Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g19957 Brassica carinata HOM05D004569 ORTHO05D005333 3.5e-74 281.6 146 100.0
C09p08990 Brassica napus HOM05D004569 ORTHO05D005333 7.1e-59 230.7 143 86.0
BolC9t53811H Brassica oleracea HOM05D004569 ORTHO05D005333 7.1e-59 230.7 143 86.0
BraA09t36445Z Brassica rapa HOM05D004569 ORTHO05D005333 7.1e-59 230.7 148 85.8
BcaC04g23378 Brassica carinata HOM05D004569 ORTHO05D005333 2.7e-58 228.8 141 87.2
A09p07940 Brassica napus HOM05D004569 ORTHO05D005333 6.0e-58 227.6 149 84.6
Sp2g26090 Schrenkiella parvula HOM05D004569 ORTHO05D005333 6.7e-49 197.6 146 73.3
BcaC03g18183 Brassica carinata HOM05D004569 ORTHO05D005333 8.7e-49 197.2 148 77.7
A02p42590 Brassica napus HOM05D004569 ORTHO05D005333 1.6e-47 193.0 146 76.0
C02p62490 Brassica napus HOM05D004569 ORTHO05D005333 3.7e-47 191.8 148 76.4
BolC2t12308H Brassica oleracea HOM05D004569 ORTHO05D005333 3.7e-47 191.8 148 76.4
BcaB07g29675 Brassica carinata HOM05D004569 ORTHO05D005333 1.8e-46 189.5 151 72.8
BraA02t09187Z Brassica rapa HOM05D004569 ORTHO05D005333 9.0e-46 187.2 141 76.6
AL8G39970 Arabidopsis lyrata HOM05D004569 ORTHO05D005333 2.5e-43 179.1 140 69.3
Thhalv10005100m.g Eutrema salsugineum HOM05D004569 ORTHO05D005333 2.5e-43 179.1 143 69.9
AT5G62950 Arabidopsis thaliana HOM05D004569 ORTHO05D005333 7.1e-43 177.6 142 69.0
CARHR276760 Cardamine hirsuta HOM05D004569 ORTHO05D005333 9.3e-43 177.2 140 67.9
Carub.0008s2366 Capsella rubella HOM05D004569 ORTHO05D005333 1.6e-42 176.4 145 67.6
Carub.0004s0755 Capsella rubella HOM05D004569 ORTHO05D005333 2.7e-42 175.6 147 68.7
AL3G51140 Arabidopsis lyrata HOM05D004569 ORTHO05D005333 3.5e-42 175.3 142 68.3
BolC6t39293H Brassica oleracea HOM05D004569 ORTHO05D005333 7.9e-42 174.1 145 69.0
BcaC08g46303 Brassica carinata HOM05D004569 ORTHO05D005333 1.0e-41 173.7 144 69.4
Thhalv10000370m.g Eutrema salsugineum HOM05D004569 ORTHO05D005333 2.3e-41 172.6 143 65.7
C06p41320 Brassica napus HOM05D004569 ORTHO05D005333 3.0e-41 172.2 142 69.7
BcaC01g02544 Brassica carinata HOM05D004569 ORTHO05D005333 5.1e-41 171.4 143 68.5
C03p63650 Brassica napus HOM05D004569 ORTHO05D005333 5.1e-41 171.4 143 68.5
BolC3t18624H Brassica oleracea HOM05D004569 ORTHO05D005333 5.1e-41 171.4 143 68.5
Aa31LG11G680 Aethionema arabicum HOM05D004569 ORTHO05D005333 9.7e-40 167.2 141 66.0
BcaB02g09711 Brassica carinata HOM05D004569 ORTHO05D005333 8.5e-36 154.1 136 65.4
THA.LOC104827037 Tarenaya hassleriana HOM05D004569 ORTHO05D005333 9.4e-35 150.6 139 61.2
BraA06t25922Z Brassica rapa HOM05D004569 ORTHO05D005333 3.9e-33 145.2 126 67.5
