Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung04718 Brassica carinata HOM05D004256 ORTHO05D005224 4.5e-200 701.0 353 100.0
BraA01t01177Z Brassica rapa HOM05D004256 ORTHO05D005224 7.3e-150 534.3 328 83.5
C01p14740 Brassica napus HOM05D004256 ORTHO05D005224 2.3e-148 529.3 326 82.2
BcaC09g51292 Brassica carinata HOM05D004256 ORTHO05D005224 1.5e-147 526.6 326 81.9
BolC1t01427H Brassica oleracea HOM05D004256 ORTHO05D005224 1.9e-145 519.6 327 82.6
AL7G33230 Arabidopsis lyrata HOM05D004256 ORTHO05D005224 2.3e-132 476.1 340 73.2
AT4G20920 Arabidopsis thaliana HOM05D004256 ORTHO05D005224 9.2e-129 464.2 341 71.6
BraA01t01178Z Brassica rapa HOM05D004256 ORTHO05D005224 1.3e-127 460.3 348 68.1
A01p12320 Brassica napus HOM05D004256 ORTHO05D005224 1.1e-126 457.2 347 68.3
BcaC09g51291 Brassica carinata HOM05D004256 ORTHO05D005224 2.5e-126 456.1 345 69.3
C01p14750 Brassica napus HOM05D004256 ORTHO05D005224 6.2e-125 451.4 346 69.1
CARHR227480 Cardamine hirsuta HOM05D004256 ORTHO05D005224 7.1e-121 438.0 350 67.7
BolC1t01428H Brassica oleracea HOM05D004256 ORTHO05D005224 2.1e-120 436.4 348 67.5
Thhalv10024347m.g Eutrema salsugineum HOM05D004256 ORTHO05D005224 5.6e-118 428.3 342 67.8
Carub.0007s2051 Capsella rubella HOM05D004256 ORTHO05D005224 4.8e-117 425.2 340 67.1
Thhalv10024326m.g Eutrema salsugineum HOM05D004256 ORTHO05D005224 7.4e-110 401.4 343 63.0
AL7G33240 Arabidopsis lyrata HOM05D004256 ORTHO05D005224 1.4e-108 397.1 350 63.1
Carub.0007s2052 Capsella rubella HOM05D004256 ORTHO05D005224 5.3e-108 395.2 353 60.9
CARHR227470 Cardamine hirsuta HOM05D004256 ORTHO05D005224 6.9e-108 394.8 345 60.3
Sp7g19000 Schrenkiella parvula HOM05D004256 ORTHO05D005224 4.5e-107 392.1 350 60.6
AT4G20910 Arabidopsis thaliana HOM05D004256 ORTHO05D005224 1.7e-106 390.2 349 62.5
BolC1t01426H Brassica oleracea HOM05D004256 ORTHO05D005224 2.9e-106 389.4 342 60.5
Aa31LG6G2980 Aethionema arabicum HOM05D004256 ORTHO05D005224 4.2e-105 385.6 349 60.5
BraA01t01176Z Brassica rapa HOM05D004256 ORTHO05D005224 4.2e-105 385.6 342 59.4
BcaB03g11710 Brassica carinata HOM05D004256 ORTHO05D005224 1.8e-103 380.2 354 60.5
THA.LOC104812246 Tarenaya hassleriana HOM05D004256 ORTHO05D005224 2.6e-99 366.3 345 56.8
Thecc.06G004200 Theobroma cacao HOM05D004256 ORTHO05D005224 4.6e-80 302.4 341 48.4
Nitab4.5_0001583g0180 Nicotiana tabacum HOM05D004256 ORTHO05D005224 6.1e-80 302.0 349 47.9
BcaC01g00730 Brassica carinata HOM05D004256 ORTHO05D005224 1.0e-79 301.2 208 74.0
COL.COLO4_26853 Corchorus olitorius HOM05D004256 ORTHO05D005224 1.1e-78 297.7 348 48.3
