Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p36230 Brassica napus HOM05D006873 ORTHO05D008668 2.3e-237 825.5 513 100.0
BolC6t38744H Brassica oleracea HOM05D006873 ORTHO05D008668 3.7e-227 791.6 516 96.9
BcaC08g45836 Brassica carinata HOM05D006873 ORTHO05D008668 1.3e-224 783.1 517 96.1
A07p31180 Brassica napus HOM05D006873 ORTHO05D008668 3.4e-217 758.4 513 87.7
BraA07t30751Z Brassica rapa HOM05D006873 ORTHO05D008668 1.7e-216 756.1 513 87.5
BcaB03g15534 Brassica carinata HOM05D006873 ORTHO05D008668 7.3e-175 617.8 533 76.4
Sp5g25330 Schrenkiella parvula HOM05D006873 ORTHO05D008668 7.0e-170 601.3 543 72.7
Thhalv10018395m.g Eutrema salsugineum HOM05D006873 ORTHO05D008668 3.4e-156 555.8 541 70.1
Carub.0002s1690 Capsella rubella HOM05D006873 ORTHO05D008668 4.2e-138 495.7 559 61.2
AT1G70200 Arabidopsis thaliana HOM05D006873 ORTHO05D008668 2.1e-137 493.4 545 61.5
AL2G29500 Arabidopsis lyrata HOM05D006873 ORTHO05D008668 1.2e-132 477.6 545 58.7
CARHR063320 Cardamine hirsuta HOM05D006873 ORTHO05D008668 2.3e-128 463.4 540 61.3
Aa31LG4G10700 Aethionema arabicum HOM05D006873 ORTHO05D008668 3.6e-105 386.3 553 54.6
THA.LOC104823082 Tarenaya hassleriana HOM05D006873 ORTHO05D008668 1.6e-81 307.8 549 43.4
Thecc.02G242900 Theobroma cacao HOM05D006873 ORTHO05D008668 1.2e-55 221.9 421 39.2
Gohir.A08G123000 Gossypium hirsutum HOM05D006873 ORTHO05D008668 1.4e-53 214.9 425 43.5
Gorai.004G149100 Gossypium raimondii HOM05D006873 ORTHO05D008668 1.6e-52 211.5 189 58.2
Gohir.D08G144400 Gossypium hirsutum HOM05D006873 ORTHO05D008668 2.0e-52 211.1 174 61.5
Duzib248G0774 Durio zibethinus HOM05D006873 ORTHO05D008668 2.3e-51 207.6 418 39.5
Atru.chr11.1966 Acer truncatum HOM05D006873 ORTHO05D008668 3.0e-51 207.2 419 36.5
CSS0006883 Camellia sinensis var. sinensis HOM05D006873 ORTHO05D008668 3.9e-51 206.8 418 37.6
CSS0023446 Camellia sinensis var. sinensis HOM05D006873 ORTHO05D008668 8.6e-51 205.7 421 37.3
CiPaw.06G074700 Carya illinoinensis HOM05D006873 ORTHO05D008668 5.6e-50 203.0 422 36.3
Manes.05G090700 Manihot esculenta HOM05D006873 ORTHO05D008668 7.3e-50 202.6 504 36.3
Cpa.g.sc5.353 Carica papaya HOM05D006873 ORTHO05D008668 3.6e-49 200.3 526 35.2
COL.COLO4_37899 Corchorus olitorius HOM05D006873 ORTHO05D008668 4.7e-49 199.9 161 60.9
Lj2g0015184 Lotus japonicus HOM05D006873 ORTHO05D008668 4.7e-49 199.9 417 34.3
Haze_12141 Corylus avellana HOM05D006873 ORTHO05D008668 1.1e-48 198.7 215 49.8
