Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g31962 Brassica carinata HOM05D005074 ORTHO05D006853 6.1e-94 347.4 172 100.0
BcaC06g31973 Brassica carinata HOM05D005074 ORTHO05D006853 5.9e-89 330.9 163 100.0
A10p33710 Brassica napus HOM05D005074 ORTHO05D006853 4.1e-82 308.1 163 91.4
C09p74610 Brassica napus HOM05D005074 ORTHO05D006853 1.7e-80 302.8 163 89.6
BolC9t60195H Brassica oleracea HOM05D005074 ORTHO05D006853 1.7e-80 302.8 163 89.6
BraA10t45403Z Brassica rapa HOM05D005074 ORTHO05D006853 2.3e-80 302.4 163 90.2
Sp6g40630 Schrenkiella parvula HOM05D005074 ORTHO05D006853 4.7e-78 294.7 160 87.5
CARHR211670 Cardamine hirsuta HOM05D005074 ORTHO05D006853 1.4e-74 283.1 160 83.8
AL6G10830 Arabidopsis lyrata HOM05D005074 ORTHO05D006853 7.1e-74 280.8 158 84.8
Carub.0006s0050 Capsella rubella HOM05D005074 ORTHO05D006853 9.2e-74 280.4 163 82.2
AT5G01310 Arabidopsis thaliana HOM05D005074 ORTHO05D006853 1.6e-73 279.6 160 83.8
Thhalv10012562m.g Eutrema salsugineum HOM05D005074 ORTHO05D006853 1.7e-72 276.2 203 69.5
Aa31LG1G22940 Aethionema arabicum HOM05D005074 ORTHO05D006853 2.4e-66 255.8 157 77.1
THA.LOC104816650 Tarenaya hassleriana HOM05D005074 ORTHO05D006853 5.6e-63 244.6 160 70.0
arahy.Tifrunner.gnm1.ann1.W8IS2K Arachis hypogaea HOM05D005074 ORTHO05D006853 3.5e-57 225.3 159 66.0
QL08p015889 Quercus lobata HOM05D005074 ORTHO05D006853 7.8e-57 224.2 159 68.6
Lalb_Chr07g0191391 Lupinus albus HOM05D005074 ORTHO05D006853 1.7e-56 223.0 156 67.3
Glyma.01G117800 Glycine max HOM05D005074 ORTHO05D006853 2.3e-56 222.6 159 66.7
Potri.016G120200 Populus trichocarpa HOM05D005074 ORTHO05D006853 2.3e-56 222.6 160 65.6
arahy.Tifrunner.gnm1.ann1.N71AR0 Arachis hypogaea HOM05D005074 ORTHO05D006853 8.7e-56 220.7 159 64.2
Manes.09G106200 Manihot esculenta HOM05D005074 ORTHO05D006853 1.1e-55 220.3 161 62.7
Nn2g10923 Nelumbo nucifera HOM05D005074 ORTHO05D006853 1.5e-55 219.9 161 64.6
Phvul.010G073200 Phaseolus vulgaris HOM05D005074 ORTHO05D006853 2.5e-55 219.2 159 66.0
PGR031G0257 Punica granatum HOM05D005074 ORTHO05D006853 3.3e-55 218.8 160 66.9
Sabra16G0116100 Salix brachista HOM05D005074 ORTHO05D006853 3.3e-55 218.8 161 63.4
Aqoxy4G02460 Aquilegia oxysepala HOM05D005074 ORTHO05D006853 4.3e-55 218.4 159 65.4
Lsat_1_v5_gn_8_100780 Lactuca sativa HOM05D005074 ORTHO05D006853 4.3e-55 218.4 159 64.8
Dinv13134 Davidia involucrata HOM05D005074 ORTHO05D006853 5.6e-55 218.0 159 64.8
