Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g19406 Brassica carinata HOM05D004093 ORTHO05D004981 7.7e-189 663.7 341 100.0
C09p10190 Brassica napus HOM05D004093 ORTHO05D004981 5.1e-116 421.8 210 99.5
A02p41650 Brassica napus HOM05D004093 ORTHO05D004981 2.5e-86 323.2 343 56.3
BraA03t15310Z Brassica rapa HOM05D004093 ORTHO05D004981 2.5e-86 323.2 343 56.3
C04p37220 Brassica napus HOM05D004093 ORTHO05D004981 2.5e-62 243.4 137 91.2
BraA01t00441Z Brassica rapa HOM05D004093 ORTHO05D004981 7.2e-62 241.9 144 87.5
BcaC09g52186 Brassica carinata HOM05D004093 ORTHO05D004981 2.0e-56 223.8 131 88.5
BcaNung04674 Brassica carinata HOM05D004093 ORTHO05D004981 2.0e-56 223.8 131 88.5
A01p04580 Brassica napus HOM05D004093 ORTHO05D004981 2.0e-56 223.8 131 88.5
C01p04970 Brassica napus HOM05D004093 ORTHO05D004981 2.0e-56 223.8 131 88.5
BolC1t00478H Brassica oleracea HOM05D004093 ORTHO05D004981 2.0e-56 223.8 131 88.5
A08p17440 Brassica napus HOM05D004093 ORTHO05D004981 5.9e-56 222.2 131 87.8
Sp7g31500 Schrenkiella parvula HOM05D004093 ORTHO05D004981 5.9e-56 222.2 131 87.8
CARHR241850 Cardamine hirsuta HOM05D004093 ORTHO05D004981 7.7e-56 221.9 131 87.8
BcaC01g00967 Brassica carinata HOM05D004093 ORTHO05D004981 1.7e-55 220.7 131 87.0
A08p17410 Brassica napus HOM05D004093 ORTHO05D004981 1.7e-55 220.7 131 87.0
C03p86430 Brassica napus HOM05D004093 ORTHO05D004981 1.7e-55 220.7 131 87.0
BolC3t20936H Brassica oleracea HOM05D004093 ORTHO05D004981 1.7e-55 220.7 131 87.0
AT4G33760 Arabidopsis thaliana HOM05D004093 ORTHO05D004981 3.8e-55 219.5 131 86.3
Thhalv10024609m.g Eutrema salsugineum HOM05D004093 ORTHO05D004981 3.8e-55 219.5 131 87.0
Carub.0007s0667 Capsella rubella HOM05D004093 ORTHO05D004981 5.0e-55 219.2 131 86.3
AL7G17710 Arabidopsis lyrata HOM05D004093 ORTHO05D004981 8.5e-55 218.4 131 85.5
Aa31sc178G40 Aethionema arabicum HOM05D004093 ORTHO05D004981 1.9e-54 217.2 131 84.7
BcaB03g11876 Brassica carinata HOM05D004093 ORTHO05D004981 5.5e-54 215.7 131 85.5
arahy.Tifrunner.gnm1.ann1.14EEYB Arachis hypogaea HOM05D004093 ORTHO05D004981 1.4e-52 211.1 131 81.7
Glyma.05G236700 Glycine max HOM05D004093 ORTHO05D004981 1.4e-52 211.1 131 81.7
VMungo0251G2341 Vigna mungo HOM05D004093 ORTHO05D004981 1.4e-52 211.1 131 81.7
GSVIVG01037036001 Vitis vinifera HOM05D004093 ORTHO05D004981 1.4e-52 211.1 139 77.7
CSS0001341 Camellia sinensis var. sinensis HOM05D004093 ORTHO05D004981 1.8e-52 210.7 139 77.7
Rhsim11G0149600 Rhododendron simsii HOM05D004093 ORTHO05D004981 1.8e-52 210.7 139 77.0
QL11p028820 Quercus lobata HOM05D004093 ORTHO05D004981 2.3e-52 210.3 131 81.7
