5e-132 476.5 464 51.3
Dinv11106 Davidia involucrata HOM05D006543 ORTHO05D008308 7.2e-132 474.9 320 71.6
FvH4_5g07462 Fragaria vesca HOM05D006543 ORTHO05D008308 3.0e-130 469.5 381 62.5
Ca_16091_v3 Cicer arietinum L. HOM05D006543 ORTHO05D008308 2.4e-127 459.9 339 65.5
CARHR277150 Cardamine hirsuta HOM05D006543 ORTHO05D008308 1.0e-125 454.5 274 82.5
VMungo1309G1872 Vigna mungo HOM05D006543 ORTHO05D008308 5.0e-125 452.2 317 66.9
Pp3c13_23570 Physcomitrium patens HOM05D006543 ORTHO05D008308 2.1e-123 446.8 469 48.2
Mapoly0005s0190 Marchantia polymorpha HOM05D006543 ORTHO05D008308 2.5e-116 423.3 492 43.3
CARHR277160 Cardamine hirsuta HOM05D006543 ORTHO05D008308 1.3e-109 401.0 218 88.1
SMO364G0036 Selaginella moellendorffii HOM05D006543 ORTHO05D008308 4.2e-108 396.0 439 46.7
PRCOL_00001606 Prasinoderma coloniale HOM05D006543 ORTHO05D008308 1.2e-97 361.3 451 43.5
BcaB01g05367 Brassica carinata HOM05D006543 ORTHO05D008308 2.0e-97 360.5 232 81.0
CBR_g58805 Chara braunii HOM05D006543 ORTHO05D008308 7.0e-95 352.1 421 43.2
vmacro23154 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 5.9e-94 349.0 256 65.2
ATR0733G153 Amborella trichopoda HOM05D006543 ORTHO05D008308 4.2e-92 342.8 359 50.1
Cre03.g171461 Chlamydomonas reinhardtii HOM05D006543 ORTHO05D008308 1.0e-90 338.2 393 44.0
Nn3g16581 Nelumbo nucifera HOM05D006543 ORTHO05D008308 4.1e-87 326.2 267 61.4
CSS0033277 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 1.6e-86 324.3 300 55.3
AagrBONN_evm.TU.Sc2ySwM_344.2040 Anthoceros agrestis HOM05D006543 ORTHO05D008308 5.9e-86 322.4 396 42.2
MCO01G029 Micromonas commoda HOM05D006543 ORTHO05D008308 4.3e-84 316.2 458 40.6
Glyma.06G173133 Glycine max HOM05D006543 ORTHO05D008308 1.2e-81 308.1 240 60.0
vmacro16659 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 2.9e-80 303.5 320 52.2
Actinidia36787 Actinidia chinensis HOM05D006543 ORTHO05D008308 5.6e-68 262.7 251 54.6
MD06G1157200 Malus domestica HOM05D006543 ORTHO05D008308 2.1e-62 244.2 202 64.9
SEGI_28812 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 1.2e-54 218.4 179 58.7
Oeu045471.1 Olea europaea HOM05D006543 ORTHO05D008308 3.2e-47 193.7 128 72.7
Oeu037566.1 Olea europaea HOM05D006543 ORTHO05D008308 4.2e-47 193.4 128 73.4
Glyma.06G173067 Glycine max HOM05D006543 ORTHO05D008308 1.3e-45 188.3 196 53.1
CAN.G352.9 Capsicum annuum HOM05D006543 ORTHO05D003127 1.1e-39 168.7 116 72.4
FvH4_5g07400 Fragaria vesca HOM05D006543 ORTHO05D008308 6.7e-29 132.9 108 63.9
MD06G1156000 Malus domestica HOM05D006543 ORTHO05D008308 7.6e-25 119.4 116 51.7
CAN.G352.8 Capsicum annuum HOM05D006543 ORTHO05D008308 1.1e-23 115.5 100 52.0
C09p09270 Brassica napus HOM05D039327 ORTHO05D041005 6.3e-19 99.8 53 92.5
BolC9t53840H Brassica oleracea HOM05D039327 ORTHO05D041005 6.3e-19 99.8 53 92.5
BcaNung00695 Brassica carinata HOM05D000342 ORTHO05D000217 5.3e-10 70.1 33 100.0
Cfa009975 Carpinus fangiana HOM05D006543 ORTHO05D008308 7.2e-07 59.7 44 59.1


User provided reference genes

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