Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p30760 Brassica napus HOM05D001849 ORTHO05D042635 2.9e-73 278.5 141 100.0
BolC1t03009H Brassica oleracea HOM05D000250 ORTHO05D042635 6.2e-44 181.0 92 96.7
AL3G26350 Arabidopsis lyrata HOM05D001849 ORTHO05D004689 1.3e-09 67.0 171 35.1
Carub.0003s1373 Capsella rubella HOM05D001849 ORTHO05D004689 1.3e-09 67.0 171 35.1
Thhalv10019957m.g Eutrema salsugineum HOM05D001849 ORTHO05D004689 1.3e-09 67.0 171 35.1
C01p50480 Brassica napus HOM05D001849 ORTHO05D004689 3.8e-09 65.5 38 86.8
BolC1t05000H Brassica oleracea HOM05D001849 ORTHO05D004689 3.8e-09 65.5 38 86.8
BraA01t03995Z Brassica rapa HOM05D001849 ORTHO05D004689 3.8e-09 65.5 38 86.8
AT3G14120 Arabidopsis thaliana HOM05D001849 ORTHO05D004689 1.1e-08 63.9 171 34.5
BcaC05g29121 Brassica carinata HOM05D001849 ORTHO05D004689 1.1e-08 63.9 42 78.6
A05p35330 Brassica napus HOM05D001849 ORTHO05D004689 1.1e-08 63.9 42 78.6
C05p53520 Brassica napus HOM05D001849 ORTHO05D004689 1.1e-08 63.9 42 78.6
BolC5t34029H Brassica oleracea HOM05D001849 ORTHO05D004689 1.1e-08 63.9 42 78.6
BraA05t22343Z Brassica rapa HOM05D001849 ORTHO05D004689 1.1e-08 63.9 42 78.6
Ciclev10027090m.g Citrus clementina HOM05D001849 ORTHO05D004689 1.1e-08 63.9 171 33.3
Aa31LG8G1350 Aethionema arabicum HOM05D001849 ORTHO05D004689 1.5e-08 63.5 171 33.9
CARHR088980 Cardamine hirsuta HOM05D001849 ORTHO05D004689 1.9e-08 63.2 171 33.9
Sp3g12380 Schrenkiella parvula HOM05D001849 ORTHO05D004689 2.5e-08 62.8 171 33.9
Duzib192G0006 Durio zibethinus HOM05D001849 ORTHO05D004689 4.2e-08 62.0 92 44.6
Cpa.g.sc169.28 Carica papaya HOM05D001849 ORTHO05D004689 9.4e-08 60.8 92 42.4
Thecc.06G124800 Theobroma cacao HOM05D001849 ORTHO05D004689 1.6e-07 60.1 92 43.5
TPR.G29992 Trifolium pratense HOM05D001849 ORTHO05D004689 1.6e-07 60.1 37 81.1
Lj3g0004011 Lotus japonicus HOM05D001849 ORTHO05D004689 2.1e-07 59.7 92 45.7
Gohir.D09G079550 Gossypium hirsutum HOM05D001849 ORTHO05D004689 4.7e-07 58.5 96 41.7
Gorai.006G094800 Gossypium raimondii HOM05D001849 ORTHO05D004689 4.7e-07 58.5 96 41.7
Phvul.010G127100 Phaseolus vulgaris HOM05D001849 ORTHO05D004689 4.7e-07 58.5 41 73.2
QL05p003662 Quercus lobata HOM05D001849 ORTHO05D004689 4.7e-07 58.5 92 43.5
VMungo0331G1611 Vigna mungo HOM05D001849 ORTHO05D004689 4.7e-07 58.5 41 73.2
Glyma.07G042000 Glycine max HOM05D001849 ORTHO05D004689 8.0e-07 57.8 37 75.7
Cfa003503 Carpinus fangiana HOM05D001849 ORTHO05D004689 1.0e-06 57.4 92 43.5
Gohir.A09G079900 Gossypium hirsutum HOM05D001849 ORTHO05D004689 1.0e-06 57.4 96 40.6
Psat4g166880 Pisum sativum HOM05D001849 ORTHO05D004689 1.0e-06 57.4 92 43.5
Haze_16076 Corylus avellana HOM05D001849 ORTHO05D004689 1.4e-06 57.0 92 43.5
Manes.11G016400 Manihot esculenta HOM05D001849 ORTHO05D004689 1.4e-06 57.0 171 32.2
CiPaw.01G216000 Carya illinoinensis HOM05D001849 ORTHO05D004689 1.8e-06 56.6 92 42.4
Lalb_Chr10g0101321 Lupinus albus HOM05D001849 ORTHO05D004689 2.3e-06 56.2 41 70.7
Potri.001G165900 Populus trichocarpa HOM05D001849 ORTHO05D004689 2.3e-06 56.2 92 40.2
Sabra01G0127400 Salix brachista HOM05D001849 ORTHO05D004689 2.3e-06 56.2 37 75.7
Eucgr.K02038 Eucalyptus grandis HOM05D001849 ORTHO05D004689 3.0e-06 55.8 92 41.3
Lj9C535G6 Lonicera japonica HOM05D001849 ORTHO05D004689 3.0e-06 55.8 92 41.3
SalBow7G1889 Salvia bowleyana HOM05D001849 ORTHO05D004689 3.0e-06 55.8 51 56.9
CDE07G1134 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 5.2e-06 55.1 100 42.0
AUR62001443 Chenopodium quinoa HOM05D001849 ORTHO05D004689 5.2e-06 55.1 92 38.0
AUR62009922 Chenopodium quinoa HOM05D001849 ORTHO05D004689 5.2e-06 55.1 92 38.0
HanXRQChr09g0277131 Helianthus annuus HOM05D001849 ORTHO05D004689 5.2e-06 55.1 42 64.3
Medtr8g022010 Medicago truncatula HOM05D001849 ORTHO05D004689 5.2e-06 55.1 37 73.0
THA.LOC104822664 Tarenaya hassleriana HOM05D001849 ORTHO05D004689 5.2e-06 55.1 37 78.4
CSS0003623 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 6.7e-06 54.7 37 73.0
CSS0036951 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 6.7e-06 54.7 37 73.0
CSS0050059 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 6.7e-06 54.7 37 73.0
Duzib235G0671 Durio zibethinus HOM05D001849 ORTHO05D004689 8.8e-06 54.3 96 40.6


User provided reference genes

Program Settings