Potri.005G067600 Populus trichocarpa HOM05D004569 ORTHO05D005333 3.1e-30 135.6 138 55.8
PSO210G1425 Papaver somniferum HOM05D004569 ORTHO05D005333 6.9e-30 134.4 131 55.7
Thecc.04G238000 Theobroma cacao HOM05D004569 ORTHO05D005333 6.9e-30 134.4 137 53.3
PSO832G4509 Papaver somniferum HOM05D004569 ORTHO05D005333 2.6e-29 132.5 131 55.0
Duzib052G0452 Durio zibethinus HOM05D004569 ORTHO05D005333 4.5e-29 131.7 137 52.6
Haze_03750 Corylus avellana HOM05D004569 ORTHO05D005333 5.9e-29 131.3 123 57.7
Cfa006984 Carpinus fangiana HOM05D004569 ORTHO05D005333 1.0e-28 130.6 123 57.7
Sc19g0003960 Simmondsia chinensis HOM05D004569 ORTHO05D005333 1.0e-28 130.6 143 53.8
Dinv07545 Davidia involucrata HOM05D004569 ORTHO05D005333 1.7e-28 129.8 141 51.1
Gohir.A02G034100 Gossypium hirsutum HOM05D004569 ORTHO05D005333 2.2e-28 129.4 156 50.6
Manes.02G208200 Manihot esculenta HOM05D004569 ORTHO05D005333 2.2e-28 129.4 128 58.6
CiPaw.01G195800 Carya illinoinensis HOM05D004569 ORTHO05D005333 3.8e-28 128.6 139 54.0
Gorai.005G045300 Gossypium raimondii HOM05D004569 ORTHO05D005333 5.0e-28 128.3 135 54.1
TAR365G0299 Trochodendron aralioides HOM05D004569 ORTHO05D005333 6.5e-28 127.9 137 51.1
Gohir.D02G040900 Gossypium hirsutum HOM05D004569 ORTHO05D005333 1.4e-27 126.7 137 53.3
GSVIVG01036653001 Vitis vinifera HOM05D004569 ORTHO05D005333 1.4e-27 126.7 119 57.1
Hund09493 Selenicereus undatus HOM05D004569 ORTHO05D005333 1.9e-27 126.3 141 52.5
Nitab4.5_0000321g0230 Nicotiana tabacum HOM05D004569 ORTHO05D005333 2.5e-27 125.9 146 54.1
Nitab4.5_0004412g0030 Nicotiana tabacum HOM05D004569 ORTHO05D005333 2.5e-27 125.9 143 53.1
Peaxi162Scf00192g01617 Petunia axillaris HOM05D004569 ORTHO05D005333 2.5e-27 125.9 143 54.5
CSS0021073 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 4.2e-27 125.2 140 52.1
Duzib052G0972 Durio zibethinus HOM05D004569 ORTHO05D005333 7.2e-27 124.4 140 51.4
Nn1g01867 Nelumbo nucifera HOM05D004569 ORTHO05D005333 9.4e-27 124.0 122 54.9
Aqoxy5G00407 Aquilegia oxysepala HOM05D004569 ORTHO05D005333 1.6e-26 123.2 132 50.0
CSS0011446 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 2.7e-26 122.5 143 48.3
CAN.G135.33 Capsicum annuum HOM05D004569 ORTHO05D005333 2.7e-26 122.5 120 57.5
HanXRQChr06g0173001 Helianthus annuus HOM05D004569 ORTHO05D005333 3.6e-26 122.1 137 50.4
Ciclev10006087m.g Citrus clementina HOM05D004569 ORTHO05D005333 6.1e-26 121.3 136 49.3
ClCG06G006470 Citrullus lanatus HOM05D004569 ORTHO05D005333 1.0e-25 120.6 142 52.1
Cc03_g04240 Coffea canephora HOM05D004569 ORTHO05D005333 1.0e-25 120.6 149 48.3
