Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09855 Brassica carinata HOM05D003763 ORTHO05D004315 1.3e-80 303.1 167 100.0
C04p35880 Brassica napus HOM05D003763 ORTHO05D004315 6.7e-53 211.1 169 80.5
BcaNung01019 Brassica carinata HOM05D003763 ORTHO05D004315 3.5e-46 188.7 169 71.6
A01p14110 Brassica napus HOM05D003763 ORTHO05D004315 2.3e-45 186.0 172 70.9
BraA01t01359Z Brassica rapa HOM05D003763 ORTHO05D004315 2.3e-45 186.0 172 70.9
BcaC09g51065 Brassica carinata HOM05D003763 ORTHO05D004315 3.0e-45 185.7 172 70.3
C01p17370 Brassica napus HOM05D003763 ORTHO05D004315 1.5e-44 183.3 172 69.8
BolC1t01675H Brassica oleracea HOM05D003763 ORTHO05D004315 1.5e-44 183.3 172 69.8
A03p53850 Brassica napus HOM05D003763 ORTHO05D004315 7.4e-44 181.0 171 69.6
Sp7g20960 Schrenkiella parvula HOM05D003763 ORTHO05D004315 2.8e-43 179.1 175 68.0
C07p52250 Brassica napus HOM05D003763 ORTHO05D004315 4.8e-43 178.3 171 68.4
BolC7t45719H Brassica oleracea HOM05D003763 ORTHO05D004315 3.1e-42 175.6 171 67.8
BraA03t14454Z Brassica rapa HOM05D003763 ORTHO05D004315 9.0e-42 174.1 171 67.8
Thhalv10025739m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 3.8e-40 168.7 172 65.7
AT4G22890 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 5.0e-40 168.3 175 64.0
BolC4t25212H Brassica oleracea HOM05D003763 ORTHO05D004315 2.1e-38 162.9 82 96.3
THA.LOC104814132 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 1.3e-35 153.7 174 61.5
Aa31LG6G4960 Aethionema arabicum HOM05D003763 ORTHO05D004315 1.7e-35 153.3 178 59.6
BcaB01g02662 Brassica carinata HOM05D003763 ORTHO05D004315 2.8e-35 152.5 170 61.8
A03p29510 Brassica napus HOM05D003763 ORTHO05D004315 3.7e-35 152.1 169 62.1
BraA03t12145Z Brassica rapa HOM05D003763 ORTHO05D004315 3.7e-35 152.1 169 62.1
Sp6g05550 Schrenkiella parvula HOM05D003763 ORTHO05D004315 6.3e-35 151.4 176 60.8
BolC3t15881H Brassica oleracea HOM05D003763 ORTHO05D004315 8.2e-35 151.0 169 61.5
Carub.0007s1839 Capsella rubella HOM05D003763 ORTHO05D004315 1.4e-34 150.2 173 62.4
BcaC01g04611 Brassica carinata HOM05D003763 ORTHO05D004315 1.8e-34 149.8 169 60.9
C03p35720 Brassica napus HOM05D003763 ORTHO05D004315 1.8e-34 149.8 169 60.9
Thhalv10028695m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 4.1e-34 148.7 178 59.0
AT4G11960 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 6.9e-34 147.9 169 61.5
AL6G46730 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 9.1e-34 147.5 168 60.7
BcaNung01664 Brassica carinata HOM05D003763 ORTHO05D004315 1.3e-32 143.7 145 66.9
THA.LOC104806356 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 1.3e-32 143.7 174 59.8
Aa31LG9G10510 Aethionema arabicum HOM05D003763 ORTHO05D004315 5.0e-32 141.7 176 56.2
CARHR254330 Cardamine hirsuta HOM05D003763 ORTHO05D004315 5.0e-32 141.7 169 60.9
Carub.0006s3106 Capsella rubella HOM05D003763 ORTHO05D004315 5.5e-31 138.3 170 58.2
CARHR229930 Cardamine hirsuta HOM05D003763 ORTHO05D004315 3.9e-29 132.1 172 57.6