TWI38G1119 Tripterygium wilfordii HOM05D004256 ORTHO05D005224 1.1e-78 297.7 343 48.4
Nitab4.5_0001225g0210 Nicotiana tabacum HOM05D004256 ORTHO05D005224 1.3e-77 294.3 349 47.3
Solyc02g070030.4 Solanum lycopersicum HOM05D004256 ORTHO05D005224 2.8e-77 293.1 350 47.7
Gohir.D06G123900 Gossypium hirsutum HOM05D004256 ORTHO05D005224 4.8e-77 292.4 344 47.7
Sopen02g019190 Solanum pennellii HOM05D004256 ORTHO05D005224 4.8e-77 292.4 350 47.7
Gorai.010G144100 Gossypium raimondii HOM05D004256 ORTHO05D005224 8.2e-77 291.6 344 47.7
CAN.G79.16 Capsicum annuum HOM05D004256 ORTHO05D005224 9.1e-76 288.1 350 46.0
Peaxi162Scf00670g00215 Petunia axillaris HOM05D004256 ORTHO05D005224 1.2e-75 287.7 347 46.1
Gohir.A06G119600 Gossypium hirsutum HOM05D004256 ORTHO05D005224 7.7e-75 285.0 344 46.8
Duzib192G0446 Durio zibethinus HOM05D004256 ORTHO05D005224 2.2e-74 283.5 344 46.5
TWI63G0578 Tripterygium wilfordii HOM05D004256 ORTHO05D005224 6.5e-74 282.0 343 46.9
TAR627G0580 Trochodendron aralioides HOM05D004256 ORTHO05D005224 1.9e-73 280.4 349 46.1
Atru.chr10.795 Acer truncatum HOM05D004256 ORTHO05D005224 3.2e-73 279.6 368 45.9
CSS0013637 Camellia sinensis var. sinensis HOM05D004256 ORTHO05D005224 3.2e-73 279.6 341 44.9
Manes.06G068000 Manihot esculenta HOM05D004256 ORTHO05D005224 2.7e-72 276.6 338 45.6
Actinidia31384 Actinidia chinensis HOM05D004256 ORTHO05D005224 3.6e-72 276.2 344 43.9
MD05G1271600 Malus domestica HOM05D004256 ORTHO05D005224 3.6e-72 276.2 345 45.2
Nn2g15522 Nelumbo nucifera HOM05D004256 ORTHO05D005224 6.1e-72 275.4 341 46.0
RcHm_v2.0_Chr5g0016471 Rosa chinensis HOM05D004256 ORTHO05D005224 1.8e-71 273.9 354 44.6
Prupe.4G091400 Prunus persica HOM05D004256 ORTHO05D005224 2.3e-71 273.5 345 44.9
SalBow7G4118 Salvia bowleyana HOM05D004256 ORTHO05D005224 2.3e-71 273.5 338 44.7
Dinv11058 Davidia involucrata HOM05D004256 ORTHO05D005224 6.7e-71 271.9 350 45.1
SGA_v2.0_scaffold106G30680 Striga asiatica HOM05D004256 ORTHO05D005224 1.5e-70 270.8 334 47.0
MD10G1252200 Malus domestica HOM05D004256 ORTHO05D005224 4.4e-70 269.2 345 44.9
Sabra16G0315900 Salix brachista HOM05D004256 ORTHO05D005224 4.4e-70 269.2 349 45.0
Rhsim02G0162800 Rhododendron simsii HOM05D004256 ORTHO05D005224 9.7e-70 268.1 344 44.8
QL05p062735 Quercus lobata HOM05D004256 ORTHO05D005224 1.7e-69 267.3 346 43.6
Cc09_g07800 Coffea canephora HOM05D004256 ORTHO05D005224 2.8e-69 266.5 346 42.2
arahy.Tifrunner.gnm1.ann1.71MGM7 Arachis hypogaea HOM05D004256 ORTHO05D005224 4.8e-69 265.8 339 45.7
