Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02790 Brassica carinata HOM05D005381 ORTHO05D006674 1.5e-308 1062.0 528 100.0
BcaC01g02789 Brassica carinata HOM05D005381 ORTHO05D006674 5.3e-229 797.7 508 84.1
BolC3t18293H Brassica oleracea HOM05D005381 ORTHO05D006674 2.5e-223 778.9 472 87.5
BolC3t18296H Brassica oleracea HOM05D005381 ORTHO05D006674 1.2e-220 770.0 522 80.8
BcaC01g02792 Brassica carinata HOM05D005381 ORTHO05D006674 4.2e-202 708.4 502 76.3
C03p60390 Brassica napus HOM05D005381 ORTHO05D006674 4.1e-197 691.8 423 86.1
BraA07t29607Z Brassica rapa HOM05D005381 ORTHO05D006674 2.4e-173 612.8 596 61.1
A07p19020 Brassica napus HOM05D005381 ORTHO05D006674 4.1e-173 612.1 593 61.2
C04p22930 Brassica napus HOM05D005381 ORTHO05D006674 7.7e-172 607.8 601 60.2
BolC4t23787H Brassica oleracea HOM05D005381 ORTHO05D006674 1.3e-171 607.1 603 60.0
Thhalv10016347m.g Eutrema salsugineum HOM05D005381 ORTHO05D006674 2.1e-169 599.7 606 59.4
Sp4g11270 Schrenkiella parvula HOM05D005381 ORTHO05D006674 8.0e-169 597.8 597 59.0
AL4G21570 Arabidopsis lyrata HOM05D005381 ORTHO05D006674 1.7e-142 510.4 614 50.5
CARHR121390 Cardamine hirsuta HOM05D005381 ORTHO05D006674 3.2e-141 506.1 548 56.0
AT2G28450 Arabidopsis thaliana HOM05D005381 ORTHO05D006674 2.1e-140 503.4 612 50.2
Carub.0004s0939 Capsella rubella HOM05D005381 ORTHO05D006674 2.1e-140 503.4 606 49.7
Aa31LG5G7770 Aethionema arabicum HOM05D005381 ORTHO05D006674 1.0e-139 501.1 592 50.5
THA.LOC104800610 Tarenaya hassleriana HOM05D005381 ORTHO05D006674 5.2e-136 488.8 559 51.3
C03p60310 Brassica napus HOM05D005381 ORTHO05D006674 1.5e-127 460.7 308 80.8
Haze_23841 Corylus avellana HOM05D005381 ORTHO05D006674 1.1e-120 438.0 569 48.3
DCAR_018815 Daucus carota HOM05D005381 ORTHO05D006674 3.4e-119 433.0 562 46.1
Gohir.A03G034400 Gossypium hirsutum HOM05D005381 ORTHO05D006674 4.5e-119 432.6 561 46.9
QL01p022359 Quercus lobata HOM05D005381 ORTHO05D006674 4.5e-119 432.6 568 46.7
Gohir.D03G133900 Gossypium hirsutum HOM05D005381 ORTHO05D006674 5.8e-119 432.2 562 47.0
Gorai.003G141000 Gossypium raimondii HOM05D005381 ORTHO05D006674 5.8e-119 432.2 562 47.0
Lsat_1_v5_gn_6_46081 Lactuca sativa HOM05D005381 ORTHO05D006674 1.4e-117 427.6 540 46.5
Duzib168G0972 Durio zibethinus HOM05D005381 ORTHO05D006674 1.9e-117 427.2 565 46.5
Dinv32755 Davidia involucrata HOM05D005381 ORTHO05D006674 1.2e-116 424.5 571 45.2
FAN21G0488 Fragaria x ananassa HOM05D005381 ORTHO05D006674 1.2e-116 424.5 562 46.1
Hma1.2p1_1031F.1_g249980 Hydrangea macrophylla HOM05D005381 ORTHO05D006674 1.2e-116 424.5 510 50.4
RcHm_v2.0_Chr5g0059591 Rosa chinensis HOM05D005381 ORTHO05D006674 2.7e-116 423.3 567 46.0
ECA233G6150 Erigeron canadensis HOM05D005381 ORTHO05D006674 4.6e-116 422.5 546 47.3
GSVIVG01025178001 Vitis vinifera HOM05D005381 ORTHO05D006674 6.0e-116 422.2 551 47.4