COL.COLO4_23800 Corchorus olitorius HOM05D003763 ORTHO05D004315 1.7e-27 126.7 173 55.5
Psat4g068320 Pisum sativum HOM05D003763 ORTHO05D004315 4.8e-27 125.2 163 55.8
TWI60G0957 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 2.0e-25 119.8 176 55.1
TWI81G0532 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 7.7e-25 117.9 176 54.0
GSVIVG01019890001 Vitis vinifera HOM05D003763 ORTHO05D004315 1.0e-24 117.5 177 52.5
Cpa.g.sc29.40 Carica papaya HOM05D003763 ORTHO05D004315 1.3e-24 117.1 170 51.2
Dinv37708 Davidia involucrata HOM05D003763 ORTHO05D004315 2.9e-24 115.9 178 52.2
Thecc.03G267900 Theobroma cacao HOM05D003763 ORTHO05D004315 2.9e-24 115.9 170 52.9
Ciclev10021127m.g Citrus clementina HOM05D003763 ORTHO05D004315 3.8e-24 115.5 169 53.8
CSS0018103 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 6.5e-24 114.8 178 51.1
TPR.G37646 Trifolium pratense HOM05D003763 ORTHO05D004315 6.5e-24 114.8 171 51.5
Gohir.D08G195200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 8.5e-24 114.4 171 52.6
Sed0026462 Sechium edule HOM05D003763 ORTHO05D004315 1.1e-23 114.0 158 55.1
Hund14702 Selenicereus undatus HOM05D003763 ORTHO05D004315 1.1e-23 114.0 156 53.8
Dinv39038 Davidia involucrata HOM05D003763 ORTHO05D004315 1.4e-23 113.6 145 56.6
Duzib205G0169 Durio zibethinus HOM05D003763 ORTHO05D004315 2.5e-23 112.8 170 53.5
Lsat_1_v5_gn_6_78800 Lactuca sativa HOM05D003763 ORTHO05D004315 2.5e-23 112.8 158 54.4
Lsat_1_v5_gn_6_8180 Lactuca sativa HOM05D003763 ORTHO05D004315 2.5e-23 112.8 169 54.4
Duzib084G0949 Durio zibethinus HOM05D003763 ORTHO05D004315 3.2e-23 112.5 170 52.9
Phvul.003G213900 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 3.2e-23 112.5 149 56.4
MSTRG.12034 Avicennia marina HOM05D003763 ORTHO05D004315 4.2e-23 112.1 143 55.2
Manes.01G070000 Manihot esculenta HOM05D003763 ORTHO05D004315 4.2e-23 112.1 169 54.4
CSS0001568 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 7.2e-23 111.3 177 51.4
ClCG00G000150 Citrullus lanatus HOM05D003763 ORTHO05D004315 7.2e-23 111.3 156 55.1
ClCG00G002290 Citrullus lanatus HOM05D003763 ORTHO05D004315 7.2e-23 111.3 156 55.1
ClCG10G003400 Citrullus lanatus HOM05D003763 ORTHO05D004315 7.2e-23 111.3 156 55.1
Lj4g0003870 Lotus japonicus HOM05D003763 ORTHO05D004315 7.2e-23 111.3 163 53.4
EL10Ac5g12684 Beta vulgaris HOM05D003763 ORTHO05D004315 9.4e-23 110.9 142 54.2
Oeu056817.1 Olea europaea HOM05D003763 ORTHO05D004315 9.4e-23 110.9 144 54.9
Aqoxy7G00504 Aquilegia oxysepala HOM05D003763 ORTHO05D004315 1.2e-22 110.5 176 49.4
arahy.Tifrunner.gnm1.ann1.N69HTX Arachis hypogaea HOM05D003763 ORTHO05D004315 1.2e-22 110.5 149 57.7
arahy.Tifrunner.gnm1.ann1.QN4KPS Arachis hypogaea HOM05D003763 ORTHO05D004315 1.2e-22 110.5 149 57.7
CsaV3_3G003430 Cucumis sativus L. HOM05D003763 ORTHO05D004315 1.2e-22 110.5 159 55.3
unitig_52.g17229 Utricularia gibba HOM05D003763 ORTHO05D004315 1.2e-22 110.5 177 51.4
Ca_20236_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 1.6e-22 110.2 147 56.5