Rhsim05G0219800 Rhododendron simsii HOM05D005074 ORTHO05D006853 5.6e-55 218.0 155 65.8
VMungo0331G1905 Vigna mungo HOM05D005074 ORTHO05D006853 7.3e-55 217.6 159 66.0
CAN.G41.5 Capsicum annuum HOM05D005074 ORTHO05D006853 1.6e-54 216.5 155 65.2
Hund10968 Selenicereus undatus HOM05D005074 ORTHO05D006853 2.1e-54 216.1 158 62.7
Ah.02g115540 Amaranthus hybridus HOM05D005074 ORTHO05D006853 4.8e-54 214.9 155 65.8
CiPaw.10G158300 Carya illinoinensis HOM05D005074 ORTHO05D006853 4.8e-54 214.9 159 64.2
EL10Ac5g12524 Beta vulgaris HOM05D005074 ORTHO05D006853 6.2e-54 214.5 158 62.7
ECA236G3605 Erigeron canadensis HOM05D005074 ORTHO05D006853 6.2e-54 214.5 159 64.8
Eucgr.A00552 Eucalyptus grandis HOM05D005074 ORTHO05D006853 6.2e-54 214.5 162 61.1
FvH4_6g11090 Fragaria vesca HOM05D005074 ORTHO05D006853 8.1e-54 214.2 163 63.2
Os03g0293400 Oryza sativa ssp. japonica HOM05D005074 ORTHO05D006853 8.1e-54 214.2 157 63.7
TWI74G0571 Tripterygium wilfordii HOM05D005074 ORTHO05D006853 1.4e-53 213.4 159 63.5
GSVIVG01003941001 Vitis vinifera HOM05D005074 ORTHO05D006853 1.4e-53 213.4 162 61.7
Zm00001eb013510 Zea mays HOM05D005074 ORTHO05D006853 1.4e-53 213.4 156 66.0
AUR62030501 Chenopodium quinoa HOM05D005074 ORTHO05D006853 1.8e-53 213.0 158 63.3
MD04G1160300 Malus domestica HOM05D005074 ORTHO05D006853 1.8e-53 213.0 161 62.1
Sed0022379 Sechium edule HOM05D005074 ORTHO05D006853 2.4e-53 212.6 158 63.9
CSS0047541 Camellia sinensis var. sinensis HOM05D005074 ORTHO05D006853 3.1e-53 212.2 160 61.2
Peaxi162Scf01132g00134 Petunia axillaris HOM05D005074 ORTHO05D006853 3.1e-53 212.2 156 63.5
Prupe.6G280900 Prunus persica HOM05D005074 ORTHO05D006853 3.1e-53 212.2 159 63.5
RcHm_v2.0_Chr3g0462521 Rosa chinensis HOM05D005074 ORTHO05D006853 3.1e-53 212.2 163 63.2
SGA_v2.0_scaffold85G26714 Striga asiatica HOM05D005074 ORTHO05D006853 3.1e-53 212.2 156 62.2
CSS0046053 Camellia sinensis var. sinensis HOM05D005074 ORTHO05D006853 4.0e-53 211.8 160 61.2
Lj5g0028092 Lotus japonicus HOM05D005074 ORTHO05D006853 4.0e-53 211.8 161 64.0
CANSAT35G1267 Cannabis sativa HOM05D005074 ORTHO05D006853 5.3e-53 211.5 162 62.3
MELO3C009144.2 Cucumis melo HOM05D005074 ORTHO05D006853 5.3e-53 211.5 162 61.1
CsaV3_3G033540 Cucumis sativus L. HOM05D005074 ORTHO05D006853 5.3e-53 211.5 162 61.1
MBI03_g18944_MAGBIO Magnolia biondii HOM05D005074 ORTHO05D006853 5.3e-53 211.5 159 64.2
CDE08G0259 Ceratophyllum demersum HOM05D005074 ORTHO05D006853 6.9e-53 211.1 159 64.8
