Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p17070 Brassica napus HOM05D004689 ORTHO05D006269 5.9e-131 471.1 231 100.0
BolC4t23259H Brassica oleracea HOM05D004689 ORTHO05D006269 5.9e-131 471.1 231 100.0
A05p13300 Brassica napus HOM05D004689 ORTHO05D006269 7.7e-131 470.7 231 99.6
BraA05t20271Z Brassica rapa HOM05D004689 ORTHO05D006269 7.7e-131 470.7 231 99.6
Sp4g14930 Schrenkiella parvula HOM05D004689 ORTHO05D006269 3.9e-122 441.8 233 92.7
CARHR126450 Cardamine hirsuta HOM05D004689 ORTHO05D006269 5.6e-121 438.0 228 92.5
Thhalv10017051m.g Eutrema salsugineum HOM05D004689 ORTHO05D006269 2.8e-120 435.6 231 90.5
Aa31LG5G4730 Aethionema arabicum HOM05D004689 ORTHO05D006269 1.8e-119 433.0 229 92.1
AT2G32600 Arabidopsis thaliana HOM05D004689 ORTHO05D006269 5.8e-118 427.9 229 90.4
Carub.0004s1393 Capsella rubella HOM05D004689 ORTHO05D006269 1.7e-117 426.4 231 89.6
AL4G28000 Arabidopsis lyrata HOM05D004689 ORTHO05D006269 2.9e-117 425.6 229 90.0
THA.LOC104816037 Tarenaya hassleriana HOM05D004689 ORTHO05D006269 3.7e-117 425.2 229 89.5
arahy.Tifrunner.gnm1.ann1.0YCB9L Arachis hypogaea HOM05D004689 ORTHO05D006269 1.6e-112 409.8 228 87.3
arahy.Tifrunner.gnm1.ann1.98D3Z3 Arachis hypogaea HOM05D004689 ORTHO05D006269 1.6e-112 409.8 228 87.3
Glyma.13G367400 Glycine max HOM05D004689 ORTHO05D006269 4.7e-112 408.3 231 84.8
Glyma.15G005900 Glycine max HOM05D004689 ORTHO05D006269 6.2e-112 407.9 231 84.8
TWI74G0641 Tripterygium wilfordii HOM05D004689 ORTHO05D006269 8.1e-112 407.5 231 84.8
VMungo0917G0001 Vigna mungo HOM05D004689 ORTHO05D006269 8.1e-112 407.5 228 86.4
Peaxi162Scf00407g00631 Petunia axillaris HOM05D004689 ORTHO05D006269 1.1e-111 407.1 228 85.5
Duzib128G1555 Durio zibethinus HOM05D004689 ORTHO05D006269 1.4e-111 406.8 228 86.4
PGSC0003DMG400003874 Solanum tuberosum HOM05D004689 ORTHO05D006269 1.4e-111 406.8 229 85.2
FAN02G2373 Fragaria x ananassa HOM05D004689 ORTHO05D006269 1.8e-111 406.4 228 86.4
FAN14G4883 Fragaria x ananassa HOM05D004689 ORTHO05D006269 1.8e-111 406.4 228 86.4
Lalb_Chr10g0099851 Lupinus albus HOM05D004689 ORTHO05D006269 1.8e-111 406.4 228 86.4
Sed0022535 Sechium edule HOM05D004689 ORTHO05D006269 1.8e-111 406.4 231 85.7
Phvul.005G180000 Phaseolus vulgaris HOM05D004689 ORTHO05D006269 2.3e-111 406.0 228 85.5
GSVIVG01033687001 Vitis vinifera HOM05D004689 ORTHO05D006269 2.3e-111 406.0 228 86.8
CSS0004382 Camellia sinensis var. sinensis HOM05D004689 ORTHO05D006269 5.2e-111 404.8 228 86.0
CSS0024828 Camellia sinensis var. sinensis HOM05D004689 ORTHO05D006269 5.2e-111 404.8 228 86.0
Gohir.D09G140400 Gossypium hirsutum HOM05D004689 ORTHO05D006269 5.2e-111 404.8 228 86.4