Ah.05g177500 Amaranthus hybridus HOM05D004093 ORTHO05D004981 3.0e-52 209.9 131 80.9
Cfa004713 Carpinus fangiana HOM05D004093 ORTHO05D004981 3.0e-52 209.9 131 81.7
Potri.009G084300 Populus trichocarpa HOM05D004093 ORTHO05D004981 3.0e-52 209.9 131 81.7
vmacro01935 Vaccinium macrocarpon HOM05D004093 ORTHO05D004981 3.0e-52 209.9 139 77.0
AUR62013810 Chenopodium quinoa HOM05D004093 ORTHO05D004981 4.0e-52 209.5 168 66.7
Hma1.2p1_1758F.1_g301170 Hydrangea macrophylla HOM05D004093 ORTHO05D004981 4.0e-52 209.5 139 77.0
CANSAT25G3849 Cannabis sativa HOM05D004093 ORTHO05D004981 5.2e-52 209.1 131 81.7
CAN.G606.83 Capsicum annuum HOM05D004093 ORTHO05D004981 5.2e-52 209.1 131 80.9
HanXRQChr03g0069101 Helianthus annuus HOM05D004093 ORTHO05D004981 5.2e-52 209.1 131 80.9
Lalb_Chr16g0387791 Lupinus albus HOM05D004093 ORTHO05D004981 5.2e-52 209.1 131 80.9
Oeu037299.1 Olea europaea HOM05D004093 ORTHO05D004981 5.2e-52 209.1 131 82.4
CiPaw.05G021800 Carya illinoinensis HOM05D004093 ORTHO05D004981 6.8e-52 208.8 131 80.2
HanXRQChr16g0510261 Helianthus annuus HOM05D004093 ORTHO05D004981 6.8e-52 208.8 131 80.2
PGR119G0904 Punica granatum HOM05D004093 ORTHO05D004981 6.8e-52 208.8 131 80.2
THA.LOC104807205 Tarenaya hassleriana HOM05D004093 ORTHO05D004981 6.8e-52 208.8 131 82.4
TPR.G32673 Trifolium pratense HOM05D004093 ORTHO05D004981 6.8e-52 208.8 131 80.9
Cc02_g20210 Coffea canephora HOM05D004093 ORTHO05D004981 1.2e-51 208.0 131 82.4
Phvul.002G318600 Phaseolus vulgaris HOM05D004093 ORTHO05D004981 1.2e-51 208.0 131 80.9
SGA_v2.0_scaffold219G42544 Striga asiatica HOM05D004093 ORTHO05D004981 1.2e-51 208.0 131 80.9
Ca_17297_v3 Cicer arietinum L. HOM05D004093 ORTHO05D004981 1.5e-51 207.6 131 80.2
Sed0024148 Sechium edule HOM05D004093 ORTHO05D004981 1.5e-51 207.6 131 80.9
TAR159G0001 Trochodendron aralioides HOM05D004093 ORTHO05D004981 1.5e-51 207.6 131 80.2
CiPaw.06G163100 Carya illinoinensis HOM05D004093 ORTHO05D004981 2.0e-51 207.2 131 81.7
Manes.07G052300 Manihot esculenta HOM05D004093 ORTHO05D004981 2.0e-51 207.2 131 80.9
Prupe.8G151800 Prunus persica HOM05D004093 ORTHO05D004981 2.0e-51 207.2 131 80.2
Atru.chr5.2252 Acer truncatum HOM05D004093 ORTHO05D004981 2.6e-51 206.8 131 80.2
EL10Ac1g00697 Beta vulgaris HOM05D004093 ORTHO05D004981 2.6e-51 206.8 131 80.2
CsaV3_4G000020 Cucumis sativus L. HOM05D004093 ORTHO05D004981 2.6e-51 206.8 131 80.9
MD10G1112200 Malus domestica HOM05D004093 ORTHO05D004981 2.6e-51 206.8 131 80.2
Medtr4g120810 Medicago truncatula HOM05D004093 ORTHO05D004981 2.6e-51 206.8 131 80.2
Medtr8g104740 Medicago truncatula HOM05D004093 ORTHO05D004981 2.6e-51 206.8 131 80.2
RcHm_v2.0_Chr6g0247831 Rosa chinensis HOM05D004093 ORTHO05D004981 2.6e-51 206.8 131 80.2