HanXRQChr05g0158611 Helianthus annuus HOM05D004569 ORTHO05D005333 1.8e-25 119.8 125 52.0
SalBow2G1663 Salvia bowleyana HOM05D004569 ORTHO05D005333 1.8e-25 119.8 142 50.7
SalBow8G0974 Salvia bowleyana HOM05D004569 ORTHO05D005333 3.0e-25 119.0 135 52.6
Ah.02g110960 Amaranthus hybridus HOM05D000936 ORTHO05D001411 5.1e-25 118.2 136 49.3
TWI63G1720 Tripterygium wilfordii HOM05D004569 ORTHO05D005333 5.1e-25 118.2 141 49.6
Atru.chr4.2374 Acer truncatum HOM05D004569 ORTHO05D005333 6.7e-25 117.9 138 50.0
Lj6g0017152 Lotus japonicus HOM05D004569 ORTHO05D005333 6.7e-25 117.9 136 52.9
CANSAT78G0168 Cannabis sativa HOM05D004569 ORTHO05D005333 8.8e-25 117.5 137 51.1
SGA_v2.0_scaffold45G17132 Striga asiatica HOM05D004044 ORTHO05D005333 8.8e-25 117.5 138 49.3
Sabra05G0055500 Salix brachista HOM05D004569 ORTHO05D005333 1.1e-24 117.1 90 66.7
AUR62028629 Chenopodium quinoa HOM05D004569 ORTHO05D005333 1.5e-24 116.7 137 48.9
Peaxi162Scf00904g00217 Petunia axillaris HOM05D004569 ORTHO05D005333 1.5e-24 116.7 124 55.6
Sed0021164 Sechium edule HOM05D004569 ORTHO05D005333 1.5e-24 116.7 141 51.1
ECA246G0155 Erigeron canadensis HOM05D004569 ORTHO05D005333 5.7e-24 114.8 122 50.0
arahy.Tifrunner.gnm1.ann1.NDW3GA Arachis hypogaea HOM05D004569 ORTHO05D005333 7.4e-24 114.4 146 51.4
CSS0049273 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 7.4e-24 114.4 144 47.2
Ca_17658_v3 Cicer arietinum L. HOM05D004569 ORTHO05D005333 7.4e-24 114.4 140 49.3
MD13G1198900 Malus domestica HOM05D004569 ORTHO05D005333 7.4e-24 114.4 130 46.2
CsaV3_2G013430 Cucumis sativus L. HOM05D004569 ORTHO05D005333 1.3e-23 113.6 147 49.0
arahy.Tifrunner.gnm1.ann1.SFA2KC Arachis hypogaea HOM05D004569 ORTHO05D005333 1.7e-23 113.2 146 51.4
Glyma.11G217000 Glycine max HOM05D004569 ORTHO05D005333 1.7e-23 113.2 141 51.1
Lalb_Chr06g0161741 Lupinus albus HOM05D004569 ORTHO05D005333 2.2e-23 112.8 140 50.7
SGA_v2.0_scaffold353G49718 Striga asiatica HOM05D004569 ORTHO05D005333 2.2e-23 112.8 140 48.6
Glyma.18G039600 Glycine max HOM05D004569 ORTHO05D005333 3.7e-23 112.1 141 49.6
Dinv40544 Davidia involucrata HOM05D004569 ORTHO05D005333 4.8e-23 111.7 88 63.6
Phvul.001G230900 Phaseolus vulgaris HOM05D004569 ORTHO05D005333 4.8e-23 111.7 141 49.6
Oeu058961.1 Olea europaea HOM05D004569 ORTHO05D005333 6.3e-23 111.3 141 47.5
Oeu042815.1 Olea europaea HOM05D004569 ORTHO05D005333 1.1e-22 110.5 137 46.0
TPR.G14863 Trifolium pratense HOM05D004569 ORTHO05D005333 1.8e-22 109.8 138 50.0
VMungo1383G1439 Vigna mungo HOM05D004569 ORTHO05D005333 2.4e-22 109.4 146 47.3
