Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung06574 Brassica carinata HOM05D006543 ORTHO05D008308 6.9e-284 979.9 483 100.0
BolC9t53839H Brassica oleracea HOM05D006543 ORTHO05D008308 2.7e-280 968.0 483 99.0
C09p09260 Brassica napus HOM05D006543 ORTHO05D008308 1.4e-273 945.7 483 97.1
A09p08200 Brassica napus HOM05D006543 ORTHO05D008308 5.1e-263 910.6 485 94.2
BraA09t36471Z Brassica rapa HOM05D006543 ORTHO05D008308 1.1e-262 909.4 485 94.0
Thhalv10004112m.g Eutrema salsugineum HOM05D006543 ORTHO05D008308 9.7e-254 879.8 483 88.6
Sp2g26410 Schrenkiella parvula HOM05D006543 ORTHO05D008308 8.5e-250 866.7 483 87.2
AL8G40370 Arabidopsis lyrata HOM05D006543 ORTHO05D008308 4.2e-249 864.4 485 87.4
AT5G63290 Arabidopsis thaliana HOM05D006543 ORTHO05D008308 2.3e-247 858.6 485 86.6
Carub.0008s2404 Capsella rubella HOM05D006543 ORTHO05D008308 1.1e-244 849.7 484 86.0
Aa31LG1G18710 Aethionema arabicum HOM05D006543 ORTHO05D008308 3.6e-240 834.7 483 83.9
THA.LOC104818195 Tarenaya hassleriana HOM05D006543 ORTHO05D008308 1.7e-226 789.3 487 79.7
Hma1.2p1_0046F.1_g027560 Hydrangea macrophylla HOM05D006543 ORTHO05D008308 7.8e-187 657.5 486 66.3
CiPaw.11G012100 Carya illinoinensis HOM05D006543 ORTHO05D008308 1.1e-185 653.7 486 65.4
TWI14G0972 Tripterygium wilfordii HOM05D006543 ORTHO05D008308 1.9e-185 652.9 483 65.6
HanXRQChr05g0154751 Helianthus annuus HOM05D006543 ORTHO05D008308 4.7e-184 648.3 493 64.7
Thecc.03G122600 Theobroma cacao HOM05D006543 ORTHO05D008308 8.1e-184 647.5 483 63.6
Actinidia37252 Actinidia chinensis HOM05D006543 ORTHO05D008308 2.3e-183 646.0 486 66.9
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 5.2e-183 644.8 480 66.5
FvH4_5g07331 Fragaria vesca HOM05D006543 ORTHO05D008308 1.2e-182 643.7 483 66.5
QL10p005246 Quercus lobata HOM05D006543 ORTHO05D008308 3.4e-182 642.1 488 66.2
Oeu045480.1 Olea europaea HOM05D006543 ORTHO05D008308 9.9e-182 640.6 492 64.6
Duzib068G0092 Durio zibethinus HOM05D006543 ORTHO05D008308 1.3e-181 640.2 483 63.1
Lsat_1_v5_gn_5_13221 Lactuca sativa HOM05D006543 ORTHO05D008308 3.7e-181 638.6 488 64.5
RcHm_v2.0_Chr7g0191211 Rosa chinensis HOM05D006543 ORTHO05D008308 3.7e-181 638.6 483 65.8
Lj5A100T59 Lonicera japonica HOM05D006543 ORTHO05D008308 6.4e-181 637.9 483 64.4
CSS0036636 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 8.3e-181 637.5 486 64.4
Hund18538 Selenicereus undatus HOM05D006543 ORTHO05D008308 1.9e-180 636.3 484 64.5
Atru.chr9.1008 Acer truncatum HOM05D006543 ORTHO05D008308 5.4e-180 634.8 484 64.5
Ciclev10020014m.g Citrus clementina HOM05D006543 ORTHO05D008308 9.2e-180 634.0 482 64.5
