Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g18858 Brassica carinata HOM05D001392 ORTHO05D014312 2.0e-69 265.8 144 100.0
Sp6g27440 Schrenkiella parvula HOM05D001392 ORTHO05D006407 8.3e-52 207.2 143 84.6
Thhalv10012577m.g Eutrema salsugineum HOM05D001392 ORTHO05D006407 1.1e-51 206.8 143 83.9
CARHR196470 Cardamine hirsuta HOM05D001392 ORTHO05D006407 1.4e-51 206.5 143 83.9
BcaC04g18859 Brassica carinata HOM05D001392 ORTHO05D006407 1.6e-50 203.0 144 84.0
A10p22510 Brassica napus HOM05D001392 ORTHO05D006407 1.6e-50 203.0 143 83.2
C09p60360 Brassica napus HOM05D001392 ORTHO05D006407 1.6e-50 203.0 144 84.0
BolC9t58869H Brassica oleracea HOM05D001392 ORTHO05D006407 1.6e-50 203.0 144 84.0
BraA10t44310Z Brassica rapa HOM05D001392 ORTHO05D006407 1.6e-50 203.0 143 83.2
Carub.0006s1493 Capsella rubella HOM05D001392 ORTHO05D006407 2.3e-49 199.1 143 81.1
Aa31LG11G12960 Aethionema arabicum HOM05D001392 ORTHO05D006407 1.5e-48 196.4 143 79.0
AT5G16715 Arabidopsis thaliana HOM05D001392 ORTHO05D006407 3.3e-48 195.3 144 80.6
AL6G27720 Arabidopsis lyrata HOM05D001392 ORTHO05D006407 2.8e-47 192.2 144 79.2
THA.LOC104827192 Tarenaya hassleriana HOM05D001392 ORTHO05D006407 6.4e-44 181.0 140 70.0
Atru.chr1.1875 Acer truncatum HOM05D001392 ORTHO05D006407 6.0e-42 174.5 141 68.8
COL.COLO4_09038 Corchorus olitorius HOM05D001392 ORTHO05D006407 5.0e-41 171.4 142 69.7
Hma1.2p1_0524F.1_g172350 Hydrangea macrophylla HOM05D001392 ORTHO05D006407 8.6e-41 170.6 140 70.0
Cpa.g.sc116.46 Carica papaya HOM05D001392 ORTHO05D006407 1.5e-40 169.9 142 68.3
Thecc.04G116700 Theobroma cacao HOM05D001392 ORTHO05D006407 2.5e-40 169.1 142 68.3
Potri.017G124500 Populus trichocarpa HOM05D001392 ORTHO05D006407 5.6e-40 167.9 142 69.0
FAN03G0802 Fragaria x ananassa HOM05D001392 ORTHO05D006407 9.5e-40 167.2 161 61.5
PGR004G0453 Punica granatum HOM05D001392 ORTHO05D006407 1.6e-39 166.4 142 66.2
SalBow5G1075 Salvia bowleyana HOM05D001392 ORTHO05D006407 1.6e-39 166.4 140 65.7
Ciclev10010998m.g Citrus clementina HOM05D001392 ORTHO05D006407 2.1e-39 166.0 142 66.9
Dinv19030 Davidia involucrata HOM05D001392 ORTHO05D006407 2.8e-39 165.6 142 66.9
Migut.D01299 Erythranthe guttata HOM05D001392 ORTHO05D006407 2.8e-39 165.6 142 64.8
GSVIVG01027222001 Vitis vinifera HOM05D001392 ORTHO05D006407 3.6e-39 165.2 142 65.5
Manes.02G076200 Manihot esculenta HOM05D001392 ORTHO05D006407 1.1e-38 163.7 142 65.5
MSTRG.4620 Avicennia marina HOM05D001392 ORTHO05D006407 1.4e-38 163.3 142 64.1
HanXRQChr10g0283681 Helianthus annuus HOM05D001392 ORTHO05D006407 1.4e-38 163.3 142 64.8
Duzib133G1570 Durio zibethinus HOM05D001392 ORTHO05D006407 1.8e-38 162.9 142 65.5
SGA_v2.0_scaffold40G15632 Striga asiatica HOM05D001392 ORTHO05D006407 4.0e-38 161.8 142 64.1
Actinidia35731 Actinidia chinensis HOM05D001392 ORTHO05D006407 1.5e-37 159.8 138 63.0
Gohir.A10G243050 Gossypium hirsutum HOM05D001392 ORTHO05D006407 1.5e-37 159.8 140 65.7
GSVIVG01030775001 Vitis vinifera HOM05D001392 ORTHO05D006407 1.5e-37 159.8 142 63.4
CSS0004873 Camellia sinensis var. sinensis HOM05D001392 ORTHO05D006407 2.0e-37 159.5 143 64.3