Gorai.006G161000 Gossypium raimondii HOM05D004689 ORTHO05D006269 5.2e-111 404.8 228 86.4
TAR633G1835 Trochodendron aralioides HOM05D004689 ORTHO05D006269 5.2e-111 404.8 228 86.4
MSTRG.19190 Avicennia marina HOM05D004689 ORTHO05D006269 8.9e-111 404.1 228 85.1
Ciclev10012150m.g Citrus clementina HOM05D004689 ORTHO05D006269 8.9e-111 404.1 228 86.0
Lalb_Chr04g0254861 Lupinus albus HOM05D004689 ORTHO05D006269 8.9e-111 404.1 228 86.0
SGA_v2.0_scaffold40G15470 Striga asiatica HOM05D004689 ORTHO05D006269 8.9e-111 404.1 231 84.0
Thecc.05G071600 Theobroma cacao HOM05D004689 ORTHO05D006269 8.9e-111 404.1 221 88.7
Thecc.05G071900 Theobroma cacao HOM05D004689 ORTHO05D006269 8.9e-111 404.1 221 88.7
TAR369G0565 Trochodendron aralioides HOM05D004689 ORTHO05D006269 8.9e-111 404.1 228 86.4
CiPaw.10G001700 Carya illinoinensis HOM05D004689 ORTHO05D006269 1.2e-110 403.7 228 85.5
Cfa021476 Carpinus fangiana HOM05D004689 ORTHO05D006269 2.0e-110 402.9 228 85.5
CsaV3_3G036230 Cucumis sativus L. HOM05D004689 ORTHO05D006269 2.0e-110 402.9 231 84.8
QL03p020097 Quercus lobata HOM05D004689 ORTHO05D006269 2.0e-110 402.9 228 86.0
Solyc09g008470.4 Solanum lycopersicum HOM05D004689 ORTHO05D006269 2.0e-110 402.9 229 84.7
CANSAT80G2663 Cannabis sativa HOM05D004689 ORTHO05D006269 2.6e-110 402.5 228 85.1
RcHm_v2.0_Chr3g0470901 Rosa chinensis HOM05D004689 ORTHO05D006269 2.6e-110 402.5 221 88.2
ECA238G3499 Erigeron canadensis HOM05D004689 ORTHO05D006269 3.4e-110 402.1 230 85.7
Sopen09g003300 Solanum pennellii HOM05D004689 ORTHO05D006269 3.4e-110 402.1 229 84.7
Ca_23152_v3 Cicer arietinum L. HOM05D004689 ORTHO05D006269 4.4e-110 401.7 221 86.9
COL.COLO4_26909 Corchorus olitorius HOM05D004689 ORTHO05D006269 4.4e-110 401.7 220 88.6
Gohir.A09G144600 Gossypium hirsutum HOM05D004689 ORTHO05D006269 4.4e-110 401.7 228 86.0
Lsat_1_v5_gn_1_52460 Lactuca sativa HOM05D004689 ORTHO05D006269 4.4e-110 401.7 228 85.5
Potri.006G121300 Populus trichocarpa HOM05D004689 ORTHO05D006269 4.4e-110 401.7 231 83.5
Migut.J00456 Erythranthe guttata HOM05D004689 ORTHO05D006269 5.8e-110 401.4 228 85.1
Ah.15g091430 Amaranthus hybridus HOM05D004689 ORTHO05D006269 9.8e-110 400.6 228 84.6
Medtr8g009970 Medicago truncatula HOM05D004689 ORTHO05D006269 1.3e-109 400.2 221 86.0
Oeu042111.1 Olea europaea HOM05D004689 ORTHO05D006269 1.3e-109 400.2 220 87.3
unitig_26.g9238 Utricularia gibba HOM05D004689 ORTHO05D006269 1.3e-109 400.2 228 84.2
Ah.08g211440 Amaranthus hybridus HOM05D004689 ORTHO05D006269 2.2e-109 399.4 228 84.2
CDE03G0163 Ceratophyllum demersum HOM05D004689 ORTHO05D006269 2.2e-109 399.4 222 86.9