Potri.008G146700 Populus trichocarpa HOM05D006873 ORTHO05D008668 1.8e-48 198.0 419 36.0
TWI18G0196 Tripterygium wilfordii HOM05D006873 ORTHO05D008668 1.8e-48 198.0 439 35.8
CANSAT01G2194 Cannabis sativa HOM05D006873 ORTHO05D008668 4.0e-48 196.8 417 38.1
MD16G1087500 Malus domestica HOM05D006873 ORTHO05D008668 4.0e-48 196.8 423 34.3
Sabra08G0111700 Salix brachista HOM05D006873 ORTHO05D008668 2.6e-47 194.1 416 37.3
Lalb_Chr05g0217211 Lupinus albus HOM05D006873 ORTHO05D008668 3.4e-47 193.7 416 32.9
PGR119G2095 Punica granatum HOM05D006873 ORTHO05D008668 4.4e-47 193.4 422 35.8
Actinidia15007 Actinidia chinensis HOM05D006873 ORTHO05D008668 5.8e-47 193.0 216 48.6
MSTRG.7876 Avicennia marina HOM05D006873 ORTHO05D008668 5.8e-47 193.0 299 42.8
Ciclev10031560m.g Citrus clementina HOM05D006873 ORTHO05D008668 7.5e-47 192.6 416 35.3
QL03p062447 Quercus lobata HOM05D006873 ORTHO05D008668 3.7e-46 190.3 212 48.1
SalBow2G2439 Salvia bowleyana HOM05D006873 ORTHO05D008668 4.9e-46 189.9 221 46.6
Cfa009104 Carpinus fangiana HOM05D006873 ORTHO05D008668 6.4e-46 189.5 417 35.7
SalBow2G2215 Salvia bowleyana HOM05D006873 ORTHO05D008668 1.9e-45 188.0 221 46.2
Prupe.1G259500 Prunus persica HOM05D006873 ORTHO05D008668 3.2e-45 187.2 309 40.8
Sopen05g002090 Solanum pennellii HOM05D006873 ORTHO05D008668 4.1e-45 186.8 168 53.0
Cc11_g14280 Coffea canephora HOM05D006873 ORTHO05D008668 5.4e-45 186.4 209 46.9
Migut.L01442 Erythranthe guttata HOM05D006873 ORTHO05D008668 5.4e-45 186.4 162 56.2
Nitab4.5_0009368g0020 Nicotiana tabacum HOM05D006873 ORTHO05D008668 5.4e-45 186.4 166 52.4
Nitab4.5_0000257g0240 Nicotiana tabacum HOM05D006873 ORTHO05D008668 9.2e-45 185.7 166 51.8
AUR62020959 Chenopodium quinoa HOM05D006873 ORTHO05D008668 1.2e-44 185.3 409 35.7
FAN22G1812 Fragaria x ananassa HOM05D006873 ORTHO05D008668 1.6e-44 184.9 168 56.5
TPR.G13500 Trifolium pratense HOM05D006873 ORTHO05D008668 1.6e-44 184.9 423 33.3
VMungo1215G0960 Vigna mungo HOM05D006873 ORTHO05D008668 2.7e-44 184.1 424 34.2
Phvul.002G074900 Phaseolus vulgaris HOM05D006873 ORTHO05D008668 3.5e-44 183.7 417 34.1
FvH4_4g34980 Fragaria vesca HOM05D006873 ORTHO05D008668 7.8e-44 182.6 164 57.3
Lsat_1_v5_gn_8_160241 Lactuca sativa HOM05D006873 ORTHO05D008668 7.8e-44 182.6 267 45.3
SGA_v2.0_scaffold166G38344 Striga asiatica HOM05D006873 ORTHO05D008668 1.3e-43 181.8 183 48.6
arahy.Tifrunner.gnm1.ann1.8WMT1Z Arachis hypogaea HOM05D006873 ORTHO05D008668 1.7e-43 181.4 449 32.1
