Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p62970 Brassica napus HOM05D060235 ORTHO05D032988 1.5e-36 155.6 74 100.0
C05p41170 Brassica napus HOM05D060235 ORTHO05D032988 3.6e-35 151.0 74 97.3
AL6G32770 Arabidopsis lyrata HOM05D000234 ORTHO05D001258 1.9e-07 58.9 57 57.9
AT5G21150 Arabidopsis thaliana HOM05D000234 ORTHO05D001258 2.5e-07 58.5 57 57.9
Aa31LG1G13630 Aethionema arabicum HOM05D000234 ORTHO05D001258 3.2e-07 58.2 45 64.4
AL6G32580 Arabidopsis lyrata HOM05D000234 ORTHO05D001258 3.2e-07 58.2 45 64.4
A10p18930 Brassica napus HOM05D000234 ORTHO05D001258 3.2e-07 58.2 40 70.0
BraA10t43970Z Brassica rapa HOM05D000234 ORTHO05D001258 3.2e-07 58.2 40 70.0
Lj5g0003224 Lotus japonicus HOM05D000234 ORTHO05D001258 3.2e-07 58.2 58 56.9
Medtr5g087870 Medicago truncatula HOM05D000234 ORTHO05D001258 5.5e-07 57.4 45 64.4
TPR.G10048 Trifolium pratense HOM05D000258 ORTHO05D032988 5.5e-07 57.4 45 64.4
BcaC04g19498 Brassica carinata HOM05D000234 ORTHO05D001258 7.1e-07 57.0 40 70.0
A10p19040 Brassica napus HOM05D000234 ORTHO05D001258 7.1e-07 57.0 40 70.0
C09p54910 Brassica napus HOM05D000234 ORTHO05D001258 7.1e-07 57.0 40 70.0
BolC9t58352H Brassica oleracea HOM05D000234 ORTHO05D001258 7.1e-07 57.0 40 70.0
BolC9t58368H Brassica oleracea HOM05D000234 ORTHO05D001258 7.1e-07 57.0 40 70.0
Ca_06159_v3 Cicer arietinum L. HOM05D000234 ORTHO05D001258 7.1e-07 57.0 45 64.4
Medtr3g078647 Medicago truncatula HOM05D000234 ORTHO05D001258 9.3e-07 56.6 58 56.9
Psat2g022680 Pisum sativum HOM05D000234 ORTHO05D001258 9.3e-07 56.6 45 64.4
Sc15g0007310 Simmondsia chinensis HOM05D000234 ORTHO05D001258 9.3e-07 56.6 58 56.9
Ah.01g014670 Amaranthus hybridus HOM05D000234 ORTHO05D001258 1.2e-06 56.2 58 56.9
EL10Ac9g22361 Beta vulgaris HOM05D000234 ORTHO05D001258 1.2e-06 56.2 58 56.9
BcaB05g22769 Brassica carinata HOM05D000234 ORTHO05D001258 1.2e-06 56.2 47 63.8
BcaB08g36478 Brassica carinata HOM05D000234 ORTHO05D001258 1.2e-06 56.2 40 70.0
Medtr5g087890 Medicago truncatula HOM05D000234 ORTHO05D001258 1.6e-06 55.8 45 62.2
Psat5g110040 Pisum sativum HOM05D000234 ORTHO05D001258 1.6e-06 55.8 45 64.4
Sp6g23370 Schrenkiella parvula HOM05D000234 ORTHO05D001258 1.6e-06 55.8 57 57.9
TPR.G27312 Trifolium pratense HOM05D000234 ORTHO05D001258 1.6e-06 55.8 45 64.4
arahy.Tifrunner.gnm1.ann1.FWIM6U Arachis hypogaea HOM05D000234 ORTHO05D001258 2.1e-06 55.5 45 64.4
Ca_16219_v3 Cicer arietinum L. HOM05D000234 ORTHO05D001258 2.1e-06 55.5 45 64.4
Lj6g0000620 Lotus japonicus HOM05D000234 ORTHO05D001258 2.1e-06 55.5 58 55.2
Phvul.006G021200 Phaseolus vulgaris HOM05D000234 ORTHO05D001258 2.1e-06 55.5 45 64.4
VMungo0540G1957 Vigna mungo HOM05D000234 ORTHO05D001258 2.1e-06 55.5 45 64.4
BcaC03g13836 Brassica carinata HOM05D000234 ORTHO05D001258 2.7e-06 55.1 47 61.7
BNapus_Darmor_BZH_scaffold_38p01070 Brassica napus HOM05D000234 ORTHO05D001258 2.7e-06 55.1 47 61.7
BolC2t07102H Brassica oleracea HOM05D000234 ORTHO05D001258 2.7e-06 55.1 47 61.7
BraA02t05621Z Brassica rapa HOM05D000234 ORTHO05D001258 2.7e-06 55.1 47 61.7
Carub.0006s1946 Capsella rubella HOM05D000234 ORTHO05D001258 2.7e-06 55.1 57 56.1
AUR62037160 Chenopodium quinoa HOM05D000234 ORTHO05D001258 2.7e-06 55.1 58 55.2
Lalb_Chr15g0080261 Lupinus albus HOM05D000234 ORTHO05D001258 2.7e-06 55.1 58 55.2
BcaB08g36476 Brassica carinata HOM05D000234 ORTHO05D001258 3.5e-06 54.7 40 67.5
BraA10t43982Z Brassica rapa HOM05D000234 ORTHO05D001258 3.5e-06 54.7 40 67.5
LjContig00564g0023857 Lotus japonicus HOM05D000234 ORTHO05D001258 4.6e-06 54.3 45 62.2
Medtr6g043180 Medicago truncatula HOM05D000234 ORTHO05D001258 4.6e-06 54.3 39 69.2
Hund01351 Selenicereus undatus HOM05D000234 ORTHO05D001258 4.6e-06 54.3 58 55.2
TPR.G22223 Trifolium pratense HOM05D000234 ORTHO05D001258 4.6e-06 54.3 39 69.2
Ah.01g014680 Amaranthus hybridus HOM05D000234 ORTHO05D001258 6.0e-06 53.9 45 62.2
AT5G21030 Arabidopsis thaliana HOM05D000234 ORTHO05D001258 6.0e-06 53.9 40 67.5
C09p55050 Brassica napus HOM05D000234 ORTHO05D001258 6.0e-06 53.9 47 57.4
Lj5g0007702 Lotus japonicus HOM05D000234 ORTHO05D001258 6.0e-06 53.9 58 53.4
Lj5g0011195 Lotus japonicus HOM05D000234 ORTHO05D001258 6.0e-06 53.9 58 53.4
Sp6g23510 Schrenkiella parvula HOM05D000234 ORTHO05D001258 6.0e-06 53.9 45 57.8
Thhalv10015501m.g Eutrema salsugineum HOM05D000234 ORTHO05D001258 7.9e-06 53.5 40 67.5
Lj9C704G17 Lonicera japonica HOM05D000234 ORTHO05D001258 7.9e-06 53.5 45 62.2
Lalb_Chr04g0249631 Lupinus albus HOM05D000234 ORTHO05D001258 7.9e-06 53.5 45 62.2
Lalb_Chr17g0347571 Lupinus albus HOM05D000234 ORTHO05D001258 7.9e-06 53.5 45 62.2
Phvul.008G206500 Phaseolus vulgaris HOM05D000234 ORTHO05D001258 7.9e-06 53.5 45 62.2


User provided reference genes

Program Settings