arahy.Tifrunner.gnm1.ann1.NJCF43 Arachis hypogaea HOM05D004256 ORTHO05D005224 4.8e-69 265.8 339 45.4
Potri.001G465500 Populus trichocarpa HOM05D004256 ORTHO05D005224 1.1e-68 264.6 350 44.6
Migut.H01323 Erythranthe guttata HOM05D004256 ORTHO05D005224 1.8e-68 263.8 336 45.2
Cfa004790 Carpinus fangiana HOM05D004256 ORTHO05D005224 3.1e-68 263.1 344 44.2
MBI02_g25367_MAGBIO Magnolia biondii HOM05D004256 ORTHO05D005224 3.1e-68 263.1 340 45.0
GSVIVG01021670001 Vitis vinifera HOM05D004256 ORTHO05D005224 4.1e-68 262.7 347 45.0
Dinv16826 Davidia involucrata HOM05D004256 ORTHO05D005224 7.0e-68 261.9 347 43.5
FvH4_3g10230 Fragaria vesca HOM05D004256 ORTHO05D005224 9.1e-68 261.5 357 42.3
BcaC09g51293 Brassica carinata HOM05D004256 ORTHO05D005224 1.6e-67 260.8 229 61.6
CiPaw.09G142400 Carya illinoinensis HOM05D004256 ORTHO05D005224 2.6e-67 260.0 354 42.7
Lj1A1161T63 Lonicera japonica HOM05D004256 ORTHO05D005224 3.5e-67 259.6 336 44.3
FAN11G3535 Fragaria x ananassa HOM05D004256 ORTHO05D005224 4.5e-67 259.2 357 42.0
ClCG03G008210 Citrullus lanatus HOM05D004256 ORTHO05D005224 5.9e-67 258.8 347 42.7
Lalb_Chr12g0208801 Lupinus albus HOM05D004256 ORTHO05D005224 5.9e-67 258.8 343 44.3
MELO3C002826.2 Cucumis melo HOM05D004256 ORTHO05D005224 5.0e-66 255.8 345 42.0
FAN16G0878 Fragaria x ananassa HOM05D004256 ORTHO05D005224 5.0e-66 255.8 357 41.7
HanXRQChr04g0117221 Helianthus annuus HOM05D004256 ORTHO05D005224 6.5e-66 255.4 332 42.8
CsaV3_1G037200 Cucumis sativus L. HOM05D004256 ORTHO05D005224 1.1e-65 254.6 343 42.3
FAN21G3884 Fragaria x ananassa HOM05D004256 ORTHO05D005224 1.1e-65 254.6 357 41.7
PGR031G3593 Punica granatum HOM05D004256 ORTHO05D005224 2.5e-65 253.4 343 43.1
Ciclev10014179m.g Citrus clementina HOM05D004256 ORTHO05D005224 3.2e-65 253.1 344 43.9
ECA236G4703 Erigeron canadensis HOM05D004256 ORTHO05D005224 9.4e-65 251.5 339 43.4
Glyma.05G126600 Glycine max HOM05D004256 ORTHO05D005224 9.4e-65 251.5 345 43.5
Oeu021898.3 Olea europaea HOM05D004256 ORTHO05D005224 2.7e-64 250.0 345 42.3
DCAR_003847 Daucus carota HOM05D004256 ORTHO05D005224 4.7e-64 249.2 345 42.0
Haze_10384 Corylus avellana HOM05D004256 ORTHO05D005224 1.4e-63 247.7 358 41.3
Haze_10386 Corylus avellana HOM05D004256 ORTHO05D005224 1.4e-63 247.7 358 41.3
Glyma.08G081600 Glycine max HOM05D004256 ORTHO05D005224 1.8e-63 247.3 343 42.9
Phvul.002G198200 Phaseolus vulgaris HOM05D004256 ORTHO05D005224 2.3e-63 246.9 345 42.0
TPR.G30378 Trifolium pratense HOM05D004256 ORTHO05D005224 3.0e-63 246.5 347 41.5
Sed0001829 Sechium edule HOM05D004256 ORTHO05D005224 5.2e-63 245.7 352 39.8
