Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g07291 Brassica carinata HOM05D000037 ORTHO05D095033 6.2e-48 193.7 94 100.0
BolC4t28424H Brassica oleracea HOM05D000037 ORTHO05D000648 5.3e-39 164.1 80 100.0
A04p31830 Brassica napus HOM05D000037 ORTHO05D000648 1.5e-38 162.5 80 98.8
BraA04t18641Z Brassica rapa HOM05D000037 ORTHO05D000648 1.5e-38 162.5 80 98.8
C04p69240 Brassica napus HOM05D000037 ORTHO05D000648 9.9e-38 159.8 80 98.8
BcaB06g29208 Brassica carinata HOM05D000037 ORTHO05D000648 9.9e-30 133.3 80 83.8
BcaNung02845 Brassica carinata HOM05D000037 ORTHO05D000648 9.9e-30 133.3 80 83.8
Sp4g24120 Schrenkiella parvula HOM05D000037 ORTHO05D000648 1.4e-28 129.4 80 81.2
A05p02590 Brassica napus HOM05D000037 ORTHO05D000648 9.3e-28 126.7 82 78.0
BraA05t19252Z Brassica rapa HOM05D000037 ORTHO05D000648 9.3e-28 126.7 82 78.0
BcaC02g12487 Brassica carinata HOM05D000037 ORTHO05D000648 1.8e-26 122.5 82 75.6
C04p03040 Brassica napus HOM05D000037 ORTHO05D000648 1.8e-26 122.5 82 75.6
BolC4t21946H Brassica oleracea HOM05D000037 ORTHO05D000648 1.8e-26 122.5 82 75.6
CARHR136940 Cardamine hirsuta HOM05D000037 ORTHO05D000648 3.0e-26 121.7 80 70.0
Thhalv10016680m.g Eutrema salsugineum HOM05D000037 ORTHO05D000648 1.5e-25 119.4 80 71.2
AT2G41850 Arabidopsis thaliana HOM05D000037 ORTHO05D000648 1.1e-23 113.2 80 70.0
AL4G40180 Arabidopsis lyrata HOM05D000037 ORTHO05D000648 1.0e-21 106.7 80 65.0
Carub.0004s2415 Capsella rubella HOM05D000037 ORTHO05D000648 9.3e-20 100.1 74 68.9
Thhalv10005982m.g Eutrema salsugineum HOM05D000037 ORTHO05D000648 8.8e-10 67.0 79 48.1
C08p33040 Brassica napus HOM05D000037 ORTHO05D000648 1.1e-09 66.6 82 50.0
BolC8t50904H Brassica oleracea HOM05D000037 ORTHO05D000648 1.1e-09 66.6 82 50.0
CARHR167730 Cardamine hirsuta HOM05D000037 ORTHO05D000648 1.5e-09 66.2 82 50.0
A09p50370 Brassica napus HOM05D000037 ORTHO05D000648 2.0e-09 65.9 82 50.0
BraA09t40489Z Brassica rapa HOM05D000037 ORTHO05D000648 2.0e-09 65.9 82 50.0
AL5G39090 Arabidopsis lyrata HOM05D000037 ORTHO05D000648 2.5e-09 65.5 82 51.2
BcaB02g08313 Brassica carinata HOM05D000037 ORTHO05D000648 4.3e-09 64.7 83 50.6
BcaC07g40374 Brassica carinata HOM05D000037 ORTHO05D000648 4.3e-09 64.7 83 51.8
Aa31LG10G12340 Aethionema arabicum HOM05D000037 ORTHO05D000648 1.3e-08 63.2 69 50.7
Sp5g05090 Schrenkiella parvula HOM05D000037 ORTHO05D000648 1.7e-08 62.8 82 48.8
BcaNung02843 Brassica carinata HOM05D000037 ORTHO05D000648 1.8e-07 59.3 42 73.8
AT3G57510 Arabidopsis thaliana HOM05D000037 ORTHO05D000648 3.1e-07 58.5 82 47.6
Carub.0005s2435 Capsella rubella HOM05D000037 ORTHO05D000648 9.1e-07 57.0 83 44.6
BcaC08g44850 Brassica carinata HOM05D000037 ORTHO05D000648 2.0e-06 55.8 83 47.0
C06p24570 Brassica napus HOM05D000037 ORTHO05D000648 2.0e-06 55.8 83 47.0
BolC6t37605H Brassica oleracea HOM05D000037 ORTHO05D000648 2.0e-06 55.8 83 47.0
BraA07t30008Z Brassica rapa HOM05D000037 ORTHO05D000648 2.6e-06 55.5 68 50.0
A07p23460 Brassica napus HOM05D000037 ORTHO05D000648 4.5e-06 54.7 83 45.8


User provided reference genes

Program Settings