MELO3C014285.2 Cucumis melo HOM05D004569 ORTHO05D005333 9.1e-22 107.5 92 62.0
Rhsim01G0189100 Rhododendron simsii HOM05D004569 ORTHO05D005333 9.1e-22 107.5 142 47.9
vmacro17995 Vaccinium macrocarpon HOM05D004569 ORTHO05D005333 9.1e-22 107.5 143 43.4
Sopen11g003670 Solanum pennellii HOM05D004569 ORTHO05D005333 2.0e-21 106.3 159 44.7
Medtr7g034585 Medicago truncatula HOM05D004569 ORTHO05D005333 2.6e-21 105.9 155 44.5
SalBow1G3047 Salvia bowleyana HOM05D004569 ORTHO05D005333 2.6e-21 105.9 93 60.2
PGR031G3247 Punica granatum HOM05D004569 ORTHO05D005333 3.4e-21 105.5 136 47.8
Migut.B00535 Erythranthe guttata HOM05D004569 ORTHO05D005333 4.5e-21 105.1 135 48.1
PGR004G1818 Punica granatum HOM05D004569 ORTHO05D005333 5.9e-21 104.8 134 45.5
CDE05G0131 Ceratophyllum demersum HOM05D004569 ORTHO05D005333 7.7e-21 104.4 122 48.4
Psat3g163880 Pisum sativum HOM05D004569 ORTHO05D005333 7.7e-21 104.4 138 47.8
VMungo1383G2501 Vigna mungo HOM05D004569 ORTHO05D005333 7.7e-21 104.4 140 47.1
Hma1.2p1_0602F.1_g187570 Hydrangea macrophylla HOM05D004569 ORTHO05D005333 1.7e-20 103.2 90 57.8
unitig_748.g7305 Utricularia gibba HOM05D004569 ORTHO05D005333 5.0e-20 101.7 127 47.2
Prupe.1G020700 Prunus persica HOM05D004569 ORTHO05D005333 6.5e-20 101.3 128 50.0
Atru.chr4.2398 Acer truncatum HOM05D004569 ORTHO05D005333 8.5e-20 100.9 90 58.9
Lj5g0008299 Lotus japonicus HOM05D004569 ORTHO05D005333 1.1e-19 100.5 140 47.9
MBI18_g09782_MAGBIO Magnolia biondii HOM05D004569 ORTHO05D005333 1.1e-19 100.5 139 42.4
Lsat_1_v5_gn_1_12980 Lactuca sativa HOM05D004569 ORTHO05D005333 1.4e-19 100.1 134 41.8
Nitab4.5_0004743g0130 Nicotiana tabacum HOM05D004569 ORTHO05D005333 3.2e-19 99.0 143 48.3
Aqoxy2G03457 Aquilegia oxysepala HOM05D004569 ORTHO05D005333 7.2e-19 97.8 82 61.0
PGSC0003DMG400027326 Solanum tuberosum HOM05D004569 ORTHO05D005333 2.1e-18 96.3 162 40.7
Zm00001eb076250 Zea mays HOM05D004569 ORTHO05D005333 2.1e-18 96.3 150 42.0
Rhsim04G0197700 Rhododendron simsii HOM05D004569 ORTHO05D005333 3.6e-18 95.5 142 45.1
HPP92_022914 Vanilla planifolia HOM05D004569 ORTHO05D005333 8.0e-18 94.4 150 43.3
Zm00001eb076270 Zea mays HOM05D004569 ORTHO05D005333 8.0e-18 94.4 150 41.3
RcHm_v2.0_Chr4g0387641 Rosa chinensis HOM05D004569 ORTHO05D005333 1.0e-17 94.0 143 42.7
Dinv07599 Davidia involucrata HOM05D004569 ORTHO05D005333 1.4e-17 93.6 81 58.0
Medtr6g045613 Medicago truncatula HOM05D004569 ORTHO05D005333 1.4e-17 93.6 90 53.3
Pp3c21_14050 Physcomitrium patens HOM05D004569 ORTHO05D005333 1.4e-17 93.6 135 43.0
FvH4_5g27570 Fragaria vesca HOM05D004569 ORTHO05D005333 1.8e-17 93.2 137 42.3