Sc17g0004590 Simmondsia chinensis HOM05D004256 ORTHO05D005224 6.7e-63 245.4 342 41.8
Medtr4g094545 Medicago truncatula HOM05D004256 ORTHO05D005224 3.3e-62 243.0 343 41.4
PSO675G2772 Papaver somniferum HOM05D004256 ORTHO05D005224 9.7e-62 241.5 334 42.2
Ca_18290_v3 Cicer arietinum L. HOM05D004256 ORTHO05D005224 3.7e-61 239.6 338 41.7
Potri.011G163600 Populus trichocarpa HOM05D004256 ORTHO05D005224 1.4e-60 237.7 347 41.5
CANSAT35G1931 Cannabis sativa HOM05D004256 ORTHO05D005224 3.1e-60 236.5 342 41.5
Lj4g0013937 Lotus japonicus HOM05D004256 ORTHO05D005224 4.1e-60 236.1 348 42.5
Lalb_Chr13g0291451 Lupinus albus HOM05D004256 ORTHO05D005224 2.7e-59 233.4 347 42.4
Psat7g093560 Pisum sativum HOM05D004256 ORTHO05D005224 2.7e-59 233.4 343 41.7
FAN18G3233 Fragaria x ananassa HOM05D004256 ORTHO05D005224 5.9e-59 232.3 356 40.4
Lsat_1_v5_gn_7_34341 Lactuca sativa HOM05D004256 ORTHO05D005224 5.9e-59 232.3 345 40.0
FAN04G0519 Fragaria x ananassa HOM05D004256 ORTHO05D005224 7.7e-59 231.9 354 41.0
Eucgr.K01946 Eucalyptus grandis HOM05D004256 ORTHO05D005224 1.3e-58 231.1 344 39.2
BcaNung04717 Brassica carinata HOM05D004256 ORTHO05D005224 1.1e-57 228.0 259 51.7
FAN13G2402 Fragaria x ananassa HOM05D004256 ORTHO05D005224 2.5e-57 226.9 354 40.4
Aqoxy5G02462 Aquilegia oxysepala HOM05D004256 ORTHO05D005224 7.2e-57 225.3 342 41.2
Ah.14g086130 Amaranthus hybridus HOM05D004256 ORTHO05D005224 3.0e-55 219.9 346 39.6
Sp7g19005 Schrenkiella parvula HOM05D004256 ORTHO05D005224 1.5e-54 217.6 180 63.9
AUR62043099 Chenopodium quinoa HOM05D004256 ORTHO05D005224 7.5e-54 215.3 349 39.5
HPP92_009410 Vanilla planifolia HOM05D004256 ORTHO05D005224 9.8e-54 214.9 339 36.6
EL10Ac8g19544 Beta vulgaris HOM05D004256 ORTHO05D005224 6.3e-53 212.2 346 38.2
AUR62034030 Chenopodium quinoa HOM05D004256 ORTHO05D005224 1.1e-52 211.5 349 39.3
Os07g0164000 Oryza sativa ssp. japonica HOM05D004256 ORTHO05D005224 1.1e-49 201.4 344 36.3
Eucgr.L00874 Eucalyptus grandis HOM05D004256 ORTHO05D005224 1.5e-49 201.1 272 40.8
Zm00001eb300700 Zea mays HOM05D004256 ORTHO05D005224 1.8e-47 194.1 339 36.0
CDE02G4682 Ceratophyllum demersum HOM05D004256 ORTHO05D005224 1.3e-45 188.0 265 39.2
FAN08G1809 Fragaria x ananassa HOM05D004256 ORTHO05D005224 8.3e-45 185.3 344 36.3
FAN25G0985 Fragaria x ananassa HOM05D004256 ORTHO05D005224 7.8e-43 178.7 204 43.6
VMungo0251G1323 Vigna mungo HOM05D004256 ORTHO05D005224 3.8e-42 176.4 268 37.3
FAN18G2742 Fragaria x ananassa HOM05D004256 ORTHO05D005224 1.5e-41 174.5 393 33.6
Cpa.g.sc166.41 Carica papaya HOM05D004256 ORTHO05D007693 2.5e-41 173.7 255 43.1