CSS0005968 Camellia sinensis var. sinensis HOM05D001392 ORTHO05D006407 2.0e-37 159.5 143 64.3
Ca_25679_v3 Cicer arietinum L. HOM05D001392 ORTHO05D006407 2.0e-37 159.5 142 65.5
Os07g0163500 Oryza sativa ssp. japonica HOM05D001392 ORTHO05D006407 2.0e-37 159.5 136 65.4
RcHm_v2.0_Chr1g0328051 Rosa chinensis HOM05D001392 ORTHO05D006407 2.0e-37 159.5 143 62.9
TPR.G35631 Trifolium pratense HOM05D001392 ORTHO05D006407 2.6e-37 159.1 142 64.1
Zm00001eb117220 Zea mays HOM05D001392 ORTHO05D006407 2.6e-37 159.1 136 64.0
MBI11_g24566_MAGBIO Magnolia biondii HOM05D001392 ORTHO05D006407 3.4e-37 158.7 146 63.7
arahy.Tifrunner.gnm1.ann1.0T11RW Arachis hypogaea HOM05D001392 ORTHO05D006407 9.9e-37 157.1 142 64.1
ECA246G3910 Erigeron canadensis HOM05D001392 ORTHO05D006407 1.3e-36 156.8 142 63.4
Glyma.17G186800 Glycine max HOM05D001392 ORTHO05D006407 1.3e-36 156.8 142 64.8
Lalb_Chr14g0364821 Lupinus albus HOM05D001392 ORTHO05D006407 1.3e-36 156.8 141 63.8
Medtr6g027620 Medicago truncatula HOM05D001392 ORTHO05D006407 1.3e-36 156.8 142 64.8
Nitab4.5_0003197g0040 Nicotiana tabacum HOM05D001392 ORTHO05D006407 1.3e-36 156.8 142 62.7
Psat1g089800 Pisum sativum HOM05D001392 ORTHO05D006407 1.7e-36 156.4 142 64.1
FvH4_7g04130 Fragaria vesca HOM05D001392 ORTHO05D006407 2.2e-36 156.0 141 63.8
Sopen12g009300 Solanum pennellii HOM05D001392 ORTHO05D006407 2.2e-36 156.0 142 61.3
CiPaw.09G167000 Carya illinoinensis HOM05D001392 ORTHO05D006407 3.7e-36 155.2 142 62.7
Hma1.2p1_0524F.1_g172370 Hydrangea macrophylla HOM05D001392 ORTHO05D014312 3.7e-36 155.2 103 81.6
Phvul.004G073700 Phaseolus vulgaris HOM05D001392 ORTHO05D006407 4.9e-36 154.8 142 62.7
Sabra17G0105100 Salix brachista HOM05D001392 ORTHO05D006407 6.4e-36 154.5 140 65.0
Gohir.A08G253800 Gossypium hirsutum HOM05D001392 ORTHO05D006407 8.3e-36 154.1 142 62.0
Lj2g0008629 Lotus japonicus HOM05D001392 ORTHO05D006407 1.4e-35 153.3 142 62.7
Aqoxy2G00612 Aquilegia oxysepala HOM05D001392 ORTHO05D006407 1.9e-35 152.9 142 62.0
Solyc12g019110.3 Solanum lycopersicum HOM05D001392 ORTHO05D006407 1.9e-35 152.9 142 60.6
QL07p019084 Quercus lobata HOM05D001392 ORTHO05D006407 3.2e-35 152.1 141 62.4
TWI74G1301 Tripterygium wilfordii HOM05D001392 ORTHO05D006407 4.1e-35 151.8 138 65.2
unitig_749.g13792 Utricularia gibba HOM05D001392 ORTHO05D006407 4.1e-35 151.8 136 60.3
Hund13115 Selenicereus undatus HOM05D001392 ORTHO05D006407 7.1e-35 151.0 141 60.3
Hma1.2p1_1840F.1_g304940 Hydrangea macrophylla HOM05D001392 ORTHO05D014312 1.2e-34 150.2 102 79.4
VMungo0464G0907 Vigna mungo HOM05D001392 ORTHO05D006407 1.2e-34 150.2 134 63.4
CANSAT71G0007 Cannabis sativa HOM05D001392 ORTHO05D006407 2.7e-34 149.1 142 59.9
PSO339G4038 Papaver somniferum HOM05D001392 ORTHO05D006407 3.5e-34 148.7 140 60.7
Rhsim08G0018500 Rhododendron simsii HOM05D001392 ORTHO05D006407 4.6e-34 148.3 105 74.3
CAN.G207.6 Capsicum annuum HOM05D001392 ORTHO05D006407 7.8e-34 147.5 135 60.0
CDE10G1341 Ceratophyllum demersum HOM05D001392 ORTHO05D006407 1.0e-33 147.1 141 61.7
Sed0009589 Sechium edule HOM05D001392 ORTHO05D006407 1.0e-33 147.1 136 60.3
