Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g22518 Brassica carinata HOM05D005196 ORTHO05D006107 7.6e-158 560.5 283 100.0
C09p18370 Brassica napus HOM05D005196 ORTHO05D006107 9.4e-124 447.2 230 99.1
BolC9t54730H Brassica oleracea HOM05D005196 ORTHO05D006107 9.4e-124 447.2 230 99.1
A09p15170 Brassica napus HOM05D005196 ORTHO05D006107 1.8e-119 433.0 233 96.6
BraA09t37159Z Brassica rapa HOM05D005196 ORTHO05D006107 7.7e-118 427.6 233 95.3
BcaB07g31533 Brassica carinata HOM05D005196 ORTHO05D006107 2.8e-112 409.1 237 91.1
BcaB07g31421 Brassica carinata HOM05D005196 ORTHO05D006107 3.7e-112 408.7 239 90.4
BcaC04g22662 Brassica carinata HOM05D005196 ORTHO05D006107 1.1e-111 407.1 235 91.9
C09p16940 Brassica napus HOM05D005196 ORTHO05D006107 1.4e-111 406.8 235 91.5
BraA09t37052Z Brassica rapa HOM05D005196 ORTHO05D006107 2.0e-110 402.9 235 91.9
A09p14050 Brassica napus HOM05D005196 ORTHO05D006107 3.5e-110 402.1 236 91.5
BolC9t54591H Brassica oleracea HOM05D005196 ORTHO05D006107 6.5e-109 397.9 233 90.1
Sp2g00720 Schrenkiella parvula HOM05D005196 ORTHO05D006107 1.8e-106 389.8 237 86.9
Aa31LG2G1060 Aethionema arabicum HOM05D005196 ORTHO05D006107 5.0e-101 371.7 236 84.3
AT1G63970 Arabidopsis thaliana HOM05D005196 ORTHO05D006107 6.1e-99 364.8 237 85.7
AL2G11140 Arabidopsis lyrata HOM05D005196 ORTHO05D006107 1.8e-98 363.2 238 84.0
CARHR047010 Cardamine hirsuta HOM05D005196 ORTHO05D006107 4.0e-98 362.1 232 83.6
THA.LOC104809368 Tarenaya hassleriana HOM05D005196 ORTHO05D006107 3.4e-97 359.0 236 79.7
Carub.0002s0087 Capsella rubella HOM05D005196 ORTHO05D006107 1.3e-96 357.1 237 81.4
THA.LOC104823600 Tarenaya hassleriana HOM05D005196 ORTHO05D006107 2.8e-96 355.9 232 81.5
PGR031G3114 Punica granatum HOM05D005196 ORTHO05D006107 6.3e-88 328.2 191 86.4
Lsat_1_v5_gn_6_84980 Lactuca sativa HOM05D005196 ORTHO05D006107 3.1e-87 325.9 237 72.6
HanXRQChr03g0085971 Helianthus annuus HOM05D005196 ORTHO05D006107 3.5e-86 322.4 236 73.3
Potri.001G099300 Populus trichocarpa HOM05D005196 ORTHO05D006107 5.9e-86 321.6 237 72.6
Potri.003G132400 Populus trichocarpa HOM05D005196 ORTHO05D006107 1.7e-85 320.1 233 72.1
Ciclev10021991m.g Citrus clementina HOM05D005196 ORTHO05D006107 2.3e-85 319.7 239 72.4
MD14G1111600 Malus domestica HOM05D005196 ORTHO05D006107 3.8e-85 318.9 247 70.0
Cpa.g.sc631.3 Carica papaya HOM05D005196 ORTHO05D006107 5.0e-85 318.5 209 77.5
Migut.A00721 Erythranthe guttata HOM05D005196 ORTHO05D006107 6.6e-85 318.2 188 85.6
Lj2A178G47 Lonicera japonica HOM05D005196 ORTHO05D006107 6.6e-85 318.2 240 71.2
Nn1g01669 Nelumbo nucifera HOM05D005196 ORTHO05D006107 6.6e-85 318.2 242 69.4