Ciclev10011130m.g Citrus clementina HOM05D005074 ORTHO05D006853 6.9e-53 211.1 162 61.7
Nitab4.5_0012964g0020 Nicotiana tabacum HOM05D005074 ORTHO05D006853 6.9e-53 211.1 155 64.5
Psat6g003720 Pisum sativum HOM05D005074 ORTHO05D006853 6.9e-53 211.1 156 62.8
Solyc09g005100.4 Solanum lycopersicum HOM05D005074 ORTHO05D006853 6.9e-53 211.1 155 64.5
Sopen09g001080 Solanum pennellii HOM05D005074 ORTHO05D006853 9.0e-53 210.7 155 64.5
ClCG10G022350 Citrullus lanatus HOM05D005074 ORTHO05D006853 1.2e-52 210.3 162 61.1
COL.COLO4_14500 Corchorus olitorius HOM05D005074 ORTHO05D006853 1.5e-52 209.9 155 65.8
ATR0716G066 Amborella trichopoda HOM05D005074 ORTHO05D006853 2.6e-52 209.1 159 61.6
Gohir.A04G093700 Gossypium hirsutum HOM05D005074 ORTHO05D006853 2.6e-52 209.1 163 60.7
Gohir.D04G133000 Gossypium hirsutum HOM05D005074 ORTHO05D006853 2.6e-52 209.1 163 60.7
PGSC0003DMG400006257 Solanum tuberosum HOM05D005074 ORTHO05D006853 2.6e-52 209.1 155 63.2
FAN05G5223 Fragaria x ananassa HOM05D005074 ORTHO05D006853 3.4e-52 208.8 173 60.7
Nitab4.5_0000195g0210 Nicotiana tabacum HOM05D005074 ORTHO05D006853 3.4e-52 208.8 155 63.2
TAR633G0154 Trochodendron aralioides HOM05D005074 ORTHO05D006853 4.5e-52 208.4 156 64.1
Medtr1g024820 Medicago truncatula HOM05D005074 ORTHO05D006853 5.8e-52 208.0 156 61.5
Ca_13410_v3 Cicer arietinum L. HOM05D005074 ORTHO05D006853 7.6e-52 207.6 156 62.2
Ca_13419_v3 Cicer arietinum L. HOM05D005074 ORTHO05D006853 7.6e-52 207.6 156 62.2
Cpa.g.sc120.24 Carica papaya HOM05D005074 ORTHO05D006853 1.3e-51 206.8 163 61.3
Cfa017171 Carpinus fangiana HOM05D005074 ORTHO05D006853 1.3e-51 206.8 159 64.2
Haze_21033 Corylus avellana HOM05D005074 ORTHO05D006853 2.2e-51 206.1 160 63.8
Hma1.2p1_0501F.1_g167650 Hydrangea macrophylla HOM05D005074 ORTHO05D006853 2.2e-51 206.1 159 61.6
Gorai.012G116900 Gossypium raimondii HOM05D005074 ORTHO05D006853 2.9e-51 205.7 156 61.5
Migut.J00131 Erythranthe guttata HOM05D005074 ORTHO05D006853 3.8e-51 205.3 161 58.4
Duzib128G0037 Durio zibethinus HOM05D005074 ORTHO05D006853 6.4e-51 204.5 162 61.7
Hma1.2p1_0501F.1_g167660 Hydrangea macrophylla HOM05D005074 ORTHO05D006853 6.4e-51 204.5 156 62.2
Thecc.05G011500 Theobroma cacao HOM05D005074 ORTHO05D006853 8.4e-51 204.1 162 59.3
HanXRQChr12g0383191 Helianthus annuus HOM05D005074 ORTHO05D006853 1.4e-50 203.4 156 60.3
DCAR_006624 Daucus carota HOM05D005074 ORTHO05D006853 1.9e-50 203.0 159 61.0
FAN02G3586 Fragaria x ananassa HOM05D005074 ORTHO05D006853 1.9e-50 203.0 173 59.0
