Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g32918 Brassica carinata HOM05D004593 ORTHO05D003703 8.2e-61 236.9 120 100.0
Sp1g28540 Schrenkiella parvula HOM05D004593 ORTHO05D003703 8.0e-32 140.6 81 86.4
A09p33820 Brassica napus HOM05D004593 ORTHO05D003703 7.4e-30 134.0 81 85.2
BcaB08g36222 Brassica carinata HOM05D004593 ORTHO05D003703 1.2e-27 126.7 87 72.4
A10p17000 Brassica napus HOM05D004593 ORTHO05D003703 2.6e-27 125.6 87 72.4
CARHR273860 Cardamine hirsuta HOM05D004593 ORTHO05D003703 4.5e-27 124.8 87 72.4
CARHR273750 Cardamine hirsuta HOM05D004593 ORTHO05D003703 5.9e-27 124.4 87 71.3
C09p52250 Brassica napus HOM05D004593 ORTHO05D003703 1.0e-26 123.6 87 71.3
Thhalv10011949m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 1.0e-26 123.6 87 72.4
Thhalv10015510m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 1.3e-26 123.2 87 71.3
Sp6g21810 Schrenkiella parvula HOM05D004593 ORTHO05D003703 1.3e-26 123.2 87 69.0
AL71U10060 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 1.7e-26 122.9 87 70.1
AL8G36700 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 1.7e-26 122.9 87 70.1
BolC9t58127H Brassica oleracea HOM05D004593 ORTHO05D003703 2.9e-26 122.1 87 71.3
BcaB05g22575 Brassica carinata HOM05D004593 ORTHO05D003703 3.8e-26 121.7 87 70.1
BcaNung07341 Brassica carinata HOM05D004593 ORTHO05D003703 3.8e-26 121.7 87 71.3
C09p52610 Brassica napus HOM05D004593 ORTHO05D003703 3.8e-26 121.7 87 71.3
BolC3t13767H Brassica oleracea HOM05D004593 ORTHO05D003703 6.5e-26 120.9 81 75.3
Thhalv10015334m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 6.5e-26 120.9 87 69.0
Thhalv10015341m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 8.5e-26 120.6 87 69.0
BcaC03g13997 Brassica carinata HOM05D004593 ORTHO05D003703 1.9e-25 119.4 81 72.8
BcaC04g19662 Brassica carinata HOM05D004593 ORTHO05D003703 1.9e-25 119.4 94 66.0
C02p12360 Brassica napus HOM05D004593 ORTHO05D003703 1.9e-25 119.4 81 72.8
C03p13050 Brassica napus HOM05D004593 ORTHO05D003703 1.9e-25 119.4 87 71.3
C09p52660 Brassica napus HOM05D004593 ORTHO05D003703 1.9e-25 119.4 94 66.0
BolC2t07336H Brassica oleracea HOM05D004593 ORTHO05D003703 1.9e-25 119.4 81 72.8
BolC3t13768H Brassica oleracea HOM05D004593 ORTHO05D003703 1.9e-25 119.4 87 71.3
BolC9t58133H Brassica oleracea HOM05D004593 ORTHO05D003703 1.9e-25 119.4 94 66.0
CARHR157270 Cardamine hirsuta HOM05D004593 ORTHO05D003703 1.9e-25 119.4 81 69.1
BcaC04g19627 Brassica carinata HOM05D004593 ORTHO05D003703 2.5e-25 119.0 87 69.0
A10p17250 Brassica napus HOM05D004593 ORTHO05D003703 2.5e-25 119.0 87 70.1
BraA10t43809Z Brassica rapa HOM05D004593 ORTHO05D003703 2.5e-25 119.0 87 70.1
AL8G36790 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 3.2e-25 118.6 87 67.8
BraA10t43816Z Brassica rapa HOM05D004593 ORTHO05D003703 7.2e-25 117.5 87 70.1
AT5G60110 Arabidopsis thaliana HOM05D004593 ORTHO05D003703 9.4e-25 117.1 87 69.0