Nn6g35217 Nelumbo nucifera HOM05D004689 ORTHO05D006269 2.2e-109 399.4 222 86.9
Aqoxy2G01650 Aquilegia oxysepala HOM05D004689 ORTHO05D006269 2.9e-109 399.1 220 88.2
DCAR_020804 Daucus carota HOM05D004689 ORTHO05D006269 2.9e-109 399.1 220 86.8
TPR.G17360 Trifolium pratense HOM05D004689 ORTHO05D006269 2.9e-109 399.1 221 86.0
FAN05G0091 Fragaria x ananassa HOM05D004689 ORTHO05D006269 3.7e-109 398.7 237 83.1
FAN05G3347 Fragaria x ananassa HOM05D004689 ORTHO05D006269 3.7e-109 398.7 237 83.1
Nitab4.5_0003314g0100 Nicotiana tabacum HOM05D004689 ORTHO05D006269 3.7e-109 398.7 219 87.2
Potri.016G097600 Populus trichocarpa HOM05D004689 ORTHO05D006269 4.9e-109 398.3 231 82.7
FAN09G4523 Fragaria x ananassa HOM05D004689 ORTHO05D006269 8.3e-109 397.5 240 82.1
CDE06G0795 Ceratophyllum demersum HOM05D004689 ORTHO05D006269 1.1e-108 397.1 222 86.9
HanXRQChr13g0402661 Helianthus annuus HOM05D004689 ORTHO05D006269 1.1e-108 397.1 222 86.0
Atru.chr8.1747 Acer truncatum HOM05D004689 ORTHO05D006269 2.4e-108 396.0 238 82.4
AUR62026953 Chenopodium quinoa HOM05D004689 ORTHO05D006269 2.4e-108 396.0 228 83.8
Prupe.7G125300 Prunus persica HOM05D004689 ORTHO05D006269 2.4e-108 396.0 228 84.6
Eucgr.K02436 Eucalyptus grandis HOM05D004689 ORTHO05D006269 3.2e-108 395.6 221 86.9
Hma1.2p1_0225F.1_g095000 Hydrangea macrophylla HOM05D004689 ORTHO05D006269 3.2e-108 395.6 223 84.8
EL10Ac7g16690 Beta vulgaris HOM05D004689 ORTHO05D006269 4.1e-108 395.2 228 84.2
MELO3C009381.2 Cucumis melo HOM05D004689 ORTHO05D006269 7.1e-108 394.4 240 81.7
Lj3g0015942 Lotus japonicus HOM05D004689 ORTHO05D006269 9.2e-108 394.0 228 82.9
PGR119G0162 Punica granatum HOM05D004689 ORTHO05D006269 1.2e-107 393.7 221 85.5
Sc20g0005690 Simmondsia chinensis HOM05D004689 ORTHO05D006269 1.2e-107 393.7 228 84.2
Hund19382 Selenicereus undatus HOM05D004689 ORTHO05D006269 1.6e-107 393.3 221 86.4
Actinidia32476 Actinidia chinensis HOM05D004689 ORTHO05D006269 3.5e-107 392.1 221 86.0
RcHm_v2.0_Chr7g0191101 Rosa chinensis HOM05D004689 ORTHO05D006269 3.5e-107 392.1 221 86.4
PSO675G8307 Papaver somniferum HOM05D004689 ORTHO05D006269 3.0e-106 389.0 222 84.7
HPP92_017214 Vanilla planifolia HOM05D004689 ORTHO05D006269 3.0e-106 389.0 226 84.5
MD12G1106500 Malus domestica HOM05D004689 ORTHO05D006269 3.9e-106 388.7 221 86.0
PSO541G4270 Papaver somniferum HOM05D004689 ORTHO05D006269 6.6e-106 387.9 222 84.2
Lj3C990G15 Lonicera japonica HOM05D004689 ORTHO05D006269 1.1e-105 387.1 219 85.8
RhsimUnG0004400 Rhododendron simsii HOM05D004689 ORTHO05D006269 5.6e-105 384.8 231 83.1
RhsimUnG0067800 Rhododendron simsii HOM05D004689 ORTHO05D006269 5.6e-105 384.8 231 83.1