Ca_05253_v3 Cicer arietinum L. HOM05D005381 ORTHO05D006674 3.0e-115 419.9 552 46.4
Nitab4.5_0003701g0010 Nicotiana tabacum HOM05D005381 ORTHO05D006674 3.0e-115 419.9 589 44.7
TAR636G1890 Trochodendron aralioides HOM05D005381 ORTHO05D006674 3.9e-115 419.5 516 48.4
SalBow3G2811 Salvia bowleyana HOM05D005381 ORTHO05D006674 5.1e-115 419.1 613 44.4
Manes.04G021900 Manihot esculenta HOM05D005381 ORTHO05D006674 6.7e-115 418.7 571 45.7
Prupe.6G100600 Prunus persica HOM05D005381 ORTHO05D006674 6.7e-115 418.7 566 45.6
arahy.Tifrunner.gnm1.ann1.I533MD Arachis hypogaea HOM05D005381 ORTHO05D006674 8.7e-115 418.3 565 47.1
FvH4_3g32530 Fragaria vesca HOM05D005381 ORTHO05D006674 1.5e-114 417.5 566 45.1
FAN11G2629 Fragaria x ananassa HOM05D005381 ORTHO05D006674 1.5e-114 417.5 566 45.1
Nn2g10776 Nelumbo nucifera HOM05D005381 ORTHO05D006674 1.5e-114 417.5 568 45.8
Ciclev10027798m.g Citrus clementina HOM05D005381 ORTHO05D006674 4.3e-114 416.0 572 46.0
Rhsim13G0093900 Rhododendron simsii HOM05D005381 ORTHO05D006674 4.3e-114 416.0 562 46.1
Psat7g224200 Pisum sativum HOM05D005381 ORTHO05D006674 5.6e-114 415.6 551 46.3
Eucgr.J00934 Eucalyptus grandis HOM05D005381 ORTHO05D006674 1.3e-113 414.5 571 45.2
MD11G1134700 Malus domestica HOM05D005381 ORTHO05D006674 2.8e-113 413.3 563 44.8
Medtr4g059550 Medicago truncatula HOM05D005381 ORTHO05D006674 4.8e-113 412.5 548 46.9
TAR636G1844 Trochodendron aralioides HOM05D005381 ORTHO05D006674 6.2e-113 412.1 510 48.0
CiPaw.14G080100 Carya illinoinensis HOM05D005381 ORTHO05D006674 1.1e-112 411.4 602 43.7
Thecc.09G339700 Theobroma cacao HOM05D005381 ORTHO05D006674 1.1e-112 411.4 565 45.8
AUR62039627 Chenopodium quinoa HOM05D005381 ORTHO05D006674 1.4e-112 411.0 582 45.7
HanXRQChr13g0403491 Helianthus annuus HOM05D005381 ORTHO05D006674 3.1e-112 409.8 518 46.7
Aqoxy5G04136 Aquilegia oxysepala HOM05D005381 ORTHO05D006674 9.0e-112 408.3 568 44.7
AUR62024992 Chenopodium quinoa HOM05D005381 ORTHO05D006674 9.0e-112 408.3 582 45.5
Aqoxy1G01625 Aquilegia oxysepala HOM05D005381 ORTHO05D006674 1.2e-111 407.9 568 44.5
CSS0041314 Camellia sinensis var. sinensis HOM05D005381 ORTHO05D006674 1.2e-111 407.9 567 44.1
arahy.Tifrunner.gnm1.ann1.7B6ACI Arachis hypogaea HOM05D005381 ORTHO05D006674 2.0e-111 407.1 588 45.1
CANSAT54G1801 Cannabis sativa HOM05D005381 ORTHO05D006674 3.4e-111 406.4 619 42.6
Lj2A1029T35 Lonicera japonica HOM05D005381 ORTHO05D006674 3.4e-111 406.4 584 44.0
Lalb_Chr01g0004271 Lupinus albus HOM05D005381 ORTHO05D006674 3.4e-111 406.4 586 44.7
CSS0008106 Camellia sinensis var. sinensis HOM05D005381 ORTHO05D006674 4.5e-111 406.0 567 44.6
MD03G1116700 Malus domestica HOM05D005381 ORTHO05D006674 5.8e-111 405.6 565 43.7
Peaxi162Scf00270g00915 Petunia axillaris HOM05D005381 ORTHO05D006674 5.8e-111 405.6 600 43.0