MSTRG.27768 Avicennia marina HOM05D004093 ORTHO05D004981 3.4e-51 206.5 131 81.7
Dinv16064 Davidia involucrata HOM05D004093 ORTHO05D004981 3.4e-51 206.5 139 76.3
Migut.N01121 Erythranthe guttata HOM05D004093 ORTHO05D004981 3.4e-51 206.5 131 80.2
Lsat_1_v5_gn_9_113901 Lactuca sativa HOM05D004093 ORTHO05D004981 3.4e-51 206.5 131 80.2
Sabra09G0065000 Salix brachista HOM05D004093 ORTHO05D004981 3.4e-51 206.5 144 75.0
ClCG10G009970 Citrullus lanatus HOM05D004093 ORTHO05D004981 4.4e-51 206.1 131 80.9
TWI14G0771 Tripterygium wilfordii HOM05D004093 ORTHO05D004981 4.4e-51 206.1 131 80.2
MELO3C018029.2 Cucumis melo HOM05D004093 ORTHO05D004981 5.7e-51 205.7 131 80.2
FvH4_2g03040 Fragaria vesca HOM05D004093 ORTHO05D004981 5.7e-51 205.7 131 79.4
Nitab4.5_0000772g0040 Nicotiana tabacum HOM05D004093 ORTHO05D004981 5.7e-51 205.7 131 79.4
Oeu018200.1 Olea europaea HOM05D004093 ORTHO05D004981 5.7e-51 205.7 131 80.9
Phvul.011G054700 Phaseolus vulgaris HOM05D004093 ORTHO05D004981 5.7e-51 205.7 131 78.6
Solyc01g106740.4 Solanum lycopersicum HOM05D004093 ORTHO05D004981 5.7e-51 205.7 131 79.4
Sopen01g049060 Solanum pennellii HOM05D004093 ORTHO05D004981 5.7e-51 205.7 131 79.4
PGSC0003DMG402005133 Solanum tuberosum HOM05D004093 ORTHO05D004981 5.7e-51 205.7 131 79.4
FAN15G0664 Fragaria x ananassa HOM05D004093 ORTHO05D004981 7.5e-51 205.3 134 76.9
Potri.001G289001 Populus trichocarpa HOM05D004093 ORTHO05D004981 7.5e-51 205.3 131 79.4
Dinv09528 Davidia involucrata HOM05D004093 ORTHO05D004981 9.8e-51 204.9 139 74.8
Haze_10324 Corylus avellana HOM05D004093 ORTHO05D004981 1.3e-50 204.5 127 82.7
PSO447G0184 Papaver somniferum HOM05D004093 ORTHO05D004981 1.3e-50 204.5 139 74.8
Sed0011100 Sechium edule HOM05D004093 ORTHO05D004981 1.3e-50 204.5 131 79.4
BcaC04g23281 Brassica carinata HOM05D004093 ORTHO05D004981 2.2e-50 203.8 114 92.1
ECA233G6085 Erigeron canadensis HOM05D004093 ORTHO05D004981 2.2e-50 203.8 131 79.4
Nitab4.5_0010657g0010 Nicotiana tabacum HOM05D004093 ORTHO05D004981 2.2e-50 203.8 131 78.6
AUR62023347 Chenopodium quinoa HOM05D004093 ORTHO05D004981 2.8e-50 203.4 137 77.4
DCAR_021934 Daucus carota HOM05D004093 ORTHO05D004981 2.8e-50 203.4 139 75.5
MBI16_g34665_MAGBIO Magnolia biondii HOM05D004093 ORTHO05D004981 2.8e-50 203.4 141 73.0
Thecc.02G031600 Theobroma cacao HOM05D004093 ORTHO05D004981 4.8e-50 202.6 143 74.8
unitig_62.g23638 Utricularia gibba HOM05D004093 ORTHO05D004981 4.8e-50 202.6 142 74.6
FAN24G1787 Fragaria x ananassa HOM05D004093 ORTHO05D004981 6.3e-50 202.2 128 79.7
FAN27G3135 Fragaria x ananassa HOM05D004093 ORTHO05D004981 6.3e-50 202.2 128 79.7