ClCG10G019870 Citrullus lanatus HOM05D004689 ORTHO05D006269 1.1e-103 380.6 251 76.5
Cc06_g04560 Coffea canephora HOM05D004689 ORTHO05D006269 1.5e-102 376.7 296 65.9
AagrBONN_evm.TU.Sc2ySwM_344.454 Anthoceros agrestis HOM05D004689 ORTHO05D006269 2.6e-102 375.9 219 83.6
Mapoly0069s0004 Marchantia polymorpha HOM05D004689 ORTHO05D006269 2.6e-102 375.9 219 82.6
Zm00001eb398100 Zea mays HOM05D004689 ORTHO05D006269 7.6e-102 374.4 220 81.8
Pp3c15_8160 Physcomitrium patens HOM05D004689 ORTHO05D006269 2.2e-101 372.9 216 83.3
CBR_g54837 Chara braunii HOM05D004689 ORTHO05D006269 4.9e-101 371.7 212 82.5
MD04G1088800 Malus domestica HOM05D004689 ORTHO05D006269 1.6e-99 366.7 208 87.5
Os03g0263500 Oryza sativa ssp. japonica HOM05D004689 ORTHO05D006269 3.5e-99 365.5 231 76.2
Sabra06G0095500 Salix brachista HOM05D004689 ORTHO05D006269 3.5e-99 365.5 310 61.9
Carub.0007s3257 Capsella rubella HOM05D004689 ORTHO05D006269 3.0e-98 362.5 234 78.6
Pp3c9_13030 Physcomitrium patens HOM05D004689 ORTHO05D006269 2.5e-97 359.4 216 80.6
SMO228G0117 Selaginella moellendorffii HOM05D004689 ORTHO05D006269 7.3e-97 357.8 213 81.7
Zm00001eb011590 Zea mays HOM05D004689 ORTHO05D006269 2.1e-96 356.3 220 79.1
CAN.G1038.16 Capsicum annuum HOM05D004689 ORTHO05D006269 2.0e-86 323.2 185 82.7
AagrBONN_evm.TU.Sc2ySwM_344.3364 Anthoceros agrestis HOM05D004689 ORTHO05D006269 4.4e-86 322.0 181 86.7
MCO12G316 Micromonas commoda HOM05D004689 ORTHO05D006269 2.2e-85 319.7 228 70.6
Psat1g060440 Pisum sativum HOM05D004689 ORTHO05D006269 3.2e-84 315.8 336 52.4
Cre06.g252700 Chlamydomonas reinhardtii HOM05D004689 ORTHO05D006269 2.1e-83 313.2 208 72.6
Prupe.4G071900 Prunus persica HOM05D004689 ORTHO05D006269 1.1e-81 307.4 225 70.7
PRCOL_00004335 Prasinoderma coloniale HOM05D004689 ORTHO05D006269 4.6e-75 285.4 218 63.8
BcaB02g10459 Brassica carinata HOM05D004689 ORTHO05D006269 1.3e-74 283.9 198 77.8
Manes.09G064318 Manihot esculenta HOM05D004689 ORTHO05D006269 1.8e-74 283.5 164 84.1
Cpa.g.sc87.109 Carica papaya HOM05D004689 ORTHO05D006269 3.7e-72 275.8 228 64.0
Haze_26764 Corylus avellana HOM05D004689 ORTHO05D006269 1.3e-69 267.3 189 68.8
vmacro08797 Vaccinium macrocarpon HOM05D004689 ORTHO05D006269 2.2e-69 266.5 557 34.8
Psat6g037120 Pisum sativum HOM05D005082 ORTHO05D006474 3.8e-69 265.8 207 67.1
SHI12393 Sapria himalayana HOM05D004689 ORTHO05D006269 1.1e-68 264.2 243 61.3
FvH4_6g16880 Fragaria vesca HOM05D004689 ORTHO05D006269 4.2e-68 262.3 172 76.2
Dinv37340 Davidia involucrata HOM05D004689 ORTHO05D006269 3.8e-61 239.2 132 87.9