Gohir.D03G078300 Gossypium hirsutum HOM05D005196 ORTHO05D006107 8.6e-85 317.8 183 85.8
Gorai.003G085800 Gossypium raimondii HOM05D005196 ORTHO05D006107 8.6e-85 317.8 183 85.8
unitig_37.g12237 Utricularia gibba HOM05D005196 ORTHO05D006107 1.5e-84 317.0 237 70.9
FAN13G1103 Fragaria x ananassa HOM05D005196 ORTHO05D006107 2.5e-84 316.2 230 71.7
FvH4_5g03170 Fragaria vesca HOM05D005196 ORTHO05D006107 3.3e-84 315.8 226 73.0
Hma1.2p1_0377F.1_g139550 Hydrangea macrophylla HOM05D005196 ORTHO05D006107 3.3e-84 315.8 207 76.8
Nitab4.5_0007906g0030 Nicotiana tabacum HOM05D005196 ORTHO05D006107 3.3e-84 315.8 234 70.5
Duzib205G0943 Durio zibethinus HOM05D005196 ORTHO05D006107 4.3e-84 315.5 218 76.1
FAN18G0698 Fragaria x ananassa HOM05D005196 ORTHO05D006107 5.6e-84 315.1 179 86.0
PSO782G4831 Papaver somniferum HOM05D005196 ORTHO05D006107 7.3e-84 314.7 240 70.4
Sabra03G0094900 Salix brachista HOM05D005196 ORTHO05D006107 7.3e-84 314.7 233 71.7
Hund11434 Selenicereus undatus HOM05D005196 ORTHO05D006107 7.3e-84 314.7 199 79.9
Thecc.03G286300 Theobroma cacao HOM05D005196 ORTHO05D006107 7.3e-84 314.7 183 84.7
GSVIVG01019415001 Vitis vinifera HOM05D005196 ORTHO05D006107 7.3e-84 314.7 182 86.8
FAN08G3453 Fragaria x ananassa HOM05D005196 ORTHO05D006107 9.5e-84 314.3 229 72.5
MSTRG.11956 Avicennia marina HOM05D005196 ORTHO05D006107 1.2e-83 313.9 194 82.0
Duzib068G0196 Durio zibethinus HOM05D005196 ORTHO05D006107 1.2e-83 313.9 183 85.2
Gohir.A02G105500 Gossypium hirsutum HOM05D005196 ORTHO05D006107 1.6e-83 313.5 216 75.0
COL.COLO4_08364 Corchorus olitorius HOM05D005196 ORTHO05D006107 2.1e-83 313.2 183 84.2
Peaxi162Scf00074g01724 Petunia axillaris HOM05D005196 ORTHO05D006107 2.1e-83 313.2 237 69.2
AUR62010748 Chenopodium quinoa HOM05D005196 ORTHO05D006107 3.6e-83 312.4 187 81.3
FAN04G1400 Fragaria x ananassa HOM05D005196 ORTHO05D006107 3.6e-83 312.4 226 72.1
RcHm_v2.0_Chr7g0196611 Rosa chinensis HOM05D005196 ORTHO05D006107 3.6e-83 312.4 232 71.1
PSO478G4030 Papaver somniferum HOM05D005196 ORTHO05D006107 4.7e-83 312.0 196 79.6
PGSC0003DMG400012185 Solanum tuberosum HOM05D005196 ORTHO05D006107 6.1e-83 311.6 227 73.1
Aqoxy7G00203 Aquilegia oxysepala HOM05D005196 ORTHO05D006107 8.0e-83 311.2 245 67.8
ClCG07G007880 Citrullus lanatus HOM05D005196 ORTHO05D006107 8.0e-83 311.2 224 73.7
CsaV3_4G006100 Cucumis sativus L. HOM05D005196 ORTHO05D006107 8.0e-83 311.2 228 73.2
Nitab4.5_0003015g0100 Nicotiana tabacum HOM05D005196 ORTHO05D006107 8.0e-83 311.2 234 69.7
SalBow8G4511 Salvia bowleyana HOM05D005196 ORTHO05D006107 8.0e-83 311.2 236 67.8
