Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p28760 Brassica napus HOM05D003924 ORTHO05D020089 3.3e-56 221.5 110 100.0
BcaB01g03607 Brassica carinata HOM05D003924 ORTHO05D005216 1.7e-33 146.0 92 79.3
BcaB01g03658 Brassica carinata HOM05D003924 ORTHO05D005216 1.7e-33 146.0 92 79.3
A03p21980 Brassica napus HOM05D003924 ORTHO05D005216 1.7e-33 146.0 92 79.3
C03p26070 Brassica napus HOM05D003924 ORTHO05D005216 1.7e-33 146.0 92 79.3
BolC3t14991H Brassica oleracea HOM05D003924 ORTHO05D005216 1.7e-33 146.0 92 79.3
BraA03t11433Z Brassica rapa HOM05D003924 ORTHO05D005216 1.7e-33 146.0 92 79.3
AT2G39260 Arabidopsis thaliana HOM05D003924 ORTHO05D005216 5.6e-32 141.0 92 77.2
AL4G36570 Arabidopsis lyrata HOM05D003924 ORTHO05D005216 7.3e-32 140.6 92 76.1
CARHR134000 Cardamine hirsuta HOM05D003924 ORTHO05D005216 7.3e-32 140.6 92 76.1
Carub.0004s2131 Capsella rubella HOM05D003924 ORTHO05D005216 1.6e-31 139.4 92 75.0
Thhalv10016159m.g Eutrema salsugineum HOM05D003924 ORTHO05D005216 1.6e-31 139.4 92 76.1
Aa31LG5G20240 Aethionema arabicum HOM05D003924 ORTHO05D005216 6.2e-31 137.5 87 77.0
Sp4g21570 Schrenkiella parvula HOM05D003924 ORTHO05D005216 1.4e-30 136.3 87 79.3
SpUn0018_0100 Schrenkiella parvula HOM05D003924 ORTHO05D005216 1.4e-30 136.3 87 79.3
THA.LOC104809987 Tarenaya hassleriana HOM05D003924 ORTHO05D005216 4.4e-29 131.3 92 69.6
MD01G1113500 Malus domestica HOM05D003924 ORTHO05D005216 1.7e-28 129.4 87 72.4
VMungo1309G1679 Vigna mungo HOM05D003924 ORTHO05D005216 1.7e-28 129.4 87 71.3
Ah.16g101370 Amaranthus hybridus HOM05D003924 ORTHO05D005216 4.9e-28 127.9 87 71.3
MD07G1181100 Malus domestica HOM05D003924 ORTHO05D005216 6.4e-28 127.5 87 71.3
RcHm_v2.0_Chr3g0482831 Rosa chinensis HOM05D003924 ORTHO05D005216 6.4e-28 127.5 87 71.3
Aqoxy6G01538 Aquilegia oxysepala HOM05D003924 ORTHO05D005216 8.3e-28 127.1 87 70.1
FAN17G0927 Fragaria x ananassa HOM05D003924 ORTHO05D005216 8.3e-28 127.1 87 70.1
Glyma.09G087900 Glycine max HOM05D003924 ORTHO05D005216 8.3e-28 127.1 87 70.1
FAN07G1557 Fragaria x ananassa HOM05D003924 ORTHO05D005216 1.1e-27 126.7 87 71.3
FAN12G0529 Fragaria x ananassa HOM05D003924 ORTHO05D005216 1.1e-27 126.7 87 71.3
FAN22G0546 Fragaria x ananassa HOM05D003924 ORTHO05D005216 1.4e-27 126.3 87 70.1
Glyma.15G194000 Glycine max HOM05D003924 ORTHO05D005216 1.9e-27 125.9 87 70.1
Hma1.2p1_3877F.1_g337880 Hydrangea macrophylla HOM05D003924 ORTHO05D005216 1.9e-27 125.9 87 69.0
Lalb_Chr11g0073411 Lupinus albus HOM05D003924 ORTHO05D005216 1.9e-27 125.9 87 69.0
Phvul.009G216500 Phaseolus vulgaris HOM05D003924 ORTHO05D005216 1.9e-27 125.9 87 70.1
Lalb_Chr08g0233271 Lupinus albus HOM05D003924 ORTHO05D005216 2.4e-27 125.6 92 67.4