RcHm_v2.0_Chr6g0280701 Rosa chinensis HOM05D004569 ORTHO05D005333 1.8e-17 93.2 140 40.7
Zm00001eb076290 Zea mays HOM05D004569 ORTHO05D005333 1.8e-17 93.2 134 42.5
Zm00001eb310390 Zea mays HOM05D004569 ORTHO05D005333 1.8e-17 93.2 134 42.5
FAN12G4296 Fragaria x ananassa HOM05D004569 ORTHO05D005333 2.3e-17 92.8 145 40.0
Lsat_1_v5_gn_6_95400 Lactuca sativa HOM05D004569 ORTHO05D005333 3.9e-17 92.0 96 47.9
FvH4_4g01070 Fragaria vesca HOM05D004569 ORTHO05D005333 1.1e-16 90.5 145 39.3
Psat3g162000 Pisum sativum HOM05D004569 ORTHO05D005333 1.5e-16 90.1 90 53.3
Os12g0488800 Oryza sativa ssp. japonica HOM05D004569 ORTHO05D005333 2.6e-16 89.4 85 55.3
FAN13G2556 Fragaria x ananassa HOM05D004569 ORTHO05D005333 3.3e-16 89.0 136 41.2
Mapoly0090s0037 Marchantia polymorpha HOM05D004569 ORTHO05D005333 7.4e-16 87.8 122 40.2
AT3G28956 Arabidopsis thaliana HOM05D004569 ORTHO05D005333 2.8e-15 85.9 65 69.2
Atru.chr5.182 Acer truncatum HOM05D004569 ORTHO05D005333 3.7e-15 85.5 111 45.0
Eucgr.H03416 Eucalyptus grandis HOM05D004569 ORTHO05D005333 8.2e-15 84.3 138 39.9
ATR0829G086 Amborella trichopoda HOM05D004569 ORTHO05D005333 2.4e-14 82.8 121 40.5
AagrBONN_evm.TU.Sc2ySwM_228.788 Anthoceros agrestis HOM05D004569 ORTHO05D005333 4.1e-14 82.0 140 39.3
AUR62033084 Chenopodium quinoa HOM05D004569 ORTHO05D005333 7.0e-14 81.3 95 47.4
COL.COLO4_21559 Corchorus olitorius HOM05D004569 ORTHO05D005333 1.0e-12 77.4 105 40.0
A06p29750 Brassica napus HOM05D004569 ORTHO05D005333 3.8e-12 75.5 141 40.4
Medtr6g045603 Medicago truncatula HOM05D004569 ORTHO05D005333 3.8e-12 75.5 155 36.8
CSS0028808 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 6.5e-12 74.7 68 54.4
TAR636G3114 Trochodendron aralioides HOM05D004569 ORTHO05D005333 9.4e-11 70.9 96 41.7
SMO343G0078 Selaginella moellendorffii HOM05D004569 ORTHO05D005333 2.7e-10 69.3 147 33.3
GSVIVG01008529001 Vitis vinifera HOM05D004569 ORTHO05D005333 2.0e-08 63.2 53 60.4
CBR_g19683 Chara braunii HOM05D004569 ORTHO05D005333 2.6e-08 62.8 90 41.1
SEGI_13490 Sequoiadendron giganteum HOM05D004569 ORTHO05D000001 2.6e-08 62.8 98 37.8
FAN18G3311 Fragaria x ananassa HOM05D004569 ORTHO05D005333 2.2e-07 59.7 135 32.6
Hma1.2p1_0549F.1_g176970 Hydrangea macrophylla HOM05D004569 ORTHO05D005333 2.2e-07 59.7 91 38.5
AUR62008054 Chenopodium quinoa HOM05D000001 ORTHO05D000501 7.0e-06 54.7 84 35.7
arahy.Tifrunner.gnm1.ann1.LSLG48 Arachis hypogaea HOM05D001291 ORTHO05D005333 9.1e-06 54.3 102 40.2
Phvul.001G219600 Phaseolus vulgaris HOM05D004569 ORTHO05D005333 9.1e-06 54.3 45 64.4


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