Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 3.9e-78 294.7 142 100.0
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 6.2e-76 287.3 138 99.3
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 4.0e-75 284.6 138 98.6
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 4.5e-74 281.2 138 97.1
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 4.5e-74 281.2 138 97.1
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 1.8e-70 269.2 139 92.1
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 1.1e-69 266.5 138 89.9
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 4.3e-69 264.6 138 88.4
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 1.3e-68 263.1 138 88.4
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 1.5e-66 256.1 138 87.0
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 2.9e-65 251.9 136 86.8
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 8.2e-60 233.8 128 82.8
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 1.7e-57 226.1 138 74.6
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 1.5e-53 213.0 137 70.1
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 5.7e-53 211.1 135 70.4
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 5.7e-53 211.1 135 70.4
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 7.4e-53 210.7 157 66.9
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 1.3e-52 209.9 135 71.1
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 1.6e-52 209.5 138 66.7
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 3.7e-52 208.4 134 69.4
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 4.8e-52 208.0 135 69.6
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 6.3e-52 207.6 133 69.9
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 6.3e-52 207.6 140 67.9
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 8.2e-52 207.2 134 68.7
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 8.2e-52 207.2 134 69.4
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 8.2e-52 207.2 131 69.5
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 8.2e-52 207.2 131 69.5
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 1.1e-51 206.8 134 69.4
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 1.4e-51 206.5 134 68.7
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 1.4e-51 206.5 135 71.1
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 2.4e-51 205.7 139 67.6
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 2.4e-51 205.7 140 69.3
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 2.4e-51 205.7 140 67.1
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 2.4e-51 205.7 137 69.3
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 2.4e-51 205.7 140 67.9
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 4.1e-51 204.9 135 68.9
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 4.1e-51 204.9 134 68.7
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 1.2e-50 203.4 131 69.5
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 1.2e-50 203.4 138 65.9
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 2.6e-50 202.2 135 69.6
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 3.4e-50 201.8 138 66.7
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 7.7e-50 200.7 136 68.4
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 1.3e-49 199.9 135 68.1
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 1.7e-49 199.5 141 65.2
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 2.9e-49 198.7 138 65.2
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 3.8e-49 198.4 138 65.9
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 3.8e-49 198.4 138 65.9
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 5.0e-49 198.0 140 66.4
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 6.5e-49 197.6 138 68.1
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 8.5e-49 197.2 136 66.2
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 8.5e-49 197.2 144 61.8
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 1.1e-48 196.8 132 68.2
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 1.1e-48 196.8 144 61.8
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 1.4e-48 196.4 137 65.0
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 2.5e-48 195.7 137 65.0
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 3.2e-48 195.3 138 65.9
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 3.2e-48 195.3 136 66.9
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 4.2e-48 194.9 132 65.9
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 7.2e-48 194.1 140 64.3
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 1.6e-47 193.0 147 61.9
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 2.1e-47 192.6 131 64.9
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 2.1e-47 192.6 131 65.6
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 4.6e-47 191.4 119 70.6
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 4.6e-47 191.4 135 63.7
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 1.0e-46 190.3 134 65.7
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 1.0e-46 190.3 134 64.2
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 1.4e-46 189.9 131 62.6
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.4e-46 189.9 131 62.6
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 1.4e-46 189.9 142 62.0
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 6.7e-46 187.6 138 65.2
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 8.8e-46 187.2 141 62.4
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 1.1e-45 186.8 156 57.7
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 1.1e-45 186.8 140 60.7
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 2.0e-45 186.0 132 61.4
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 2.6e-45 185.7 134 63.4
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 3.3e-45 185.3 132 64.4
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 4.4e-45 184.9 137 65.0
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 4.4e-45 184.9 131 61.1
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 5.7e-45 184.5 135 62.2
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 1.3e-44 183.3 153 60.8
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 2.2e-44 182.6 135 60.7
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 6.3e-44 181.0 136 61.8
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 3.1e-43 178.7 136 61.0
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 4.1e-43 178.3 140 58.6
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 6.9e-43 177.6 134 61.9
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 3.4e-42 175.3 143 61.5
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 2.9e-41 172.2 138 55.1
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 1.4e-40 169.9 137 56.2
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 2.5e-40 169.1 137 56.2
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 2.1e-39 166.0 142 57.7
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 7.9e-39 164.1 140 52.9
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 1.0e-38 163.7 138 59.4
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 1.4e-38 163.3 226 39.4
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 8.8e-38 160.6 139 54.7
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 8.2e-36 154.1 134 57.5
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 1.1e-35 153.7 140 52.1
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 1.4e-35 153.3 135 53.3
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 2.6e-34 149.1 141 53.9
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 3.5e-34 148.7 100 70.0
Ciclev10029925m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.1e-27 127.1 135 48.1
TPR.G27195 Trifolium pratense HOM05D006635 ORTHO05D008047 9.1e-27 124.0 92 57.6
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 3.5e-26 122.1 97 59.8
C01p40970 Brassica napus HOM05D006635 ORTHO05D008047 1.7e-25 119.8 56 100.0
PGR083G1020 Punica granatum HOM05D006635 ORTHO05D008047 8.5e-25 117.5 143 46.9
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 1.8e-22 109.8 134 38.8
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 2.2e-20 102.8 137 41.6
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 3.1e-19 99.0 125 36.8
SEGI_11171 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 6.5e-17 91.3 88 48.9
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 1.9e-16 89.7 140 36.4
AUR62015462 Chenopodium quinoa HOM05D006635 ORTHO05D008047 2.2e-12 76.3 43 76.7
MBI19_g44428_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 7.3e-08 61.2 76 46.1
Pp3c13_7410 Physcomitrium patens HOM05D000160 ORTHO05D000496 1.6e-07 60.1 131 30.5
Pp3c3_5070 Physcomitrium patens HOM05D000160 ORTHO05D000496 1.0e-06 57.4 112 27.7
unitig_747.g21677 Utricularia gibba HOM05D006635 ORTHO05D008047 4.0e-06 55.5 51 47.1
BcaC05g27974 Brassica carinata HOM05D006635 ORTHO05D008047 6.8e-06 54.7 32 75.0


User provided reference genes

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