Glyma.02G030100 Glycine max HOM05D006873 ORTHO05D008668 1.7e-43 181.4 414 32.1
unitig_26.g10334 Utricularia gibba HOM05D006873 ORTHO05D008668 1.7e-43 181.4 168 51.8
arahy.Tifrunner.gnm1.ann1.MXA56B Arachis hypogaea HOM05D006873 ORTHO05D008668 2.3e-43 181.0 412 32.8
Glyma.01G035700 Glycine max HOM05D006873 ORTHO05D008668 3.0e-43 180.6 414 32.6
RcHm_v2.0_Chr4g0444501 Rosa chinensis HOM05D006873 ORTHO05D008668 3.0e-43 180.6 159 59.1
Ca_04627_v3 Cicer arietinum L. HOM05D006873 ORTHO05D008668 8.6e-43 179.1 212 47.2
PGSC0003DMG400015575 Solanum tuberosum HOM05D006873 ORTHO05D008668 8.6e-43 179.1 406 33.7
GSVIVG01020168001 Vitis vinifera HOM05D006873 ORTHO05D008668 1.1e-42 178.7 183 50.3
Aqoxy3G03077 Aquilegia oxysepala HOM05D006873 ORTHO05D008668 1.5e-42 178.3 412 33.7
vmacro16278 Vaccinium macrocarpon HOM05D006873 ORTHO05D008668 1.5e-42 178.3 205 44.9
Nn3g16974 Nelumbo nucifera HOM05D006873 ORTHO05D008668 2.5e-42 177.6 419 33.7
ClCG09G020710 Citrullus lanatus HOM05D006873 ORTHO05D008668 4.3e-42 176.8 413 32.4
PSO832G2329 Papaver somniferum HOM05D006873 ORTHO05D008668 5.6e-42 176.4 417 31.4
Solyc05g006070.4 Solanum lycopersicum HOM05D006873 ORTHO05D008668 5.6e-42 176.4 405 33.6
ECA234G0329 Erigeron canadensis HOM05D000967 ORTHO05D000796 7.3e-42 176.0 167 50.9
FAN17G1454 Fragaria x ananassa HOM05D006873 ORTHO05D008668 1.2e-41 175.3 563 32.0
PSO063G4822 Papaver somniferum HOM05D006873 ORTHO05D008668 1.2e-41 175.3 415 31.1
Hund25317 Selenicereus undatus HOM05D006873 ORTHO05D008668 1.2e-41 175.3 161 54.0
Sc11g0001350 Simmondsia chinensis HOM05D006873 ORTHO05D008668 1.2e-41 175.3 163 53.4
arahy.Tifrunner.gnm1.ann1.RPT3RX Arachis hypogaea HOM05D006873 ORTHO05D009096 1.6e-41 174.9 436 30.3
MELO3C002912.2 Cucumis melo HOM05D006873 ORTHO05D008668 2.1e-41 174.5 413 32.7
Eucgr.B02558 Eucalyptus grandis HOM05D006873 ORTHO05D008668 2.1e-41 174.5 420 32.4
HanXRQChr08g0209031 Helianthus annuus HOM05D006873 ORTHO05D008668 6.2e-41 172.9 156 53.2
Peaxi162Scf00421g00062 Petunia axillaris HOM05D006873 ORTHO05D008668 8.1e-41 172.6 401 31.9
ATR1149G030 Amborella trichopoda HOM05D006873 ORTHO05D008668 1.4e-40 171.8 165 53.3
FAN07G2203 Fragaria x ananassa HOM05D006873 ORTHO05D008668 3.1e-40 170.6 560 31.1
EL10Ac6g13256 Beta vulgaris HOM05D006873 ORTHO05D008668 4.0e-40 170.2 418 33.3
DCAR_026551 Daucus carota HOM05D006873 ORTHO05D008668 6.8e-40 169.5 463 34.6
Medtr5g035330 Medicago truncatula HOM05D006873 ORTHO05D008668 1.2e-39 168.7 410 32.7