C03p60360 Brassica napus HOM05D005381 ORTHO05D006674 1.3e-110 404.4 273 80.2
BolC3t18299H Brassica oleracea HOM05D005381 ORTHO05D006674 1.3e-110 404.4 273 80.2
CsaV3_6G013880 Cucumis sativus L. HOM05D005381 ORTHO05D006674 1.9e-109 400.6 602 42.4
Potri.009G013000 Populus trichocarpa HOM05D005381 ORTHO05D006674 9.3e-109 398.3 618 42.7
PSO063G6738 Papaver somniferum HOM05D005381 ORTHO05D006674 1.6e-108 397.5 576 43.2
Glyma.12G068100 Glycine max HOM05D005381 ORTHO05D006674 3.5e-108 396.4 674 40.5
Cpa.g.sc898.4 Carica papaya HOM05D005381 ORTHO05D006674 3.9e-107 392.9 562 43.4
PSO339G1100 Papaver somniferum HOM05D005381 ORTHO05D006674 8.7e-107 391.7 575 42.4
Sed0021600 Sechium edule HOM05D005381 ORTHO05D006674 3.3e-106 389.8 595 42.2
VMungo1127G2043 Vigna mungo HOM05D005381 ORTHO05D006674 4.3e-106 389.4 675 39.7
PGR119G0002 Punica granatum HOM05D005381 ORTHO05D006674 5.6e-106 389.0 537 44.5
ClCG02G021120 Citrullus lanatus HOM05D005381 ORTHO05D006674 7.4e-106 388.7 602 42.7
COL.COLO4_18342 Corchorus olitorius HOM05D005381 ORTHO05D006674 2.1e-105 387.1 634 42.1
Lj3g0020359 Lotus japonicus HOM05D005381 ORTHO05D006674 3.7e-105 386.3 613 41.9
Sopen11g028060 Solanum pennellii HOM05D005381 ORTHO05D006674 3.7e-105 386.3 605 42.1
Solyc11g069340.2 Solanum lycopersicum HOM05D005381 ORTHO05D006674 4.8e-105 386.0 605 41.7
Glyma.11G147200 Glycine max HOM05D005381 ORTHO05D006674 1.1e-104 384.8 671 39.6
CAN.G631.20 Capsicum annuum HOM05D005381 ORTHO05D006674 1.8e-104 384.0 597 41.0
TPR.G15543 Trifolium pratense HOM05D005381 ORTHO05D006674 4.0e-104 382.9 633 40.8
MELO3C025769.2 Cucumis melo HOM05D005381 ORTHO05D006674 9.0e-104 381.7 626 40.6
FAN25G3738 Fragaria x ananassa HOM05D005381 ORTHO05D006674 9.0e-104 381.7 561 43.1
Phvul.011G078600 Phaseolus vulgaris HOM05D005381 ORTHO05D006674 9.0e-104 381.7 627 40.8
SGA_v2.0_scaffold97G29223 Striga asiatica HOM05D005381 ORTHO05D006674 1.2e-103 381.3 574 43.9
FAN16G3073 Fragaria x ananassa HOM05D005381 ORTHO05D006674 4.5e-103 379.4 405 53.1
MBI10_g13354_MAGBIO Magnolia biondii HOM05D005381 ORTHO05D006674 4.2e-101 372.9 629 39.6
ATR0115G037 Amborella trichopoda HOM05D005381 ORTHO05D006674 1.6e-100 370.9 612 40.7
Sabra09G0008300 Salix brachista HOM05D005381 ORTHO05D006674 2.1e-100 370.5 630 40.3
HPP92_012655 Vanilla planifolia HOM05D005381 ORTHO05D006674 2.3e-99 367.1 626 38.2
Hma1.2p1_1031F.1_g249990 Hydrangea macrophylla HOM05D005381 ORTHO05D006674 5.1e-99 365.9 359 56.0
vmacro03193 Vaccinium macrocarpon HOM05D005381 ORTHO05D006674 7.4e-98 362.1 598 40.5
Zm00001eb089580 Zea mays HOM05D005381 ORTHO05D006674 7.4e-98 362.1 620 38.5
unitig_899.g14913 Utricularia gibba HOM05D005381 ORTHO05D006674 1.4e-96 357.8 542 44.1
Sc06g0010080 Simmondsia chinensis HOM05D005381 ORTHO05D006674 1.8e-96 357.5 355 54.9