Actinidia04397 Actinidia chinensis HOM05D004093 ORTHO05D004981 8.3e-50 201.8 139 74.8
Duzib052G0943 Durio zibethinus HOM05D004093 ORTHO05D004981 8.3e-50 201.8 131 79.4
Sabra16G0180800 Salix brachista HOM05D004093 ORTHO05D004981 8.3e-50 201.8 131 77.9
Zm00001eb124020 Zea mays HOM05D004093 ORTHO05D004981 8.3e-50 201.8 150 69.3
Eucgr.I02505 Eucalyptus grandis HOM05D004093 ORTHO05D004981 1.1e-49 201.4 131 77.9
PSO210G2081 Papaver somniferum HOM05D004093 ORTHO05D004981 1.1e-49 201.4 128 79.7
Aqoxy2G01432 Aquilegia oxysepala HOM05D004093 ORTHO05D004981 2.4e-49 200.3 139 73.4
Lj4g0018571 Lotus japonicus HOM05D004093 ORTHO05D004981 2.4e-49 200.3 131 77.1
ECA240G1647 Erigeron canadensis HOM05D004093 ORTHO05D004981 4.1e-49 199.5 127 79.5
TWI59G0012 Tripterygium wilfordii HOM05D004093 ORTHO05D004981 4.1e-49 199.5 131 77.1
CDE04G3016 Ceratophyllum demersum HOM05D004093 ORTHO05D004981 7.0e-49 198.7 139 71.2
CDE07G1203 Ceratophyllum demersum HOM05D004093 ORTHO05D004981 7.0e-49 198.7 127 78.0
Gohir.A01G180900 Gossypium hirsutum HOM05D004093 ORTHO05D004981 7.0e-49 198.7 143 74.1
Aqoxy7G02734 Aquilegia oxysepala HOM05D004093 ORTHO05D004981 1.2e-48 198.0 139 72.7
C09p50660 Brassica napus HOM05D004093 ORTHO05D004981 1.6e-48 197.6 101 99.0
COL.COLO4_17799 Corchorus olitorius HOM05D004093 ORTHO05D004981 1.6e-48 197.6 143 72.0
Gohir.D01G172000 Gossypium hirsutum HOM05D004093 ORTHO05D004981 2.0e-48 197.2 143 73.4
Gorai.002G213600 Gossypium raimondii HOM05D004093 ORTHO05D004981 2.0e-48 197.2 143 73.4
Os01g0153400 Oryza sativa ssp. japonica HOM05D004093 ORTHO05D004981 2.0e-48 197.2 131 74.8
SEGI_06015 Sequoiadendron giganteum HOM05D004093 ORTHO05D004981 2.0e-48 197.2 131 74.8
SEGI_18816 Sequoiadendron giganteum HOM05D004093 ORTHO05D004981 2.0e-48 197.2 131 74.8
SEGI_31310 Sequoiadendron giganteum HOM05D004093 ORTHO05D004981 2.0e-48 197.2 131 74.8
ATR0767G039 Amborella trichopoda HOM05D004093 ORTHO05D004981 2.7e-48 196.8 139 70.5
Medtr1g113700 Medicago truncatula HOM05D004093 ORTHO05D004981 2.7e-48 196.8 138 74.6
SMO364G0944 Selaginella moellendorffii HOM05D004093 ORTHO05D004981 2.9e-47 193.4 131 74.8
Mapoly0029s0082 Marchantia polymorpha HOM05D004093 ORTHO05D004981 1.1e-46 191.4 139 68.3
Medtr4g052070 Medicago truncatula HOM05D004093 ORTHO05D004981 1.1e-46 191.4 133 73.7
HPP92_001209 Vanilla planifolia HOM05D004093 ORTHO05D004981 1.9e-46 190.7 141 68.1
Pp3c20_5000 Physcomitrium patens HOM05D004093 ORTHO05D004981 6.1e-45 185.7 138 69.6
AagrBONN_evm.TU.Sc2ySwM_117.2705 Anthoceros agrestis HOM05D004093 ORTHO05D004981 8.0e-45 185.3 131 70.2