Lsat_1_v5_gn_3_65141 Lactuca sativa HOM05D001392 ORTHO05D006407 1.3e-33 146.7 138 60.1
CsaV3_3G020830 Cucumis sativus L. HOM05D001392 ORTHO05D006407 1.7e-33 146.4 136 61.8
DCAR_003434 Daucus carota HOM05D001392 ORTHO05D006407 3.0e-33 145.6 142 58.5
Cfa017719 Carpinus fangiana HOM05D001392 ORTHO05D006407 6.6e-33 144.4 142 60.6
vmacro18535 Vaccinium macrocarpon HOM05D001392 ORTHO05D006407 6.6e-33 144.4 105 72.4
Nitab4.5_0001206g0010 Nicotiana tabacum HOM05D001392 ORTHO05D014312 1.5e-32 143.3 105 72.4
PSO384G0294 Papaver somniferum HOM05D001392 ORTHO05D006407 2.5e-32 142.5 140 58.6
EL10Ac2g03165 Beta vulgaris HOM05D001392 ORTHO05D006407 4.3e-32 141.7 142 57.7
ClCG05G011510 Citrullus lanatus HOM05D001392 ORTHO05D006407 4.3e-32 141.7 169 53.3
Ah.12g060150 Amaranthus hybridus HOM05D001392 ORTHO05D006407 5.6e-32 141.4 142 56.3
Gohir.A12G276975 Gossypium hirsutum HOM05D001392 ORTHO05D014312 1.2e-31 140.2 149 57.0
MD17G1258800 Malus domestica HOM05D001392 ORTHO05D014312 1.2e-31 140.2 161 54.0
Actinidia28813 Actinidia chinensis HOM05D001392 ORTHO05D014312 1.6e-31 139.8 104 69.2
Gohir.D10G255000 Gossypium hirsutum HOM05D001392 ORTHO05D006407 1.6e-31 139.8 105 71.4
Gorai.011G296000 Gossypium raimondii HOM05D001392 ORTHO05D006407 1.6e-31 139.8 142 60.6
ATR0697G119 Amborella trichopoda HOM05D001392 ORTHO05D006407 2.4e-30 136.0 142 55.6
Peaxi162Scf00057g02723 Petunia axillaris HOM05D001392 ORTHO05D014312 5.2e-30 134.8 99 71.7
FAN13G1017 Fragaria x ananassa HOM05D001392 ORTHO05D006407 1.5e-29 133.3 153 55.6
MELO3C020199.2 Cucumis melo HOM05D001392 ORTHO05D006407 9.9e-29 130.6 107 63.6
Gohir.D07G000800 Gossypium hirsutum HOM05D001392 ORTHO05D014312 1.3e-28 130.2 117 62.4
Haze_20419 Corylus avellana HOM05D001392 ORTHO05D006407 2.2e-28 129.4 159 52.2
MD09G1264300 Malus domestica HOM05D001392 ORTHO05D014312 3.8e-28 128.6 97 69.1
Gorai.007G000600 Gossypium raimondii HOM05D001392 ORTHO05D014312 7.8e-26 120.9 83 74.7
Gorai.008G298900 Gossypium raimondii HOM05D001392 ORTHO05D014312 7.8e-26 120.9 83 74.7
MD05G1034800 Malus domestica HOM05D001392 ORTHO05D006407 1.0e-25 120.6 151 50.3
Oeu023509.1 Olea europaea HOM05D001392 ORTHO05D006407 8.7e-25 117.5 142 52.8
SEGI_33021 Sequoiadendron giganteum HOM05D001392 ORTHO05D014312 3.6e-23 112.1 105 58.1
Eucgr.F02848 Eucalyptus grandis HOM05D001392 ORTHO05D006407 6.2e-23 111.3 99 61.6
Pp3c12_13790 Physcomitrium patens HOM05D001392 ORTHO05D006407 2.4e-22 109.4 140 45.7
Gohir.D01G222000 Gossypium hirsutum HOM05D001392 ORTHO05D006407 2.0e-21 106.3 99 61.6
Gorai.002G268700 Gossypium raimondii HOM05D001392 ORTHO05D006407 2.0e-21 106.3 99 61.6
Mapoly0040s0139 Marchantia polymorpha HOM05D001392 ORTHO05D006407 2.0e-21 106.3 138 43.5
Nn7g38289 Nelumbo nucifera HOM05D001392 ORTHO05D006407 6.4e-20 101.3 101 56.4
AUR62018211 Chenopodium quinoa HOM05D001392 ORTHO05D006407 2.1e-18 96.3 100 56.0
AUR62038699 Chenopodium quinoa HOM05D001392 ORTHO05D014312 3.5e-18 95.5 100 56.0
MCO14G022 Micromonas commoda HOM05D001392 ORTHO05D006407 1.2e-10 70.5 93 41.9


User provided reference genes

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