Glyma.17G133200 Glycine max HOM05D003763 ORTHO05D004315 1.6e-22 110.2 149 56.4
Cfa012069 Carpinus fangiana HOM05D003763 ORTHO05D004315 2.1e-22 109.8 157 56.1
Gorai.004G206000 Gossypium raimondii HOM05D003763 ORTHO05D004315 2.1e-22 109.8 177 49.7
ECA240G4155 Erigeron canadensis HOM05D003763 ORTHO05D004315 2.7e-22 109.4 146 55.5
Haze_08989 Corylus avellana HOM05D003763 ORTHO05D004315 3.6e-22 109.0 157 55.4
Medtr4g102440 Medicago truncatula HOM05D003763 ORTHO05D004315 4.7e-22 108.6 159 54.1
TAR629G0773 Trochodendron aralioides HOM05D003763 ORTHO05D004315 4.7e-22 108.6 157 52.9
CDE07G1747 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 6.1e-22 108.2 140 56.4
SalBow6G0972 Salvia bowleyana HOM05D003763 ORTHO05D004315 6.1e-22 108.2 137 58.4
MELO3C014009.2 Cucumis melo HOM05D003763 ORTHO05D004315 8.0e-22 107.8 158 55.1
Nn1g01278 Nelumbo nucifera HOM05D003763 ORTHO05D004315 1.0e-21 107.5 168 50.0
Peaxi162Scf00620g00056 Petunia axillaris HOM05D003763 ORTHO05D004315 1.0e-21 107.5 144 55.6
TAR622G0836 Trochodendron aralioides HOM05D003763 ORTHO05D004315 1.0e-21 107.5 171 49.7
Glyma.05G051300 Glycine max HOM05D003763 ORTHO05D004315 1.4e-21 107.1 149 55.0
CDE04G2291 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 2.3e-21 106.3 140 55.7
CANSAT21G0452 Cannabis sativa HOM05D003763 ORTHO05D004315 3.0e-21 105.9 167 51.5
Migut.E01022 Erythranthe guttata HOM05D003763 ORTHO05D004315 3.0e-21 105.9 157 51.6
Migut.E01271 Erythranthe guttata HOM05D003763 ORTHO05D004315 3.0e-21 105.9 157 51.6
Ah.12g057870 Amaranthus hybridus HOM05D003763 ORTHO05D004315 5.2e-21 105.1 145 54.5
FAN04G0845 Fragaria x ananassa HOM05D003763 ORTHO05D004315 5.2e-21 105.1 157 52.9
Oeu021144.1 Olea europaea HOM05D003763 ORTHO05D004315 5.2e-21 105.1 173 47.4
Atru.chr9.1500 Acer truncatum HOM05D003763 ORTHO05D004315 6.7e-21 104.8 174 50.0
CiPaw.11G143200 Carya illinoinensis HOM05D003763 ORTHO05D004315 6.7e-21 104.8 145 55.9
DCAR_000890 Daucus carota HOM05D003763 ORTHO05D004315 6.7e-21 104.8 141 56.0
Lalb_Chr05g0214701 Lupinus albus HOM05D003763 ORTHO05D004315 6.7e-21 104.8 164 51.8
MSTRG.13805 Avicennia marina HOM05D003763 ORTHO05D004315 8.8e-21 104.4 139 55.4
Sc22g0000420 Simmondsia chinensis HOM05D003763 ORTHO05D004315 8.8e-21 104.4 176 50.6
VMungo1215G1438 Vigna mungo HOM05D003763 ORTHO05D004315 8.8e-21 104.4 139 54.7
Gorai.008G242200 Gossypium raimondii HOM05D003763 ORTHO05D004315 1.1e-20 104.0 172 50.0
Hma1.2p1_0138F.1_g062780 Hydrangea macrophylla HOM05D003763 ORTHO05D004315 1.1e-20 104.0 185 49.7
Nitab4.5_0002886g0120 Nicotiana tabacum HOM05D003763 ORTHO05D004315 1.1e-20 104.0 145 44.1
Nitab4.5_0010547g0050 Nicotiana tabacum HOM05D003763 ORTHO05D004315 1.1e-20 104.0 143 56.6
Phvul.002G152800 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 1.1e-20 104.0 138 55.1
Gohir.D12G226200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 1.5e-20 103.6 172 50.0
AUR62010559 Chenopodium quinoa HOM05D003763 ORTHO05D004315 2.0e-20 103.2 176 48.9