CSS0021900 Camellia sinensis var. sinensis HOM05D005196 ORTHO05D006107 1.0e-82 310.8 237 70.9
DCAR_005572 Daucus carota HOM05D005196 ORTHO05D006107 1.0e-82 310.8 220 74.5
QL12p031809 Quercus lobata HOM05D005196 ORTHO05D006107 1.0e-82 310.8 184 84.2
Solyc08g081570.3 Solanum lycopersicum HOM05D005196 ORTHO05D006107 1.0e-82 310.8 227 71.4
Manes.02G017610 Manihot esculenta HOM05D005196 ORTHO05D006107 1.8e-82 310.1 184 82.6
Prupe.5G106300 Prunus persica HOM05D005196 ORTHO05D006107 2.3e-82 309.7 242 69.4
Sopen08g029880 Solanum pennellii HOM05D005196 ORTHO05D006107 2.3e-82 309.7 227 70.9
Sed0013368 Sechium edule HOM05D005196 ORTHO05D006107 3.0e-82 309.3 224 73.7
arahy.Tifrunner.gnm1.ann1.RG9U10 Arachis hypogaea HOM05D005196 ORTHO05D006107 5.2e-82 308.5 216 73.1
CANSAT21G0568 Cannabis sativa HOM05D005196 ORTHO05D006107 8.9e-82 307.8 245 68.2
Cc08_g15230 Coffea canephora HOM05D005196 ORTHO05D006107 8.9e-82 307.8 245 66.9
MELO3C016339.2 Cucumis melo HOM05D005196 ORTHO05D006107 1.2e-81 307.4 227 71.4
Eucgr.E00780 Eucalyptus grandis HOM05D005196 ORTHO05D006107 1.5e-81 307.0 221 72.9
Actinidia10607 Actinidia chinensis HOM05D005196 ORTHO05D006107 2.0e-81 306.6 181 85.1
Ah.12g051910 Amaranthus hybridus HOM05D005196 ORTHO05D006107 2.0e-81 306.6 225 72.9
Haze_08760 Corylus avellana HOM05D005196 ORTHO05D006107 2.0e-81 306.6 231 71.0
Gorai.004G137800 Gossypium raimondii HOM05D005196 ORTHO05D006107 2.0e-81 306.6 182 83.5
CAN.G532.37 Capsicum annuum HOM05D005196 ORTHO05D006107 2.6e-81 306.2 230 70.4
TWI81G1086 Tripterygium wilfordii HOM05D005196 ORTHO05D006107 2.6e-81 306.2 233 70.0
LjContig00312_ERROPOS870357g0014232 Lotus japonicus HOM05D005196 ORTHO05D006107 3.4e-81 305.8 240 66.2
TAR636G2140 Trochodendron aralioides HOM05D005196 ORTHO05D006107 3.4e-81 305.8 180 82.8
CiPaw.11G130000 Carya illinoinensis HOM05D005196 ORTHO05D006107 4.4e-81 305.4 234 69.7
MD06G1090700 Malus domestica HOM05D005196 ORTHO05D006107 4.4e-81 305.4 245 67.8
SGA_v2.0_scaffold111G31472 Striga asiatica HOM05D005196 ORTHO05D006107 5.8e-81 305.1 239 69.5
Sabra01G0074500 Salix brachista HOM05D005196 ORTHO05D006107 1.7e-80 303.5 188 80.3
CiPaw.12G089400 Carya illinoinensis HOM05D005196 ORTHO05D006107 2.2e-80 303.1 217 71.4
Cfa012239 Carpinus fangiana HOM05D005196 ORTHO05D006107 2.9e-80 302.8 182 83.0
Phvul.002G159900 Phaseolus vulgaris HOM05D005196 ORTHO05D006107 8.3e-80 301.2 243 66.7
MSTRG.13860 Avicennia marina HOM05D005196 ORTHO05D006107 1.1e-79 300.8 181 79.0
Gohir.D08G134600 Gossypium hirsutum HOM05D005196 ORTHO05D006107 2.4e-79 299.7 189 80.4