Oeu014331.2 Olea europaea HOM05D004256 ORTHO05D005224 2.8e-40 170.2 233 41.2
BcaC06g34131 Brassica carinata HOM05D004256 ORTHO05D005224 6.1e-40 169.1 128 67.2
ATR1098G117 Amborella trichopoda HOM05D004256 ORTHO05D005224 1.8e-39 167.5 236 41.1
BcaC08g44368 Brassica carinata HOM05D004256 ORTHO05D005224 1.2e-35 154.8 151 57.0
BcaC04g20971 Brassica carinata HOM05D004256 ORTHO05D005224 2.3e-34 150.6 151 54.3
Mapoly0004s0071 Marchantia polymorpha HOM05D004256 ORTHO05D005224 5.6e-33 146.0 328 31.7
BcaC02g08729 Brassica carinata HOM05D004256 ORTHO05D021760 7.0e-28 129.0 117 60.7
Pp3c1_60 Physcomitrium patens HOM05D004256 ORTHO05D005224 3.0e-26 123.6 334 29.3
BcaC01g00450 Brassica carinata HOM05D004256 ORTHO05D032009 1.2e-22 111.7 99 62.6
C03p79980 Brassica napus HOM05D004256 ORTHO05D032009 1.2e-22 111.7 99 62.6
BolC3t20250H Brassica oleracea HOM05D004256 ORTHO05D032009 1.2e-22 111.7 99 62.6
BolC6t37010H Brassica oleracea HOM05D004256 ORTHO05D005224 5.8e-22 109.4 114 55.3
BolC1t01694H Brassica oleracea HOM05D004256 ORTHO05D021760 7.5e-22 109.0 91 65.9
BcaC09g51040 Brassica carinata HOM05D004256 ORTHO05D005224 1.3e-21 108.2 89 66.3
HanXRQChr04g0117231 Helianthus annuus HOM05D004256 ORTHO05D005224 1.3e-21 108.2 169 39.6
C01p17580 Brassica napus HOM05D004256 ORTHO05D005224 6.4e-21 105.9 91 65.9
unitig_0.g923 Utricularia gibba HOM05D004256 ORTHO05D005224 1.1e-20 105.1 337 26.4
Haze_10382 Corylus avellana HOM05D004256 ORTHO05D005224 7.8e-19 99.0 161 39.8
BolC1t04773H Brassica oleracea HOM05D004256 ORTHO05D021760 1.9e-17 94.4 83 61.4
Haze_10375 Corylus avellana HOM05D004256 ORTHO05D005224 1.9e-17 94.4 137 37.2
A09p29560 Brassica napus HOM05D004256 ORTHO05D005224 5.6e-17 92.8 114 48.2
AagrBONN_evm.TU.Sc2ySwM_117.1656 Anthoceros agrestis HOM05D004256 ORTHO05D005224 2.1e-16 90.9 248 26.6
SMO165G0118 Selaginella moellendorffii HOM05D004256 ORTHO05D005224 4.7e-16 89.7 235 28.5
Haze_01153 Corylus avellana HOM05D004256 ORTHO05D005224 6.2e-16 89.4 159 35.8
C03p36320 Brassica napus HOM05D004256 ORTHO05D021760 1.1e-15 88.6 85 61.2
BolC3t15944H Brassica oleracea HOM05D004256 ORTHO05D021760 1.1e-15 88.6 85 61.2
PGSC0003DMG400021115 Solanum tuberosum HOM05D004256 ORTHO05D005224 2.4e-15 87.4 107 44.9
C01p48000 Brassica napus HOM05D004256 ORTHO05D021760 1.7e-13 81.3 103 49.5
VMungo0251G1407 Vigna mungo HOM05D004256 ORTHO05D005224 1.7e-13 81.3 77 54.5
FvH4_5g29180 Fragaria vesca HOM05D004256 ORTHO05D005224 1.6e-11 74.7 78 51.3


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