Sed0022830 Sechium edule HOM05D006873 ORTHO05D008668 1.2e-39 168.7 417 31.9
arahy.Tifrunner.gnm1.ann1.N2BTYN Arachis hypogaea HOM05D006873 ORTHO05D008668 1.5e-39 168.3 445 31.2
CDE07G1306 Ceratophyllum demersum HOM05D005206 ORTHO05D006219 1.7e-38 164.9 425 33.4
Rhsim12G0124200 Rhododendron simsii HOM05D006873 ORTHO05D008668 5.4e-37 159.8 440 37.0
Psat2g111440 Pisum sativum HOM05D006873 ORTHO05D008668 1.7e-35 154.8 152 50.0
TAR622G0254 Trochodendron aralioides HOM05D006873 ORTHO05D008668 3.9e-35 153.7 418 31.8
Ah.04g149970 Amaranthus hybridus HOM05D006873 ORTHO05D008668 6.6e-35 152.9 163 47.2
HPP92_005898 Vanilla planifolia HOM05D006873 ORTHO05D008668 2.8e-33 147.5 216 40.3
Mapoly0001s0497 Marchantia polymorpha HOM05D006873 ORTHO05D008668 6.2e-33 146.4 157 47.8
SEGI_33585 Sequoiadendron giganteum HOM05D006873 ORTHO05D008668 1.9e-29 134.8 153 47.7
AagrBONN_evm.TU.Sc2ySwM_362.2365 Anthoceros agrestis HOM05D006873 ORTHO05D008668 3.2e-29 134.0 168 42.9
CBR_g81555 Chara braunii HOM05D006873 ORTHO05D000353 3.0e-27 127.5 178 39.3
Zm00001eb234150 Zea mays HOM05D006873 ORTHO05D008668 1.1e-26 125.6 155 43.9
Dinv31000 Davidia involucrata HOM05D006873 ORTHO05D008668 1.9e-26 124.8 401 29.4
Dinv31103 Davidia involucrata HOM05D006873 ORTHO05D008668 1.9e-26 124.8 401 29.4
Os02g0326200 Oryza sativa ssp. japonica HOM05D006873 ORTHO05D008668 3.3e-26 124.0 150 45.3
CDE04G1917 Ceratophyllum demersum HOM05D000231 ORTHO05D008668 1.6e-25 121.7 153 46.4
Oeu001659.1 Olea europaea HOM05D006873 ORTHO05D008668 2.1e-25 121.3 141 46.8
Pp3c1_41900 Physcomitrium patens HOM05D006873 ORTHO05D008668 2.8e-25 120.9 160 40.6
CsaV3_5G025700 Cucumis sativus L. HOM05D006873 ORTHO05D008668 5.3e-24 116.7 340 29.1
MBI15_g12637_MAGBIO Magnolia biondii HOM05D006873 ORTHO05D008668 5.3e-24 116.7 345 29.0
SMO146G0062 Selaginella moellendorffii HOM05D006873 ORTHO05D008668 4.9e-22 110.2 196 33.2
Duzib251G0321 Durio zibethinus HOM05D006873 ORTHO05D008668 1.9e-21 108.2 139 44.6
AUR62018459 Chenopodium quinoa HOM05D000676 ORTHO05D001458 6.7e-19 99.8 76 60.5
Oeu001660.1 Olea europaea HOM05D006873 ORTHO05D008668 7.1e-13 79.7 52 67.3
Ah.13g077500 Amaranthus hybridus HOM05D006873 ORTHO05D008668 7.9e-12 76.3 65 53.8
CsaV3_5G025690 Cucumis sativus L. HOM05D006873 ORTHO05D008668 6.2e-09 66.6 60 51.7
CsaV3_5G025680 Cucumis sativus L. HOM05D006873 ORTHO05D008668 5.3e-08 63.5 60 50.0


User provided reference genes

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