AUR62025730 Chenopodium quinoa HOM05D006543 ORTHO05D008308 1.6e-179 633.3 483 64.0
Prupe.5G157200 Prunus persica HOM05D006543 ORTHO05D008308 2.1e-179 632.9 483 64.6
COL.COLO4_09265 Corchorus olitorius HOM05D006543 ORTHO05D008308 3.5e-179 632.1 487 62.0
CANSAT80G2173 Cannabis sativa HOM05D006543 ORTHO05D008308 3.0e-178 629.0 486 64.6
AUR62001276 Chenopodium quinoa HOM05D006543 ORTHO05D008308 8.6e-178 627.5 484 63.8
PGSC0003DMG400015239 Solanum tuberosum HOM05D006543 ORTHO05D008308 8.6e-178 627.5 483 62.7
MSTRG.11294 Avicennia marina HOM05D006543 ORTHO05D008308 1.9e-177 626.3 487 64.3
Rhsim12G0172000 Rhododendron simsii HOM05D006543 ORTHO05D008308 5.6e-177 624.8 488 64.8
vmacro16708 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 5.6e-177 624.8 490 64.7
Nitab4.5_0004750g0040 Nicotiana tabacum HOM05D006543 ORTHO05D008308 7.3e-177 624.4 483 62.3
Sopen03g030490 Solanum pennellii HOM05D006543 ORTHO05D008308 7.3e-177 624.4 483 62.3
Manes.06G115100 Manihot esculenta HOM05D006543 ORTHO05D008308 9.5e-177 624.0 492 62.8
Gohir.A09G244900 Gossypium hirsutum HOM05D006543 ORTHO05D008308 1.6e-176 623.2 483 61.9
Sabra12G0067500 Salix brachista HOM05D006543 ORTHO05D008308 2.1e-176 622.9 491 63.3
ECA246G2708 Erigeron canadensis HOM05D006543 ORTHO05D008308 2.8e-176 622.5 464 65.7
TAR374G1424 Trochodendron aralioides HOM05D006543 ORTHO05D008308 1.1e-175 620.5 486 63.4
Potri.012G092900 Populus trichocarpa HOM05D006543 ORTHO05D008308 1.4e-175 620.2 498 62.0
MD14G1163800 Malus domestica HOM05D006543 ORTHO05D008308 3.1e-175 619.0 488 63.7
Solyc03g111360.3 Solanum lycopersicum HOM05D006543 ORTHO05D008308 5.2e-175 618.2 483 61.7
Gorai.006G270300 Gossypium raimondii HOM05D006543 ORTHO05D008308 2.0e-174 616.3 481 61.1
Nitab4.5_0003282g0090 Nicotiana tabacum HOM05D006543 ORTHO05D008308 2.0e-174 616.3 483 62.1
CAN.G352.10 Capsicum annuum HOM05D006543 ORTHO05D008308 2.2e-173 612.8 485 61.9
Cc04_g10340 Coffea canephora HOM05D006543 ORTHO05D008308 8.4e-173 610.9 482 63.3
MBI06_g38704_MAGBIO Magnolia biondii HOM05D006543 ORTHO05D008308 7.1e-172 607.8 490 63.3
Peaxi162Scf00089g00625 Petunia axillaris HOM05D006543 ORTHO05D008308 1.6e-171 606.7 480 61.9
EL10Ac7g18072 Beta vulgaris HOM05D006543 ORTHO05D008308 2.1e-171 606.3 483 62.3
Migut.I00467 Erythranthe guttata HOM05D006543 ORTHO05D008308 4.6e-171 605.1 499 63.1
PGR044G1877 Punica granatum HOM05D006543 ORTHO05D008308 1.3e-170 603.6 489 61.3
Aqoxy5G03584 Aquilegia oxysepala HOM05D006543 ORTHO05D008308 2.3e-170 602.8 492 60.0
arahy.Tifrunner.gnm1.ann1.8LT8QW Arachis hypogaea HOM05D006543 ORTHO05D008308 1.1e-169 600.5 480 61.5