Glyma.11G021400 Glycine max HOM05D005196 ORTHO05D006107 3.2e-79 299.3 227 68.3
Lalb_Chr09g0320831 Lupinus albus HOM05D005196 ORTHO05D006107 4.1e-79 298.9 174 82.2
Os02g0680600 Oryza sativa ssp. japonica HOM05D005196 ORTHO05D006107 4.1e-79 298.9 204 74.5
ECA240G2051 Erigeron canadensis HOM05D000662 ORTHO05D000597 2.7e-78 296.2 221 70.1
Rhsim02G0235500 Rhododendron simsii HOM05D005196 ORTHO05D006107 2.7e-78 296.2 201 74.6
Medtr5g010010 Medicago truncatula HOM05D005196 ORTHO05D006107 3.5e-78 295.8 233 65.7
HPP92_025411 Vanilla planifolia HOM05D005196 ORTHO05D006107 4.6e-78 295.4 235 65.1
ATR0661G112 Amborella trichopoda HOM05D005196 ORTHO05D006107 6.0e-78 295.0 158 88.6
Oeu042360.2 Olea europaea HOM05D005196 ORTHO05D006107 1.7e-77 293.5 256 63.3
SGA_v2.0_scaffold144G35903 Striga asiatica HOM05D005196 ORTHO05D006107 3.0e-77 292.7 194 77.3
Ca_24538_v3 Cicer arietinum L. HOM05D005196 ORTHO05D006107 1.5e-76 290.4 192 75.5
Pp3c3_18960 Physcomitrium patens HOM05D005196 ORTHO05D006107 9.5e-76 287.7 183 77.0
SMO118G0129 Selaginella moellendorffii HOM05D005196 ORTHO05D006107 1.2e-75 287.3 179 76.5
Mapoly0107s0035 Marchantia polymorpha HOM05D005196 ORTHO05D006107 3.6e-75 285.8 208 70.2
Sc01g0009830 Simmondsia chinensis HOM05D005196 ORTHO05D006107 2.3e-74 283.1 180 77.2
SEGI_33828 Sequoiadendron giganteum HOM05D005196 ORTHO05D006107 3.1e-74 282.7 189 74.1
arahy.Tifrunner.gnm1.ann1.072U0I Arachis hypogaea HOM05D005196 ORTHO05D006107 8.3e-72 274.6 236 63.6
CBR_g41628 Chara braunii HOM05D005196 ORTHO05D006107 9.2e-71 271.2 180 72.2
Eucgr.L03318 Eucalyptus grandis HOM05D005196 ORTHO05D006107 2.1e-70 270.0 200 71.0
Cre12.g503550 Chlamydomonas reinhardtii HOM05D005196 ORTHO05D006107 7.8e-70 268.1 194 66.5
EL10Ac5g12833 Beta vulgaris HOM05D005196 ORTHO05D006107 3.3e-68 262.7 239 61.1
PRCOL_00001316 Prasinoderma coloniale HOM05D005196 ORTHO05D006107 3.1e-66 256.1 182 65.4
Dinv37598 Davidia involucrata HOM05D005196 ORTHO05D006107 5.8e-65 251.9 152 80.3
Ah.07g196720 Amaranthus hybridus HOM05D005196 ORTHO05D006107 7.5e-65 251.5 189 69.8
SEGI_11641 Sequoiadendron giganteum HOM05D005196 ORTHO05D006107 1.4e-63 247.3 179 70.4
vmacro11408 Vaccinium macrocarpon HOM05D005196 ORTHO05D006107 3.2e-63 246.1 229 60.7
MCO02G159 Micromonas commoda HOM05D005196 ORTHO05D006107 3.5e-62 242.7 202 60.4
TPR.G6615 Trifolium pratense HOM05D005196 ORTHO05D006107 1.0e-61 241.1 237 57.0
Actinidia28347 Actinidia chinensis HOM05D005196 ORTHO05D006107 1.1e-55 221.1 214 58.9
Atru.chr9.2118 Acer truncatum HOM05D005196 ORTHO05D006107 3.5e-54 216.1 121 86.8
CDE11G0665 Ceratophyllum demersum HOM05D005196 ORTHO05D006107 1.1e-47 194.5 145 69.7
