Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p06850 Brassica napus HOM05D006496 ORTHO05D008390 1.6e-91 339.3 168 100.0
C02p12140 Brassica napus HOM05D006496 ORTHO05D008390 1.6e-91 339.3 168 100.0
BraA02t05763Z Brassica rapa HOM05D006496 ORTHO05D008390 3.4e-89 331.6 168 97.6
BcaB05g22585 Brassica carinata HOM05D006496 ORTHO05D008390 9.1e-50 200.7 169 65.7
Sp6g21470 Schrenkiella parvula HOM05D006496 ORTHO05D008390 1.7e-32 143.3 171 51.5
AL8G36350 Arabidopsis lyrata HOM05D006496 ORTHO05D008390 9.4e-31 137.5 156 51.9
Thhalv10014093m.g Eutrema salsugineum HOM05D006496 ORTHO05D008390 2.7e-30 136.0 175 50.3
AT5G59800 Arabidopsis thaliana HOM05D006496 ORTHO05D008390 1.0e-29 134.0 150 53.3
BcaC04g19631 Brassica carinata HOM05D006496 ORTHO05D008390 1.4e-29 133.7 162 52.5
A10p17060 Brassica napus HOM05D006496 ORTHO05D008390 1.4e-29 133.7 162 52.5
C09p52290 Brassica napus HOM05D006496 ORTHO05D008390 1.4e-29 133.7 162 52.5
BolC9t58098H Brassica oleracea HOM05D006496 ORTHO05D008390 1.4e-29 133.7 162 52.5
BraA10t43786Z Brassica rapa HOM05D006496 ORTHO05D008390 1.4e-29 133.7 162 52.5
BcaB08g36218 Brassica carinata HOM05D006496 ORTHO05D008390 1.2e-28 130.6 159 51.6
Carub.0008s2046 Capsella rubella HOM05D006496 ORTHO05D008390 2.8e-27 125.9 149 51.7
CARHR273380 Cardamine hirsuta HOM05D006496 ORTHO05D008390 4.8e-27 125.2 158 49.4
THA.LOC104810806 Tarenaya hassleriana HOM05D006496 ORTHO05D008390 2.8e-19 99.4 123 47.2
Aa31sc23G160 Aethionema arabicum HOM05D006496 ORTHO05D008390 4.7e-14 82.0 166 39.8
Duzib168G2252 Durio zibethinus HOM05D006496 ORTHO05D008390 6.1e-14 81.6 137 38.7
BolC3t13791H Brassica oleracea HOM05D006496 ORTHO05D008390 1.0e-13 80.9 124 45.2
C03p13280 Brassica napus HOM05D006496 ORTHO05D008390 1.4e-13 80.5 127 45.7
BraA03t10462Z Brassica rapa HOM05D006496 ORTHO05D008390 4.0e-13 79.0 130 43.8
A03p11480 Brassica napus HOM05D006496 ORTHO05D008390 1.5e-12 77.0 126 46.0
Prupe.6G084300 Prunus persica HOM05D006496 ORTHO05D008390 2.0e-12 76.6 132 36.4
BcaC01g06549 Brassica carinata HOM05D006496 ORTHO05D008390 2.6e-12 76.3 53 71.7
COL.COLO4_18451 Corchorus olitorius HOM05D006496 ORTHO05D008390 9.8e-12 74.3 140 34.3
Ciclev10028859m.g Citrus clementina HOM05D006496 ORTHO05D008390 1.3e-11 73.9 143 36.4
Oeu058535.1 Olea europaea HOM05D006496 ORTHO05D008390 2.9e-11 72.8 152 35.5
Potri.009G027600 Populus trichocarpa HOM05D006496 ORTHO05D008390 3.7e-11 72.4 127 38.6
RcHm_v2.0_Chr5g0062931 Rosa chinensis HOM05D006496 ORTHO05D008390 4.9e-11 72.0 124 37.1
TWI75G0988 Tripterygium wilfordii HOM05D006496 ORTHO05D008390 6.4e-11 71.6 115 40.0
Atru.chr3.3823 Acer truncatum HOM05D006496 ORTHO05D008390 8.3e-11 71.2 131 34.4
QL01p033240 Quercus lobata HOM05D006496 ORTHO05D008390 1.1e-10 70.9 122 36.1
QL01p033291 Quercus lobata HOM05D006496 ORTHO05D008390 1.1e-10 70.9 122 36.1
MD03G1099500 Malus domestica HOM05D006496 ORTHO05D008390 1.8e-10 70.1 128 35.2
Ah.08g218920 Amaranthus hybridus HOM05D006496 ORTHO05D008390 3.2e-10 69.3 129 36.4
Manes.04G031000 Manihot esculenta HOM05D006496 ORTHO05D008390 3.2e-10 69.3 103 40.8
HanXRQChr01g0009831 Helianthus annuus HOM05D006496 ORTHO05D008390 5.4e-10 68.6 126 34.1
FAN16G0777 Fragaria x ananassa HOM05D006496 ORTHO05D008390 7.0e-10 68.2 124 35.5
MD03G1099400 Malus domestica HOM05D006496 ORTHO05D008390 9.2e-10 67.8 160 31.9