AUR62023203 Chenopodium quinoa HOM05D003924 ORTHO05D005216 3.2e-27 125.2 87 69.0
AUR62023249 Chenopodium quinoa HOM05D003924 ORTHO05D005216 3.2e-27 125.2 87 69.0
Ciclev10018539m.g Citrus clementina HOM05D003924 ORTHO05D005216 3.2e-27 125.2 87 69.0
DCAR_027685 Daucus carota HOM05D003924 ORTHO05D005216 3.2e-27 125.2 87 69.0
FvH4_4g12630 Fragaria vesca HOM05D003924 ORTHO05D005216 3.2e-27 125.2 87 70.1
Nn2g10624 Nelumbo nucifera HOM05D003924 ORTHO05D005216 3.2e-27 125.2 87 69.0
Cpa.g.sc1.275 Carica papaya HOM05D003924 ORTHO05D005216 4.1e-27 124.8 87 71.3
Prupe.2G220200 Prunus persica HOM05D003924 ORTHO05D005216 4.1e-27 124.8 87 70.1
arahy.Tifrunner.gnm1.ann1.MQZ1GR Arachis hypogaea HOM05D003924 ORTHO05D005216 7.1e-27 124.0 87 67.8
arahy.Tifrunner.gnm1.ann1.VLH7KT Arachis hypogaea HOM05D003924 ORTHO05D005216 7.1e-27 124.0 87 67.8
Lj6g0026487 Lotus japonicus HOM05D003924 ORTHO05D005216 7.1e-27 124.0 86 67.4
Hund16198 Selenicereus undatus HOM05D003924 ORTHO05D005216 7.1e-27 124.0 87 69.0
vmacro17942 Vaccinium macrocarpon HOM05D003924 ORTHO05D005216 7.1e-27 124.0 87 67.8
Atru.chr2.540 Acer truncatum HOM05D003924 ORTHO05D005216 9.2e-27 123.6 87 69.0
CAN.G742.17 Capsicum annuum HOM05D003924 ORTHO05D005216 9.2e-27 123.6 87 71.3
EL10Ac2g04495 Beta vulgaris HOM05D003924 ORTHO05D005216 1.2e-26 123.2 94 62.8
Lj8C94T13 Lonicera japonica HOM05D003924 ORTHO05D005216 1.2e-26 123.2 87 69.0
Solyc04g049770.4 Solanum lycopersicum HOM05D003924 ORTHO05D005216 1.2e-26 123.2 87 70.1
Sopen04g020010 Solanum pennellii HOM05D003924 ORTHO05D005216 1.2e-26 123.2 87 70.1
TAR623G0957 Trochodendron aralioides HOM05D003924 ORTHO05D005216 1.2e-26 123.2 87 66.7
GSVIVG01016353001 Vitis vinifera HOM05D003924 ORTHO05D005216 1.2e-26 123.2 87 67.8
Dinv17348 Davidia involucrata HOM05D003924 ORTHO05D005216 2.1e-26 122.5 87 67.8
HanXRQChr14g0460881 Helianthus annuus HOM05D003924 ORTHO05D005216 2.1e-26 122.5 87 66.7
Medtr2g048630 Medicago truncatula HOM05D003924 ORTHO05D005216 2.1e-26 122.5 92 60.9
SalBow1G8295 Salvia bowleyana HOM05D003924 ORTHO05D005216 2.1e-26 122.5 87 69.0
Cfa001582 Carpinus fangiana HOM05D003924 ORTHO05D005216 2.7e-26 122.1 87 66.7
CiPaw.01G277600 Carya illinoinensis HOM05D003924 ORTHO05D005216 2.7e-26 122.1 87 69.0
Ca_02521_v3 Cicer arietinum L. HOM05D003924 ORTHO05D005216 2.7e-26 122.1 92 62.0
Gorai.010G203700 Gossypium raimondii HOM05D003924 ORTHO05D005216 2.7e-26 122.1 87 66.7
HPP92_017237 Vanilla planifolia HOM05D003924 ORTHO05D005216 2.7e-26 122.1 87 64.4
Duzib106G1600 Durio zibethinus HOM05D003924 ORTHO05D005216 3.5e-26 121.7 87 66.7