Cfa012243 Carpinus fangiana HOM05D005196 ORTHO05D006107 2.8e-43 179.9 143 64.3
TAR629G0373 Trochodendron aralioides HOM05D005196 ORTHO05D006107 6.2e-43 178.7 123 70.7
BcaC02g10359 Brassica carinata HOM05D005196 ORTHO05D006107 1.4e-42 177.6 103 87.4
C04p29780 Brassica napus HOM05D005196 ORTHO05D006107 1.8e-42 177.2 103 86.4
Sed0007168 Sechium edule HOM05D005196 ORTHO05D006107 5.8e-41 172.2 111 78.4
Psat2g183400 Pisum sativum HOM05D005196 ORTHO05D006107 1.3e-40 171.0 154 57.1
Zm00001eb187250 Zea mays HOM05D005196 ORTHO05D006107 4.9e-40 169.1 151 60.3
Zm00001eb250670 Zea mays HOM05D005196 ORTHO05D006107 7.1e-39 165.2 83 90.4
Gohir.A08G114400 Gossypium hirsutum HOM05D005196 ORTHO05D006107 9.9e-33 144.8 108 71.3
PSO782G0193 Papaver somniferum HOM05D005196 ORTHO05D006107 1.4e-31 141.0 124 59.7
Cfa012242 Carpinus fangiana HOM05D005196 ORTHO05D006107 1.3e-29 134.4 81 81.5
Haze_27119 Corylus avellana HOM05D005196 ORTHO05D006107 3.9e-29 132.9 147 42.2
VMungo0251G1828 Vigna mungo HOM05D005196 ORTHO05D006107 3.9e-29 132.9 77 85.7
AUR62019751 Chenopodium quinoa HOM05D005196 ORTHO05D006107 5.6e-28 129.0 74 85.1
TAR629G1542 Trochodendron aralioides HOM05D005196 ORTHO05D006107 7.4e-28 128.6 86 76.7
CSS0017594 Camellia sinensis var. sinensis HOM05D005196 ORTHO05D006107 4.6e-22 109.4 77 74.0
BolC4t24512H Brassica oleracea HOM05D005196 ORTHO05D006107 9.0e-18 95.1 92 63.0
AagrBONN_evm.TU.Sc2ySwM_344.1771 Anthoceros agrestis HOM05D005196 ORTHO05D006107 3.4e-17 93.2 76 63.2
Gohir.A08G114450 Gossypium hirsutum HOM05D005196 ORTHO05D006107 4.6e-14 82.8 49 81.6
MD06G1092700 Malus domestica HOM05D005196 ORTHO05D006107 4.8e-11 72.8 119 42.0
MD13G1222800 Malus domestica HOM05D005196 ORTHO05D006107 6.9e-10 68.9 47 68.1
A09p15180 Brassica napus HOM05D011356 ORTHO05D013405 3.8e-08 63.2 37 81.1
BcaC08g43708 Brassica carinata HOM05D011356 ORTHO05D013405 6.5e-08 62.4 47 66.0
Cfa023043 Carpinus fangiana HOM05D011356 ORTHO05D013405 1.1e-07 61.6 45 68.9
Aa31csc553G60 Aethionema arabicum HOM05D011356 ORTHO05D013405 3.2e-07 60.1 47 63.8
AL3G44330 Arabidopsis lyrata HOM05D011356 ORTHO05D013405 3.2e-07 60.1 47 63.8
C04p29790 Brassica napus HOM05D005196 ORTHO05D006107 4.2e-07 59.7 28 89.3
BolC4t24513H Brassica oleracea HOM05D005196 ORTHO05D006107 4.2e-07 59.7 28 89.3
BcaC02g10872 Brassica carinata HOM05D011356 ORTHO05D013405 9.4e-07 58.5 40 67.5
Hund14271 Selenicereus undatus HOM05D007428 ORTHO05D009308 4.7e-06 56.2 32 78.1
Psat0s1330g0400 Pisum sativum HOM05D008580 ORTHO05D010833 7.9e-06 55.5 30 83.3


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