Psat5g284080 Pisum sativum HOM05D006496 ORTHO05D008390 1.2e-09 67.4 100 37.0
FAN25G3002 Fragaria x ananassa HOM05D006496 ORTHO05D008390 1.6e-09 67.0 130 36.9
CiPaw.13G099300 Carya illinoinensis HOM05D006496 ORTHO05D008390 3.5e-09 65.9 119 36.1
RcHm_v2.0_Chr5g0062921 Rosa chinensis HOM05D006496 ORTHO05D008390 3.5e-09 65.9 105 41.0
Solyc11g073080.3 Solanum lycopersicum HOM05D006496 ORTHO05D008390 3.5e-09 65.9 148 33.8
FvH4_3g35002 Fragaria vesca HOM05D006496 ORTHO05D008390 5.9e-09 65.1 130 36.9
FAN11G2800 Fragaria x ananassa HOM05D006496 ORTHO05D008390 5.9e-09 65.1 130 36.9
Nitab4.5_0003498g0030 Nicotiana tabacum HOM05D006496 ORTHO05D008390 7.8e-09 64.7 138 35.5
Sopen11g030740 Solanum pennellii HOM05D006496 ORTHO05D008390 1.3e-08 63.9 148 33.8
Prupe.6G084200 Prunus persica HOM05D006496 ORTHO05D008390 1.7e-08 63.5 129 37.2
FvH4_3g35010 Fragaria vesca HOM05D006496 ORTHO05D008390 2.3e-08 63.2 135 34.8
Migut.D02127 Erythranthe guttata HOM05D006496 ORTHO05D008390 3.9e-08 62.4 145 33.8
Hma1.2p1_0035F.1_g022050 Hydrangea macrophylla HOM05D006496 ORTHO05D008390 3.9e-08 62.4 147 34.0
FAN16G2573 Fragaria x ananassa HOM05D006496 ORTHO05D008390 6.6e-08 61.6 117 36.8
FAN21G2388 Fragaria x ananassa HOM05D006496 ORTHO05D008390 6.6e-08 61.6 117 37.6
HanXRQChr01g0009851 Helianthus annuus HOM05D006496 ORTHO05D008390 6.6e-08 61.6 118 35.6
Thecc.09G327500 Theobroma cacao HOM05D006496 ORTHO05D008390 8.6e-08 61.2 114 36.8
CAN.G420.5 Capsicum annuum HOM05D006496 ORTHO05D008390 1.9e-07 60.1 133 36.1
Phvul.004G007200 Phaseolus vulgaris HOM05D006496 ORTHO05D008390 1.9e-07 60.1 123 31.7
AUR62001835 Chenopodium quinoa HOM05D006496 ORTHO05D008390 3.3e-07 59.3 170 31.2
Phvul.L002943 Phaseolus vulgaris HOM05D006496 ORTHO05D008390 7.3e-07 58.2 82 42.7
CSS0042381 Camellia sinensis var. sinensis HOM05D006496 ORTHO05D008390 1.2e-06 57.4 53 52.8
DCAR_015607 Daucus carota HOM05D006496 ORTHO05D008390 1.2e-06 57.4 45 60.0
Medtr2g096520 Medicago truncatula HOM05D006496 ORTHO05D008390 1.2e-06 57.4 48 52.1
TPR.G34315 Trifolium pratense HOM05D006496 ORTHO05D008390 1.2e-06 57.4 45 53.3
FAN11G0827 Fragaria x ananassa HOM05D006496 ORTHO05D008390 2.1e-06 56.6 159 30.2
Actinidia37238 Actinidia chinensis HOM05D006496 ORTHO05D008390 2.8e-06 56.2 58 50.0
arahy.Tifrunner.gnm1.ann1.4RYS79 Arachis hypogaea HOM05D006496 ORTHO05D008390 2.8e-06 56.2 44 54.5
arahy.Tifrunner.gnm1.ann1.7PT1R0 Arachis hypogaea HOM05D006496 ORTHO05D008390 2.8e-06 56.2 44 54.5
Cc01_g12300 Coffea canephora HOM05D006496 ORTHO05D008390 2.8e-06 56.2 45 60.0
Medtr4g008590 Medicago truncatula HOM05D006496 ORTHO05D008390 2.8e-06 56.2 45 53.3
vmacro03111 Vaccinium macrocarpon HOM05D006496 ORTHO05D008390 2.8e-06 56.2 60 50.0
HanXRQChr04g0106921 Helianthus annuus HOM05D006496 ORTHO05D008390 3.6e-06 55.8 59 50.8
Actinidia07064 Actinidia chinensis HOM05D006496 ORTHO05D008390 4.7e-06 55.5 47 59.6
Dinv06145 Davidia involucrata HOM05D006496 ORTHO05D008390 4.7e-06 55.5 44 59.1
Glyma.07G118700 Glycine max HOM05D006496 ORTHO05D008390 4.7e-06 55.5 59 44.1
Lalb_Chr22g0349991 Lupinus albus HOM05D006496 ORTHO05D008390 4.7e-06 55.5 47 51.1
Lsat_1_v5_gn_9_22140 Lactuca sativa HOM05D006496 ORTHO05D008390 8.0e-06 54.7 55 52.7


User provided reference genes

Program Settings