AT5G60180 Arabidopsis thaliana HOM05D004593 ORTHO05D003703 9.4e-25 117.1 87 69.0
BcaC04g19796 Brassica carinata HOM05D004593 ORTHO05D003703 9.4e-25 117.1 88 68.2
C09p51570 Brassica napus HOM05D004593 ORTHO05D003703 9.4e-25 117.1 88 68.2
BolC9t58016H Brassica oleracea HOM05D004593 ORTHO05D003703 9.4e-25 117.1 88 68.2
CARHR285940 Cardamine hirsuta HOM05D004593 ORTHO05D003703 9.4e-25 117.1 87 71.3
A02p07020 Brassica napus HOM05D004593 ORTHO05D003703 1.2e-24 116.7 81 71.6
A03p11320 Brassica napus HOM05D004593 ORTHO05D003703 1.2e-24 116.7 81 75.3
BraA02t05782Z Brassica rapa HOM05D004593 ORTHO05D003703 1.2e-24 116.7 81 71.6
BraA03t10445Z Brassica rapa HOM05D004593 ORTHO05D003703 1.2e-24 116.7 81 75.3
BcaB01g06359 Brassica carinata HOM05D004593 ORTHO05D003703 1.6e-24 116.3 81 72.8
CARHR183820 Cardamine hirsuta HOM05D004593 ORTHO05D003703 1.6e-24 116.3 87 69.0
Sp6g20950 Schrenkiella parvula HOM05D004593 ORTHO05D003703 2.1e-24 115.9 87 67.8
CARHR036840 Cardamine hirsuta HOM05D004593 ORTHO05D003703 2.7e-24 115.5 87 67.8
A10p17310 Brassica napus HOM05D004593 ORTHO05D003703 3.6e-24 115.2 87 67.8
BcaC04g19751 Brassica carinata HOM05D004593 ORTHO05D003703 4.7e-24 114.8 81 71.6
C09p51990 Brassica napus HOM05D004593 ORTHO05D003703 4.7e-24 114.8 81 71.6
BolC9t58061H Brassica oleracea HOM05D004593 ORTHO05D003703 4.7e-24 114.8 81 71.6
BcaB05g22526 Brassica carinata HOM05D004593 ORTHO05D003703 1.0e-23 113.6 81 72.8
Thhalv10015422m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 1.0e-23 113.6 87 64.4
Thhalv10016021m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 1.0e-23 113.6 87 64.4
A08p10760 Brassica napus HOM05D004593 ORTHO05D003703 3.0e-23 112.1 82 74.4
A10p16810 Brassica napus HOM05D004593 ORTHO05D003703 3.0e-23 112.1 81 71.6
BraA08t33073Z Brassica rapa HOM05D004593 ORTHO05D003703 3.0e-23 112.1 82 74.4
BcaB08g36269 Brassica carinata HOM05D004593 ORTHO05D003703 4.0e-23 111.7 87 66.7
A10p16490 Brassica napus HOM05D004593 ORTHO05D003703 4.0e-23 111.7 87 65.5
BraA10t43732Z Brassica rapa HOM05D004593 ORTHO05D003703 4.0e-23 111.7 87 65.5
BraA10t43760Z Brassica rapa HOM05D004593 ORTHO05D003703 4.0e-23 111.7 81 71.6
Carub.0008s2083 Capsella rubella HOM05D004593 ORTHO05D003703 4.0e-23 111.7 87 63.2
Sp6g21760 Schrenkiella parvula HOM05D004593 ORTHO05D003703 8.8e-23 110.5 77 68.8
Thhalv10014036m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 2.6e-22 109.0 80 70.0
BcaB08g36242 Brassica carinata HOM05D004593 ORTHO05D003703 4.4e-22 108.2 81 70.4
Carub.0008s2091 Capsella rubella HOM05D004593 ORTHO05D003703 2.2e-21 105.9 89 61.8
AT1G21620 Arabidopsis thaliana HOM05D004593 ORTHO05D003703 2.8e-21 105.5 87 60.9
AL8G35710 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 3.7e-21 105.1 88 64.8
AT5G59280 Arabidopsis thaliana HOM05D004593 ORTHO05D003703 9.1e-20 100.5 88 62.5