FAN08G0919 Fragaria x ananassa HOM05D003763 ORTHO05D004315 2.0e-20 103.2 157 52.2
HanXRQChr03g0084111 Helianthus annuus HOM05D003763 ORTHO05D004315 2.0e-20 103.2 148 52.0
Potri.001G113000 Populus trichocarpa HOM05D003763 ORTHO05D004315 2.0e-20 103.2 169 50.3
vmacro14015 Vaccinium macrocarpon HOM05D003763 ORTHO05D004315 2.0e-20 103.2 168 50.6
Migut.A00895 Erythranthe guttata HOM05D003763 ORTHO05D004315 2.6e-20 102.8 170 50.6
HanXRQChr13g0414021 Helianthus annuus HOM05D003763 ORTHO05D004315 2.6e-20 102.8 157 53.5
FAN13G2490 Fragaria x ananassa HOM05D003763 ORTHO05D004315 3.3e-20 102.4 157 52.2
CAN.G981.62 Capsicum annuum HOM05D003763 ORTHO05D004315 4.4e-20 102.1 143 52.4
CiPaw.12G101000 Carya illinoinensis HOM05D003763 ORTHO05D004315 4.4e-20 102.1 171 50.9
Eucgr.D01944 Eucalyptus grandis HOM05D003763 ORTHO05D004315 4.4e-20 102.1 188 46.8
MD04G1071000 Malus domestica HOM05D003763 ORTHO05D004315 4.4e-20 102.1 159 51.6
CAN.G1394.10 Capsicum annuum HOM05D003763 ORTHO05D004315 5.7e-20 101.7 170 48.8
FvH4_5g01180 Fragaria vesca HOM05D003763 ORTHO05D004315 5.7e-20 101.7 157 51.6
FAN18G3786 Fragaria x ananassa HOM05D003763 ORTHO05D004315 5.7e-20 101.7 157 51.6
Glyma.01G214300 Glycine max HOM05D003763 ORTHO05D004315 5.7e-20 101.7 157 52.2
unitig_699.g19760 Utricularia gibba HOM05D003763 ORTHO05D004315 5.7e-20 101.7 138 54.3
AUR62017330 Chenopodium quinoa HOM05D003763 ORTHO05D004315 1.7e-19 100.1 176 48.3
Ca_24565_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 1.7e-19 100.1 170 49.4
PGSC0003DMG400022731 Solanum tuberosum HOM05D003763 ORTHO05D004315 1.7e-19 100.1 161 50.3
Psat2g180880 Pisum sativum HOM05D003763 ORTHO05D004315 2.2e-19 99.8 150 53.3
PGSC0003DMG400012494 Solanum tuberosum HOM05D003763 ORTHO05D004315 2.2e-19 99.8 145 53.1
Medtr5g011220 Medicago truncatula HOM05D003763 ORTHO05D004315 2.8e-19 99.4 146 53.4
Sopen08g028400 Solanum pennellii HOM05D003763 ORTHO05D004315 6.3e-19 98.2 161 49.1
Solyc08g007770.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 8.2e-19 97.8 170 48.8
Solyc08g080050.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 8.2e-19 97.8 161 49.1
Sed0016409 Sechium edule HOM05D003763 ORTHO05D004315 1.1e-18 97.4 164 49.4
arahy.Tifrunner.gnm1.ann1.RZ3A35 Arachis hypogaea HOM05D003763 ORTHO05D004315 1.4e-18 97.1 147 51.0
Prupe.5G086900 Prunus persica HOM05D003763 ORTHO05D004315 1.4e-18 97.1 146 53.4
RcHm_v2.0_Chr7g0199911 Rosa chinensis HOM05D003763 ORTHO05D004315 1.4e-18 97.1 158 53.2
Sopen08g003700 Solanum pennellii HOM05D003763 ORTHO05D004315 1.4e-18 97.1 145 51.7
Cc08_g13730 Coffea canephora HOM05D003763 ORTHO05D004315 1.8e-18 96.7 163 51.5
PSO478G4698 Papaver somniferum HOM05D003763 ORTHO05D004315 1.8e-18 96.7 139 52.5
PSO782G5713 Papaver somniferum HOM05D003763 ORTHO05D004315 1.8e-18 96.7 176 45.5
Peaxi162Scf00102g01354 Petunia axillaris HOM05D003763 ORTHO05D004315 2.4e-18 96.3 145 51.7
VMungo1215G3348 Vigna mungo HOM05D003763 ORTHO05D004315 3.1e-18 95.9 179 45.3