Sed0023544 Sechium edule HOM05D006543 ORTHO05D008308 1.1e-169 600.5 483 61.5
MELO3C026233.2 Cucumis melo HOM05D006543 ORTHO05D008308 1.6e-168 596.7 448 64.3
GSVIVG01007545001 Vitis vinifera HOM05D006543 ORTHO05D008308 1.6e-168 596.7 486 62.1
arahy.Tifrunner.gnm1.ann1.YD5AXN Arachis hypogaea HOM05D006543 ORTHO05D008308 4.7e-168 595.1 481 61.1
Glyma.04G192800 Glycine max HOM05D006543 ORTHO05D008308 1.1e-167 594.0 485 60.8
Phvul.009G169000 Phaseolus vulgaris HOM05D006543 ORTHO05D008308 1.4e-167 593.6 483 61.5
CsaV3_1G000810 Cucumis sativus L. HOM05D006543 ORTHO05D008308 4.0e-167 592.0 448 64.3
Lalb_Chr08g0236931 Lupinus albus HOM05D006543 ORTHO05D008308 9.9e-166 587.4 484 59.3
Lj1g0002208 Lotus japonicus HOM05D006543 ORTHO05D008308 1.6e-163 580.1 483 59.8
Medtr3g075110 Medicago truncatula HOM05D006543 ORTHO05D008308 2.7e-163 579.3 485 60.0
Psat5g141840 Pisum sativum HOM05D006543 ORTHO05D008308 2.7e-163 579.3 484 59.3
TPR.G24245 Trifolium pratense HOM05D006543 ORTHO05D008308 6.0e-163 578.2 483 60.2
ClCG06G017630 Citrullus lanatus HOM05D006543 ORTHO05D008308 7.3e-161 571.2 483 59.6
Lsat_1_v5_gn_4_53181 Lactuca sativa HOM05D006543 ORTHO05D008308 4.2e-156 555.4 502 57.6
Sc04g0000970 Simmondsia chinensis HOM05D006543 ORTHO05D008308 1.6e-155 553.5 483 58.0
Zm00001eb001600 Zea mays HOM05D006543 ORTHO05D008308 1.0e-154 550.8 462 59.5
PSO729G0022 Papaver somniferum HOM05D006543 ORTHO05D008308 2.3e-154 549.7 483 58.2
SGA_v2.0_scaffold338G49246 Striga asiatica HOM05D006543 ORTHO05D008308 1.1e-153 547.4 447 61.5
Ah.15g095320 Amaranthus hybridus HOM05D006543 ORTHO05D008308 9.6e-153 544.3 483 57.8
Os12g0270100 Oryza sativa ssp. japonica HOM05D006543 ORTHO05D008308 6.9e-151 538.1 430 60.7
CDE04G0939 Ceratophyllum demersum HOM05D006543 ORTHO05D008308 5.8e-150 535.0 489 56.9
Gohir.D09G245800 Gossypium hirsutum HOM05D006543 ORTHO05D008308 2.0e-142 510.0 375 64.0
BcaB04g19911 Brassica carinata HOM05D006543 ORTHO05D008308 3.8e-141 505.8 273 93.0
unitig_22.g5878 Utricularia gibba HOM05D006543 ORTHO05D008308 9.7e-137 491.1 386 59.3
SEGI_06622 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 3.1e-135 486.1 464 51.9
Dinv11106 Davidia involucrata HOM05D006543 ORTHO05D008308 3.4e-134 482.6 320 72.2
FvH4_5g07462 Fragaria vesca HOM05D006543 ORTHO05D008308 5.5e-132 475.3 381 63.0
Ca_16091_v3 Cicer arietinum L. HOM05D006543 ORTHO05D008308 2.2e-128 463.4 339 65.8
CARHR277150 Cardamine hirsuta HOM05D006543 ORTHO05D008308 3.1e-127 459.5 274 82.8
VMungo1309G1872 Vigna mungo HOM05D006543 ORTHO05D008308 9.1e-127 458.0 317 67.5