Lsat_1_v5_gn_2_116140 Lactuca sativa HOM05D003924 ORTHO05D005216 3.5e-26 121.7 87 65.5
MBI19_g06147_MAGBIO Magnolia biondii HOM05D003924 ORTHO05D005216 3.5e-26 121.7 87 65.5
Peaxi162Scf01024g00324 Petunia axillaris HOM05D003924 ORTHO05D005216 3.5e-26 121.7 86 70.9
TPR.G31980 Trifolium pratense HOM05D003924 ORTHO05D005216 3.5e-26 121.7 92 60.9
Potri.010G216100 Populus trichocarpa HOM05D003924 ORTHO05D005216 4.6e-26 121.3 87 69.0
ECA238G4557 Erigeron canadensis HOM05D003924 ORTHO05D005216 7.8e-26 120.6 87 63.2
Gohir.A06G179002 Gossypium hirsutum HOM05D003924 ORTHO05D005216 7.8e-26 120.6 87 65.5
QL08p057163 Quercus lobata HOM05D003924 ORTHO05D005216 7.8e-26 120.6 86 68.6
Sabra08G0031600 Salix brachista HOM05D003924 ORTHO05D005216 7.8e-26 120.6 87 66.7
Thecc.10G066000 Theobroma cacao HOM05D003924 ORTHO05D005216 7.8e-26 120.6 87 67.8
ClCG09G020390 Citrullus lanatus HOM05D003924 ORTHO05D005216 1.0e-25 120.2 87 65.5
MELO3C025497.2 Cucumis melo HOM05D003924 ORTHO05D005216 1.0e-25 120.2 87 65.5
CsaV3_5G026020 Cucumis sativus L. HOM05D003924 ORTHO05D005216 1.0e-25 120.2 87 65.5
Eucgr.G02792 Eucalyptus grandis HOM05D003924 ORTHO05D005216 1.0e-25 120.2 87 65.5
COL.COLO4_23765 Corchorus olitorius HOM05D003924 ORTHO05D005216 1.3e-25 119.8 87 66.7
Gohir.D06G174100 Gossypium hirsutum HOM05D003924 ORTHO05D005216 1.3e-25 119.8 87 65.5
Potri.008G045400 Populus trichocarpa HOM05D003924 ORTHO05D005216 1.3e-25 119.8 87 66.7
Migut.D01216 Erythranthe guttata HOM05D003924 ORTHO05D005216 2.3e-25 119.0 87 67.8
Nitab4.5_0000561g0080 Nicotiana tabacum HOM05D003924 ORTHO05D005216 2.3e-25 119.0 87 69.0
MSTRG.9355 Avicennia marina HOM05D003924 ORTHO05D005216 3.0e-25 118.6 87 66.7
CSS0019567 Camellia sinensis var. sinensis HOM05D003924 ORTHO05D005216 3.0e-25 118.6 87 65.5
Cc09_g02440 Coffea canephora HOM05D003924 ORTHO05D005216 3.0e-25 118.6 87 66.7
PGR142G3475 Punica granatum HOM05D003924 ORTHO05D005216 3.0e-25 118.6 87 64.4
Oeu033837.1 Olea europaea HOM05D003924 ORTHO05D005216 3.9e-25 118.2 87 66.7
Manes.07G101600 Manihot esculenta HOM05D003924 ORTHO05D005216 5.1e-25 117.9 87 66.7
Sed0000671 Sechium edule HOM05D003924 ORTHO05D005216 5.1e-25 117.9 87 64.4
HanXRQChr03g0077291 Helianthus annuus HOM05D003924 ORTHO05D005216 6.6e-25 117.5 87 63.2
ATR0810G286 Amborella trichopoda HOM05D003924 ORTHO05D005216 8.6e-25 117.1 87 63.2
TWI15G1255 Tripterygium wilfordii HOM05D003924 ORTHO05D005216 8.6e-25 117.1 87 65.5
Actinidia03018 Actinidia chinensis HOM05D003924 ORTHO05D005216 1.1e-24 116.7 87 64.4
PSO339G1038 Papaver somniferum HOM05D003924 ORTHO05D005216 1.5e-24 116.3 87 64.4
PSO384G1475 Papaver somniferum HOM05D003924 ORTHO05D005216 1.5e-24 116.3 87 64.4