Sabra03G0083200 Salix brachista HOM05D003763 ORTHO05D004315 5.3e-18 95.1 146 52.1
Rhsim07G0096500 Rhododendron simsii HOM05D003763 ORTHO05D004315 9.1e-18 94.4 163 48.5
Potri.003G119200 Populus trichocarpa HOM05D003763 ORTHO05D004315 1.2e-17 94.0 175 48.0
arahy.Tifrunner.gnm1.ann1.HFU20B Arachis hypogaea HOM05D003763 ORTHO05D004315 1.6e-17 93.6 147 51.0
SEGI_18243 Sequoiadendron giganteum HOM05D003763 ORTHO05D004315 3.5e-17 92.4 161 46.6
Zm00001eb064990 Zea mays HOM05D003763 ORTHO05D004315 3.5e-17 92.4 150 52.0
SalBow1G0491 Salvia bowleyana HOM05D003763 ORTHO05D004315 4.5e-17 92.0 144 51.4
Actinidia14012 Actinidia chinensis HOM05D003763 ORTHO05D004315 7.7e-17 91.3 117 60.7
HPP92_014954 Vanilla planifolia HOM05D003763 ORTHO05D004315 7.7e-17 91.3 101 52.5
Gohir.A12G223566 Gossypium hirsutum HOM05D003763 ORTHO05D004315 1.0e-16 90.9 127 46.5
C07p59320 Brassica napus HOM05D003763 ORTHO05D102539 1.3e-16 90.5 161 42.9
ATR0661G459 Amborella trichopoda HOM05D003763 ORTHO05D004315 2.2e-16 89.7 130 54.6
Os03g0857400 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 3.8e-16 89.0 129 55.8
TPR.G14577 Trifolium pratense HOM05D003763 ORTHO05D004315 3.8e-16 89.0 77 70.1
Lj2g0000892 Lotus japonicus HOM05D003763 ORTHO05D004315 8.5e-16 87.8 153 49.7
Lj2A202G55 Lonicera japonica HOM05D003763 ORTHO05D004315 1.2e-14 84.0 125 47.2
Pp3c10_15390 Physcomitrium patens HOM05D003763 ORTHO05D004315 1.2e-14 84.0 116 55.2
AagrBONN_evm.TU.Sc2ySwM_362.2619 Anthoceros agrestis HOM05D003763 ORTHO05D004315 1.6e-14 83.6 118 45.8
AL7G30630 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 2.1e-14 83.2 77 77.9
Mapoly0048s0082 Marchantia polymorpha HOM05D003763 ORTHO05D004315 2.1e-14 83.2 126 51.6
Nitab4.5_0003274g0090 Nicotiana tabacum HOM05D003763 ORTHO05D004315 2.1e-14 83.2 156 39.7
PGR031G0886 Punica granatum HOM05D003763 ORTHO05D004315 2.1e-14 83.2 120 55.0
Actinidia27416 Actinidia chinensis HOM05D003763 ORTHO05D004315 3.6e-14 82.4 117 58.1
Nitab4.5_0001200g0070 Nicotiana tabacum HOM05D003763 ORTHO05D004315 4.7e-14 82.0 124 43.5
Lj8C243T4 Lonicera japonica HOM05D003763 ORTHO05D004315 8.0e-14 81.3 118 57.6
Actinidia05236 Actinidia chinensis HOM05D003763 ORTHO05D004315 1.8e-13 80.1 119 42.9
SMO356G0021 Selaginella moellendorffii HOM05D003763 ORTHO05D004315 2.3e-13 79.7 128 37.5
Os08g0526300 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 4.0e-13 79.0 75 73.3
Gohir.A08G176900 Gossypium hirsutum HOM05D003763 ORTHO05D004315 2.6e-12 76.3 77 74.0
Zm00001eb305640 Zea mays HOM05D003763 ORTHO05D004315 7.5e-12 74.7 78 52.6
Lsat_1_v5_gn_8_1701 Lactuca sativa HOM05D003763 ORTHO05D004315 9.7e-12 74.3 81 51.9
Psat6g136800 Pisum sativum HOM05D003763 ORTHO05D004315 1.3e-11 73.9 75 74.7
Cre07.g340200 Chlamydomonas reinhardtii HOM05D003763 ORTHO05D004315 1.3e-08 63.9 148 39.9
Zm00001eb065020 Zea mays HOM05D003763 ORTHO05D004315 5.0e-08 62.0 76 48.7
Pp3c3_19870 Physcomitrium patens HOM05D003763 ORTHO05D004315 1.9e-07 60.1 80 60.0


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