BcaC01g06509 Brassica carinata HOM05D004593 ORTHO05D003703 1.2e-19 100.1 81 63.0
BcaC01g06510 Brassica carinata HOM05D004593 ORTHO05D003703 1.2e-19 100.1 81 63.0
C03p13510 Brassica napus HOM05D004593 ORTHO05D003703 2.0e-19 99.4 81 63.0
BolC3t13806H Brassica oleracea HOM05D004593 ORTHO05D003703 2.0e-19 99.4 81 63.0
A10p16830 Brassica napus HOM05D004593 ORTHO05D003703 2.7e-19 99.0 81 63.0
BraA10t43761Z Brassica rapa HOM05D004593 ORTHO05D003703 3.5e-19 98.6 81 64.2
BraA03t10472Z Brassica rapa HOM05D004593 ORTHO05D003703 4.5e-19 98.2 81 58.0
Carub.0008s1994 Capsella rubella HOM05D004593 ORTHO05D003703 5.9e-19 97.8 83 61.4
A03p11590 Brassica napus HOM05D004593 ORTHO05D003703 7.7e-19 97.4 81 58.0
C03p13470 Brassica napus HOM05D004593 ORTHO05D003703 1.7e-18 96.3 81 60.5
BolC3t13804H Brassica oleracea HOM05D004593 ORTHO05D003703 1.7e-18 96.3 81 60.5
C03p13480 Brassica napus HOM05D004593 ORTHO05D003703 2.2e-18 95.9 81 56.8
C09p52000 Brassica napus HOM05D004593 ORTHO05D003703 3.8e-18 95.1 81 61.7
BolC9t58062H Brassica oleracea HOM05D004593 ORTHO05D003703 3.8e-18 95.1 81 61.7
BolC3t13805H Brassica oleracea HOM05D004593 ORTHO05D003703 5.0e-18 94.7 81 56.8
BraA03t10471Z Brassica rapa HOM05D004593 ORTHO05D003703 8.5e-18 94.0 81 59.3
A03p11580 Brassica napus HOM05D004593 ORTHO05D003703 1.1e-17 93.6 81 59.3
BcaC01g06511 Brassica carinata HOM05D004593 ORTHO05D003703 1.5e-17 93.2 96 56.2
BcaB08g36239 Brassica carinata HOM05D004593 ORTHO05D003703 1.9e-17 92.8 81 61.7
BcaB01g04563 Brassica carinata HOM05D004593 ORTHO05D003703 2.5e-17 92.4 81 55.6
Aa31LG1G11610 Aethionema arabicum HOM05D004593 ORTHO05D003703 3.2e-17 92.0 84 61.9
BcaB01g04566 Brassica carinata HOM05D004593 ORTHO05D003703 4.2e-17 91.7 81 56.8
BcaB08g36241 Brassica carinata HOM05D004593 ORTHO05D003703 9.4e-17 90.5 81 60.5
C03p13530 Brassica napus HOM05D004593 ORTHO05D003703 9.4e-17 90.5 96 54.2
BolC3t13808H Brassica oleracea HOM05D004593 ORTHO05D003703 9.4e-17 90.5 96 54.2
C02p12180 Brassica napus HOM05D004593 ORTHO05D003703 1.2e-16 90.1 57 78.9
C03p13460 Brassica napus HOM05D004593 ORTHO05D003703 4.7e-16 88.2 82 58.5
Sp6g21310 Schrenkiella parvula HOM05D004593 ORTHO05D003703 4.7e-16 88.2 81 58.0
A10p16850 Brassica napus HOM05D004593 ORTHO05D003703 1.0e-15 87.0 80 58.8
CARHR118680 Cardamine hirsuta HOM05D004593 ORTHO05D003703 1.0e-15 87.0 49 89.8
BraA10t43763Z Brassica rapa HOM05D004593 ORTHO05D003703 1.4e-15 86.7 80 57.5
A03p11600 Brassica napus HOM05D004593 ORTHO05D003703 1.8e-15 86.3 97 54.6
Carub.0008s2528 Capsella rubella HOM05D004593 ORTHO05D003703 1.8e-15 86.3 83 56.6
BraA03t10473Z Brassica rapa HOM05D004593 ORTHO05D003703 4.0e-15 85.1 97 54.6
Aa31LG2G18740 Aethionema arabicum HOM05D004593 ORTHO05D003703 1.5e-14 83.2 83 54.2
AT1G35850 Arabidopsis thaliana HOM05D004593 ORTHO05D003703 3.4e-14 82.0 88 52.3