Duzib128G0369 Durio zibethinus HOM05D003924 ORTHO05D005216 3.3e-24 115.2 92 62.0
Oeu055052.1 Olea europaea HOM05D003924 ORTHO05D005216 3.3e-24 115.2 87 65.5
CDE01G0014 Ceratophyllum demersum HOM05D003924 ORTHO05D005216 4.3e-24 114.8 87 59.8
HanXRQChr07g0200911 Helianthus annuus HOM05D003924 ORTHO05D005216 4.3e-24 114.8 87 63.2
Zm00001eb185340 Zea mays HOM05D003924 ORTHO05D005216 5.6e-24 114.4 87 58.6
Zm00001eb247890 Zea mays HOM05D003924 ORTHO05D005216 5.6e-24 114.4 87 58.6
C07p14600 Brassica napus HOM05D003924 ORTHO05D020089 9.5e-24 113.6 77 79.2
BolC4t24411H Brassica oleracea HOM05D003924 ORTHO05D020089 3.6e-23 111.7 77 79.2
SMO116G0081 Selaginella moellendorffii HOM05D003924 ORTHO05D005216 8.1e-23 110.5 87 60.9
Duzib114G0370 Durio zibethinus HOM05D003924 ORTHO05D005216 1.4e-22 109.8 94 60.6
Pp3c11_19990 Physcomitrium patens HOM05D003924 ORTHO05D005216 1.4e-22 109.8 87 62.1
unitig_899.g14816 Utricularia gibba HOM05D003924 ORTHO05D005216 1.4e-22 109.8 86 60.5
Sabra10G0167200 Salix brachista HOM05D003924 ORTHO05D005216 3.1e-22 108.6 82 67.1
SEGI_19841 Sequoiadendron giganteum HOM05D003924 ORTHO05D005216 5.2e-22 107.8 87 58.6
SEGI_38774 Sequoiadendron giganteum HOM05D003924 ORTHO05D005216 5.2e-22 107.8 87 58.6
CBR_g19436 Chara braunii HOM05D003924 ORTHO05D005216 8.9e-22 107.1 94 58.5
Haze_16947 Corylus avellana HOM05D003924 ORTHO05D005216 5.8e-21 104.4 122 49.2
Mapoly0202s0011 Marchantia polymorpha HOM05D003924 ORTHO05D005216 2.2e-20 102.4 87 55.2
Rhsim09G0154800 Rhododendron simsii HOM05D003924 ORTHO05D005216 2.2e-20 102.4 96 55.2
Rhsim03G0121700 Rhododendron simsii HOM05D003924 ORTHO05D005216 6.0e-18 94.4 134 43.3
BcaC02g10454 Brassica carinata HOM05D003924 ORTHO05D020089 1.8e-14 82.8 59 74.6
BcaB06g29071 Brassica carinata HOM05D003924 ORTHO05D005216 5.8e-13 77.8 58 70.7
Cre17.g729250 Chlamydomonas reinhardtii HOM05D003924 ORTHO05D005216 2.9e-12 75.5 85 48.2
Sc10g0000900 Simmondsia chinensis HOM05D003924 ORTHO05D005216 7.1e-11 70.9 58 63.8
BolC7t41958H Brassica oleracea HOM05D003924 ORTHO05D020089 1.3e-09 66.6 38 92.1
BraA07t28706Z Brassica rapa HOM05D003924 ORTHO05D020089 2.5e-08 62.4 29 89.7
Psat1g019320 Pisum sativum HOM05D003924 ORTHO05D005216 9.6e-08 60.5 35 62.9
FAN12G0118 Fragaria x ananassa HOM05D003924 ORTHO05D005216 3.6e-07 58.5 29 79.3
MCO07G242 Micromonas commoda HOM05D003924 ORTHO05D005216 2.4e-06 55.8 88 39.8
SHI16913 Sapria himalayana HOM05D000002 ORTHO05D000001 3.1e-06 55.5 77 44.2
BcaC02g07418 Brassica carinata HOM05D003924 ORTHO05D005216 6.9e-06 54.3 45 68.9


User provided reference genes

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