Dinv35815 Davidia involucrata HOM05D004689 ORTHO05D006269 8.5e-61 238.0 147 77.6
AUR62043425 Chenopodium quinoa HOM05D004689 ORTHO05D006269 1.7e-53 213.8 221 53.4
MBI17_g39322_MAGBIO Magnolia biondii HOM05D004689 ORTHO05D006269 2.3e-50 203.4 107 90.7
ATR0118G008 Amborella trichopoda HOM05D004689 ORTHO05D006269 5.1e-50 202.2 108 89.8
VMungo0219G0001 Vigna mungo HOM05D004689 ORTHO05D006269 8.8e-50 201.4 107 90.7
Haze_19437 Corylus avellana HOM05D004689 ORTHO05D006269 2.2e-48 196.8 121 76.9
AUR62043819 Chenopodium quinoa HOM05D004689 ORTHO05D006269 2.0e-46 190.3 108 82.4
TAR636G1083 Trochodendron aralioides HOM05D004689 ORTHO05D006269 2.0e-46 190.3 107 85.0
SEGI_10194 Sequoiadendron giganteum HOM05D004689 ORTHO05D006269 7.7e-46 188.3 121 73.6
Nitab4.5_0000349g0010 Nicotiana tabacum HOM05D004689 ORTHO05D006269 2.9e-45 186.4 106 85.8
Actinidia31313 Actinidia chinensis HOM05D004689 ORTHO05D006269 3.8e-45 186.0 117 76.9
SMO031G0002 Selaginella moellendorffii HOM05D004689 ORTHO05D006269 7.9e-43 178.3 92 91.3
Cc00_g23430 Coffea canephora HOM05D004689 ORTHO05D006269 5.7e-41 172.2 95 88.4
Cc00_g35330 Coffea canephora HOM05D004689 ORTHO05D006269 4.8e-40 169.1 95 87.4
Haze_05755 Corylus avellana HOM05D004689 ORTHO05D006269 2.4e-39 166.8 124 67.7
Nitab4.5_0002373g0090 Nicotiana tabacum HOM05D004689 ORTHO05D006269 1.3e-37 161.0 98 75.5
AagrBONN_evm.TU.Sc2ySwM_344.3466 Anthoceros agrestis HOM05D004689 ORTHO05D006269 3.2e-36 156.4 103 74.8
ATR0118G005 Amborella trichopoda HOM05D004689 ORTHO05D006269 1.0e-34 151.4 87 81.6
MBI17_g39319_MAGBIO Magnolia biondii HOM05D004689 ORTHO05D006269 2.6e-33 146.7 97 73.2
Psat0s2549g0120 Pisum sativum HOM05D004689 ORTHO05D006269 2.4e-31 140.2 77 83.1
Psat1g060480 Pisum sativum HOM05D004689 ORTHO05D006269 2.0e-30 137.1 71 88.7
Psat1g060520 Pisum sativum HOM05D004689 ORTHO05D006269 2.0e-30 137.1 71 88.7
Haze_06063 Corylus avellana HOM05D004689 ORTHO05D023802 6.8e-26 122.1 79 70.9
Nitab4.5_0000349g0040 Nicotiana tabacum HOM05D004689 ORTHO05D006269 7.2e-20 102.1 82 65.9
Psat1g060600 Pisum sativum HOM05D004689 ORTHO05D006269 3.0e-18 96.7 58 75.9
Pp3c4_2800 Physcomitrium patens HOM05D004689 ORTHO05D006269 2.4e-15 87.0 132 46.2
Dinv25427 Davidia involucrata HOM05D004689 ORTHO05D182071 1.5e-09 67.8 38 84.2
Dinv44323 Davidia involucrata HOM05D004689 ORTHO05D183653 2.0e-09 67.4 38 84.2
Psat4g215720 Pisum sativum HOM05D002324 ORTHO05D002380 5.7e-09 65.9 50 68.0
Haze_13658 Corylus avellana HOM05D004689 ORTHO05D023802 9.8e-09 65.1 61 49.2
Dinv29092 Davidia involucrata HOM05D004689 ORTHO05D185927 2.0e-06 57.4 45 60.0


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