BcaB08g36243 Brassica carinata HOM05D004593 ORTHO05D003703 4.4e-14 81.6 82 58.5
Aa31LG1G12760 Aethionema arabicum HOM05D004593 ORTHO05D003703 9.8e-14 80.5 88 52.3
THA.LOC104818525 Tarenaya hassleriana HOM05D004593 ORTHO05D003703 9.8e-14 80.5 85 47.1
THA.LOC104818526 Tarenaya hassleriana HOM05D004593 ORTHO05D003703 9.8e-14 80.5 85 47.1
THA.LOC104818528 Tarenaya hassleriana HOM05D004593 ORTHO05D003703 9.8e-14 80.5 85 47.1
BraA10t43762Z Brassica rapa HOM05D004593 ORTHO05D003703 4.8e-13 78.2 80 55.0
BolC3t13803H Brassica oleracea HOM05D004593 ORTHO05D003703 6.3e-13 77.8 81 53.1
AL8G41860 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 1.4e-12 76.6 83 51.8
C09p52010 Brassica napus HOM05D004593 ORTHO05D003703 1.4e-12 76.6 80 55.0
BolC9t58063H Brassica oleracea HOM05D004593 ORTHO05D003703 1.4e-12 76.6 80 55.0
BcaC04g19750 Brassica carinata HOM05D004593 ORTHO05D003703 3.1e-12 75.5 80 53.8
BcaB08g36237 Brassica carinata HOM05D004593 ORTHO05D003703 5.4e-12 74.7 79 54.4
BraA10t43765Z Brassica rapa HOM05D004593 ORTHO05D003703 7.0e-12 74.3 78 52.6
THA.LOC104818524 Tarenaya hassleriana HOM05D004593 ORTHO05D003703 1.6e-11 73.2 85 47.1
A02p41070 Brassica napus HOM05D004593 ORTHO05D003703 2.0e-11 72.8 80 53.8
A03p54980 Brassica napus HOM05D004593 ORTHO05D003703 2.0e-11 72.8 80 53.8
THA.LOC104818529 Tarenaya hassleriana HOM05D004593 ORTHO05D003703 1.7e-10 69.7 72 51.4
A10p16860 Brassica napus HOM05D004593 ORTHO05D003703 2.9e-10 68.9 78 51.3
C05p00590 Brassica napus HOM05D004593 ORTHO05D017396 6.6e-10 67.8 85 43.5
BolC5t28848H Brassica oleracea HOM05D004593 ORTHO05D017396 6.6e-10 67.8 85 43.5
BcaB03g13579 Brassica carinata HOM05D004593 ORTHO05D003703 1.1e-09 67.0 85 43.5
BcaC01g06512 Brassica carinata HOM05D004593 ORTHO05D003703 1.9e-09 66.2 55 61.8
BcaB08g36236 Brassica carinata HOM05D004593 ORTHO05D003703 4.0e-07 58.5 76 48.7
C03p15920 Brassica napus HOM05D004593 ORTHO05D003703 5.2e-07 58.2 46 63.0
BolC3t14022H Brassica oleracea HOM05D004593 ORTHO05D003703 5.2e-07 58.2 46 63.0
AT1G01410 Arabidopsis thaliana HOM05D004593 ORTHO05D017396 8.9e-07 57.4 91 35.2
QL05p068663 Quercus lobata HOM05D000867 ORTHO05D003703 1.2e-06 57.0 89 39.3
BraA03t10446Z Brassica rapa HOM05D004593 ORTHO05D003703 1.5e-06 56.6 36 72.2
Manes.14G015800 Manihot esculenta HOM05D000867 ORTHO05D003703 1.5e-06 56.6 108 32.4
AL1G11040 Arabidopsis lyrata HOM05D004593 ORTHO05D017396 2.0e-06 56.2 82 37.8
QL05p069029 Quercus lobata HOM05D000867 ORTHO05D003703 2.6e-06 55.8 89 39.3
Ciclev10023507m.g Citrus clementina HOM05D000867 ORTHO05D003703 4.4e-06 55.1 88 33.0
CARHR278440 Cardamine hirsuta HOM05D004593 ORTHO05D017396 7.5e-06 54.3 83 36.1
Haze_06967 Corylus avellana HOM05D000867 ORTHO05D003703 9.8e-06 53.9 89 39.3
Prupe.4G007700 Prunus persica HOM05D000867 ORTHO05D003703 9.8e-06 53.9 81 38.3


User provided reference genes

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