Pp3c13_23570 Physcomitrium patens HOM05D006543 ORTHO05D008308 9.4e-124 448.0 469 48.4
Mapoly0005s0190 Marchantia polymorpha HOM05D006543 ORTHO05D008308 4.2e-116 422.5 492 43.3
CARHR277160 Cardamine hirsuta HOM05D006543 ORTHO05D008308 9.1e-111 404.8 218 88.5
SMO364G0036 Selaginella moellendorffii HOM05D006543 ORTHO05D008308 2.5e-108 396.7 439 46.9
PRCOL_00001606 Prasinoderma coloniale HOM05D006543 ORTHO05D008308 1.4e-98 364.4 447 44.1
BcaB01g05367 Brassica carinata HOM05D006543 ORTHO05D008308 3.0e-98 363.2 236 80.5
CBR_g58805 Chara braunii HOM05D006543 ORTHO05D008308 4.1e-95 352.8 421 43.5
vmacro23154 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 5.4e-95 352.4 256 65.6
ATR0733G153 Amborella trichopoda HOM05D006543 ORTHO05D008308 1.0e-93 348.2 363 50.1
Cre03.g171461 Chlamydomonas reinhardtii HOM05D006543 ORTHO05D008308 6.8e-90 335.5 393 43.8
Nn3g16581 Nelumbo nucifera HOM05D006543 ORTHO05D008308 1.3e-88 331.3 267 62.5
AagrBONN_evm.TU.Sc2ySwM_344.2040 Anthoceros agrestis HOM05D006543 ORTHO05D008308 2.4e-87 327.0 396 42.7
CSS0033277 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 7.0e-87 325.5 300 55.3
Glyma.06G173133 Glycine max HOM05D006543 ORTHO05D008308 3.6e-83 313.2 240 60.4
MCO01G029 Micromonas commoda HOM05D006543 ORTHO05D008308 1.4e-82 311.2 460 40.9
vmacro16659 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 3.4e-81 306.6 320 52.5
Actinidia36787 Actinidia chinensis HOM05D006543 ORTHO05D008308 5.6e-68 262.7 251 54.6
MD06G1157200 Malus domestica HOM05D006543 ORTHO05D008308 2.1e-62 244.2 202 64.9
SEGI_28812 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 3.8e-56 223.4 179 59.8
Oeu045471.1 Olea europaea HOM05D006543 ORTHO05D008308 3.2e-47 193.7 128 72.7
Oeu037566.1 Olea europaea HOM05D006543 ORTHO05D008308 4.2e-47 193.4 128 73.4
Glyma.06G173067 Glycine max HOM05D006543 ORTHO05D008308 1.2e-46 191.8 196 54.1
CAN.G352.9 Capsicum annuum HOM05D006543 ORTHO05D003127 1.9e-39 167.9 116 72.4
FvH4_5g07400 Fragaria vesca HOM05D006543 ORTHO05D008308 5.1e-29 133.3 108 63.9
CAN.G352.8 Capsicum annuum HOM05D006543 ORTHO05D008308 3.4e-25 120.6 100 53.0
MD06G1156000 Malus domestica HOM05D006543 ORTHO05D008308 7.6e-25 119.4 116 51.7
C09p09270 Brassica napus HOM05D039327 ORTHO05D041005 4.3e-20 103.6 53 96.2
BolC9t53840H Brassica oleracea HOM05D039327 ORTHO05D041005 4.3e-20 103.6 53 96.2
BcaNung00695 Brassica carinata HOM05D000342 ORTHO05D000217 5.3e-10 70.1 33 100.0
Cfa009975 Carpinus fangiana HOM05D006543 ORTHO05D008308 7.2e-07 59.7 44 59.1


User provided reference genes

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