Lalb_Chr19g0137331 Lupinus albus HOM05D005381 ORTHO05D006674 3.1e-96 356.7 357 55.2
Cc01_g11210 Coffea canephora HOM05D005381 ORTHO05D006674 5.3e-96 355.9 360 54.2
TWI79G1139 Tripterygium wilfordii HOM05D005381 ORTHO05D006674 1.0e-94 351.7 355 54.1
SEGI_24136 Sequoiadendron giganteum HOM05D005381 ORTHO05D006674 1.3e-94 351.3 572 39.9
Nitab4.5_0000650g0150 Nicotiana tabacum HOM05D005381 ORTHO05D006674 1.9e-93 347.4 584 40.4
EL10Ac9g22502 Beta vulgaris HOM05D005381 ORTHO05D006674 1.0e-91 341.7 565 41.2
Zm00001eb418880 Zea mays HOM05D005381 ORTHO05D006674 1.4e-91 341.3 358 51.4
Migut.D02217 Erythranthe guttata HOM05D005381 ORTHO05D006674 1.8e-91 340.9 554 42.4
Mapoly0078s0012 Marchantia polymorpha HOM05D005381 ORTHO05D006674 5.1e-91 339.3 512 40.2
CDE08G1578 Ceratophyllum demersum HOM05D005381 ORTHO05D006674 1.1e-90 338.2 497 43.9
Atru.chr3.3639 Acer truncatum HOM05D005381 ORTHO05D006674 9.7e-90 335.1 284 62.3
Pp3c10_16370 Physcomitrium patens HOM05D005381 ORTHO05D006674 7.7e-87 325.5 536 37.9
SMO340G0204 Selaginella moellendorffii HOM05D005381 ORTHO05D006674 1.1e-80 305.1 524 38.2
AagrBONN_evm.TU.Sc2ySwM_228.3233 Anthoceros agrestis HOM05D005381 ORTHO05D006674 7.0e-80 302.4 588 34.9
Oeu002862.1 Olea europaea HOM05D005381 ORTHO05D006674 5.2e-67 259.6 227 55.5
Os04g0105000 Oryza sativa ssp. japonica HOM05D005381 ORTHO05D006674 1.4e-64 251.5 221 55.7
Actinidia07132 Actinidia chinensis HOM05D005381 ORTHO05D006674 2.7e-63 247.3 313 49.8
SMO184G0011 Selaginella moellendorffii HOM05D005381 ORTHO05D006674 7.2e-53 212.6 329 38.6
CDE02G3164 Ceratophyllum demersum HOM05D005381 ORTHO05D006674 3.4e-50 203.8 422 37.2
Ah.01g002830 Amaranthus hybridus HOM05D005381 ORTHO05D006674 7.5e-50 202.6 198 52.5
Hund08141 Selenicereus undatus HOM05D005381 ORTHO05D006674 7.3e-37 159.5 351 37.0
CBR_g8736 Chara braunii HOM05D005381 ORTHO05D006674 4.7e-36 156.8 235 40.0
Oeu002863.1 Olea europaea HOM05D005381 ORTHO05D006674 5.8e-34 149.8 385 32.7
C03p60350 Brassica napus HOM05D005381 ORTHO05D006674 1.2e-31 142.1 143 62.2
Cre02.g101950 Chlamydomonas reinhardtii HOM05D005381 ORTHO05D006674 1.6e-23 115.2 540 25.6
Rhsim13G0156400 Rhododendron simsii HOM05D005381 ORTHO05D006674 8.1e-20 102.8 105 52.4
Ah.01g002840 Amaranthus hybridus HOM05D005381 ORTHO05D006674 1.5e-18 98.6 282 31.6
CBR_g8738 Chara braunii HOM05D001539 ORTHO05D000937 2.1e-15 88.2 93 43.0
Atru.chr3.3638 Acer truncatum HOM05D005381 ORTHO05D006674 4.6e-15 87.0 98 52.0
Cc01_g11200 Coffea canephora HOM05D005381 ORTHO05D006674 4.6e-15 87.0 99 52.5
Duzib170G0010 Durio zibethinus HOM05D005381 ORTHO05D006674 1.1e-11 75.9 81 54.3
Actinidia07131 Actinidia chinensis HOM05D005381 ORTHO05D006674 2.6e-10 71.2 71 52.1
PRCOL_00006587 Prasinoderma coloniale HOM05D005216 ORTHO05D006453 8.7e-06 56.2 223 25.6


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