FAN14G3962 Fragaria x ananassa HOM05D005074 ORTHO05D006853 3.2e-50 202.2 172 59.3
PSO384G2802 Papaver somniferum HOM05D005074 ORTHO05D006853 4.2e-50 201.8 162 58.0
Cc06_g01060 Coffea canephora HOM05D005074 ORTHO05D006853 1.6e-49 199.9 159 59.7
MSTRG.18991 Avicennia marina HOM05D005074 ORTHO05D006853 2.1e-49 199.5 165 57.6
TPR.G34365 Trifolium pratense HOM05D005074 ORTHO05D006853 2.1e-49 199.5 166 57.2
PSO339G4313 Papaver somniferum HOM05D005074 ORTHO05D006853 3.5e-49 198.7 159 58.5
Actinidia29087 Actinidia chinensis HOM05D005074 ORTHO05D006853 1.0e-48 197.2 156 60.3
Lj2C71T3 Lonicera japonica HOM05D005074 ORTHO05D006853 3.0e-48 195.7 163 57.7
unitig_27.g24848 Utricularia gibba HOM05D005074 ORTHO05D006853 5.1e-48 194.9 167 56.9
HPP92_025102 Vanilla planifolia HOM05D005074 ORTHO05D006853 5.6e-47 191.4 156 57.7
AagrBONN_evm.TU.Sc2ySwM_344.4419 Anthoceros agrestis HOM05D005074 ORTHO05D006853 5.3e-45 184.9 163 56.4
SalBow5G0276 Salvia bowleyana HOM05D005074 ORTHO05D006853 1.2e-44 183.7 144 59.0
SalBow5G3519 Salvia bowleyana HOM05D005074 ORTHO05D006853 2.6e-44 182.6 144 58.3
Mapoly0120s0055 Marchantia polymorpha HOM05D005074 ORTHO05D006853 5.8e-44 181.4 144 59.0
SMO119G0484 Selaginella moellendorffii HOM05D005074 ORTHO05D006853 2.9e-43 179.1 144 59.7
Pp3c11_18160 Physcomitrium patens HOM05D005074 ORTHO05D006853 1.9e-42 176.4 145 57.9
AUR62030792 Chenopodium quinoa HOM05D005074 ORTHO05D006853 1.9e-39 166.4 122 63.9
Glyma.U000401 Glycine max HOM05D005074 ORTHO05D006853 1.3e-38 163.7 124 62.9
vmacro20302 Vaccinium macrocarpon HOM05D005074 ORTHO05D006853 6.7e-32 141.4 100 67.0
Oeu033574.2 Olea europaea HOM05D005074 ORTHO05D006853 1.9e-31 139.8 156 47.4
Cre06.g297904 Chlamydomonas reinhardtii HOM05D005074 ORTHO05D006853 4.1e-29 132.1 144 49.3
Duzib093G1335 Durio zibethinus HOM05D005074 ORTHO05D006853 4.5e-28 128.6 164 45.1
Aa31LG1G22960 Aethionema arabicum HOM05D005074 ORTHO05D006853 5.3e-21 105.1 103 53.4
MCO14G225 Micromonas commoda HOM05D005074 ORTHO05D006853 9.7e-15 84.3 151 31.8
Atru.chr8.2282 Acer truncatum HOM05D005074 ORTHO05D006853 5.0e-11 72.0 56 58.9
PSO675G8941 Papaver somniferum HOM05D005074 ORTHO05D006853 1.1e-10 70.9 123 30.9
Aa31LG8G1910 Aethionema arabicum HOM05D005074 ORTHO05D006853 2.6e-07 59.7 44 59.1
Cfa025975 Carpinus fangiana HOM05D005074 ORTHO05D006853 4.4e-07 58.9 92 38.0


User provided reference genes

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