AagrBONN_evm.TU.Sc2ySwM_117.2710 Anthoceros agrestis HOM05D004093 ORTHO05D004981 8.0e-45 185.3 131 70.2
Lj5C222T15 Lonicera japonica HOM05D004093 ORTHO05D004981 8.8e-44 181.8 139 68.3
CBR_g7978 Chara braunii HOM05D004093 ORTHO05D004981 1.2e-43 181.4 144 66.0
Peaxi162Scf00016g03248 Petunia axillaris HOM05D004093 ORTHO05D004981 5.7e-43 179.1 131 70.2
A04p16550 Brassica napus HOM05D001264 ORTHO05D017611 2.4e-41 173.7 167 60.5
MCO14G538 Micromonas commoda HOM05D004093 ORTHO05D004981 3.1e-41 173.3 133 66.2
Cre09.g390986 Chlamydomonas reinhardtii HOM05D004093 ORTHO05D004981 2.7e-40 170.2 132 64.4
Ca_17304_v3 Cicer arietinum L. HOM05D004093 ORTHO05D004981 3.0e-36 156.8 131 64.9
Hund17142 Selenicereus undatus HOM05D004093 ORTHO05D004981 8.9e-36 155.2 131 64.9
PRCOL_00006371 Prasinoderma coloniale HOM05D004093 ORTHO05D004981 3.4e-35 153.3 135 60.0
ECA233G4634 Erigeron canadensis HOM05D004093 ORTHO05D004981 3.7e-34 149.8 99 75.8
arahy.Tifrunner.gnm1.ann1.K8EMZF Arachis hypogaea HOM05D004093 ORTHO05D004981 1.2e-32 144.8 310 36.1
CSS0049011 Camellia sinensis var. sinensis HOM05D004093 ORTHO05D004981 5.9e-32 142.5 114 69.3
CSS0016143 Camellia sinensis var. sinensis HOM05D004093 ORTHO05D004981 7.3e-30 135.6 139 56.8
QL11p028781 Quercus lobata HOM05D004093 ORTHO05D004981 8.0e-29 132.1 96 71.9
Ciclev10028050m.g Citrus clementina HOM05D004093 ORTHO05D004981 2.5e-22 110.5 61 86.9
Glyma.08G043900 Glycine max HOM05D004093 ORTHO05D004981 1.6e-21 107.8 61 82.0
CSS0014733 Camellia sinensis var. sinensis HOM05D004093 ORTHO05D004981 1.4e-20 104.8 79 72.2
Glyma.16G091002 Glycine max HOM05D004093 ORTHO05D004981 1.2e-19 101.7 61 80.3
Cpa.g.c43557 Carica papaya HOM05D004093 ORTHO05D004981 2.0e-19 100.9 56 83.9
Sc20g0001830 Simmondsia chinensis HOM05D004093 ORTHO05D004981 3.4e-19 100.1 61 80.3
Psat7g009880 Pisum sativum HOM05D004093 ORTHO05D004981 4.4e-19 99.8 97 55.7
Nn6g32059 Nelumbo nucifera HOM05D004093 ORTHO05D004981 1.9e-17 94.4 66 65.2
PRCOL_00006453 Prasinoderma coloniale HOM05D004093 ORTHO05D004981 4.1e-17 93.2 143 44.1
BcaC07g38079 Brassica carinata HOM05D000124 ORTHO05D000056 1.2e-08 65.1 32 93.8
BolC8t48488H Brassica oleracea HOM05D000124 ORTHO05D000056 1.2e-08 65.1 32 93.8
vmacro20830 Vaccinium macrocarpon HOM05D004093 ORTHO05D004981 3.5e-08 63.5 45 66.7
A08p13170 Brassica napus HOM05D000124 ORTHO05D000056 6.0e-08 62.8 32 90.6
BraA08t33297Z Brassica rapa HOM05D000124 ORTHO05D000056 6.0e-08 62.8 32 90.6
BcaB04g18422 Brassica carinata HOM05D000124 ORTHO05D000056 3.9e-07 60.1 30 90.0
Thhalv10027543m.g Eutrema salsugineum HOM05D000124 ORTHO05D000056 1.1e-06 58.5 44 65.9


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