Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g19392 Brassica carinata HOM05D005235 ORTHO05D006938 3.5e-261 904.4 459 100.0
BcaC01g04429 Brassica carinata HOM05D005235 ORTHO05D006938 2.1e-229 798.9 498 84.9
BolC3t16290H Brassica oleracea HOM05D005235 ORTHO05D006938 2.1e-229 798.9 498 84.9
A03p33070 Brassica napus HOM05D005235 ORTHO05D006938 7.8e-229 797.0 501 84.2
BraA03t12477Z Brassica rapa HOM05D005235 ORTHO05D006938 3.0e-228 795.0 501 83.8
BolC1t05885H Brassica oleracea HOM05D005235 ORTHO05D006938 5.4e-222 774.2 507 80.9
BraA01t04625Z Brassica rapa HOM05D005235 ORTHO05D006938 5.4e-222 774.2 504 81.3
BNapus_Darmor_BZH_scaffold_99p00190 Brassica napus HOM05D005235 ORTHO05D006938 6.0e-221 770.8 504 81.0
BNapus_Darmor_BZH_scaffold_122p00160 Brassica napus HOM05D005235 ORTHO05D006938 7.8e-221 770.4 504 81.0
Sp3g01700 Schrenkiella parvula HOM05D005235 ORTHO05D006938 1.3e-218 763.1 513 79.5
AL3G12040 Arabidopsis lyrata HOM05D005235 ORTHO05D006938 2.6e-216 755.4 512 78.7
Thhalv10020578m.g Eutrema salsugineum HOM05D005235 ORTHO05D006938 9.9e-216 753.4 501 79.2
CARHR076660 Cardamine hirsuta HOM05D005235 ORTHO05D006938 4.9e-215 751.1 512 77.7
AT3G02660 Arabidopsis thaliana HOM05D005235 ORTHO05D006938 5.4e-214 747.7 512 77.9
Aa31LG5G13140 Aethionema arabicum HOM05D005235 ORTHO05D006938 1.5e-192 676.4 515 70.1
THA.LOC104820931 Tarenaya hassleriana HOM05D005235 ORTHO05D006938 3.4e-184 648.7 515 66.0
Gohir.D01G037300 Gossypium hirsutum HOM05D005235 ORTHO05D006938 2.9e-167 592.4 466 66.7
Gohir.A01G046600 Gossypium hirsutum HOM05D005235 ORTHO05D006938 5.0e-167 591.7 466 66.7
Gorai.002G045400 Gossypium raimondii HOM05D005235 ORTHO05D006938 7.2e-166 587.8 466 66.5
RcHm_v2.0_Chr7g0221241 Rosa chinensis HOM05D005235 ORTHO05D006938 2.3e-164 582.8 459 65.4
EL10Ac7g16931 Beta vulgaris HOM05D005235 ORTHO05D006938 2.0e-163 579.7 492 62.6
Duzib213G0463 Durio zibethinus HOM05D005235 ORTHO05D006938 2.0e-163 579.7 465 65.2
COL.COLO4_17457 Corchorus olitorius HOM05D005235 ORTHO05D000503 2.6e-163 579.3 439 67.4
FvH4_6g39550 Fragaria vesca HOM05D005235 ORTHO05D006938 9.7e-163 577.4 440 66.4
TAR626G0946 Trochodendron aralioides HOM05D005235 ORTHO05D006938 1.7e-162 576.6 510 60.4
MD08G1236200 Malus domestica HOM05D005235 ORTHO05D006938 2.8e-162 575.9 438 65.8
Manes.04G096400 Manihot esculenta HOM05D005235 ORTHO05D006938 8.2e-162 574.3 461 65.9
MD15G1428200 Malus domestica HOM05D005235 ORTHO05D006938 1.8e-161 573.2 438 65.1
Eucgr.I01565 Eucalyptus grandis HOM05D005235 ORTHO05D006938 2.4e-161 572.8 496 63.7
Rhsim08G0037300 Rhododendron simsii HOM05D005235 ORTHO05D006938 4.1e-161 572.0 430 66.7
Thecc.07G135900 Theobroma cacao HOM05D005235 ORTHO05D006938 4.1e-161 572.0 460 64.8
Prupe.1G572900 Prunus persica HOM05D005235 ORTHO05D006938 7.0e-161 571.2 437 65.7
CANSAT21G0039 Cannabis sativa HOM05D005235 ORTHO05D006938 1.2e-160 570.5 437 67.5
PGR142G4255 Punica granatum HOM05D005235 ORTHO05D006938 3.5e-160 568.9 482 63.9
Sabra14G0105800 Salix brachista HOM05D005235 ORTHO05D006938 3.5e-160 568.9 499 60.9
Ciclev10015023m.g Citrus clementina HOM05D005235 ORTHO05D006938 5.9e-160 568.2 481 63.8
Oeu061455.1 Olea europaea HOM05D005235 ORTHO05D006938 5.9e-160 568.2 443 66.1
FvH4_5g28930 Fragaria vesca HOM05D005235 ORTHO05D006938 1.0e-159 567.4 462 63.9
FAN13G2026 Fragaria x ananassa HOM05D005235 ORTHO05D006938 1.7e-159 566.6 458 64.0
Aqoxy1G00862 Aquilegia oxysepala HOM05D005235 ORTHO05D006938 2.9e-159 565.8 537 59.2
Cfa002235 Carpinus fangiana HOM05D005235 ORTHO05D006938 2.9e-159 565.8 483 62.1
Haze_25416 Corylus avellana HOM05D005235 ORTHO05D006938 5.0e-159 565.1 482 62.0
Nn6g33287 Nelumbo nucifera HOM05D005235 ORTHO05D006938 5.0e-159 565.1 524 59.4
vmacro22930 Vaccinium macrocarpon HOM05D005235 ORTHO05D006938 1.1e-158 563.9 428 66.4
Dinv25083 Davidia involucrata HOM05D005235 ORTHO05D006938 1.9e-158 563.1 449 65.0
Potri.014G140400 Populus trichocarpa HOM05D005235 ORTHO05D006938 1.9e-158 563.1 499 60.7
Sc01g0007490 Simmondsia chinensis HOM05D005235 ORTHO05D006938 4.2e-158 562.0 488 62.5
AUR62028546 Chenopodium quinoa HOM05D005235 ORTHO05D006938 5.5e-158 561.6 495 60.2
Glyma.14G202100 Glycine max HOM05D005235 ORTHO05D006938 1.6e-157 560.1 434 67.5
arahy.Tifrunner.gnm1.ann1.0Z73T7 Arachis hypogaea HOM05D005235 ORTHO05D006938 2.1e-157 559.7 449 63.9
AUR62033498 Chenopodium quinoa HOM05D005235 ORTHO05D006938 2.1e-157 559.7 495 60.2
FAN08G3020 Fragaria x ananassa HOM05D005235 ORTHO05D006938 2.1e-157 559.7 455 63.7
FAN18G1214 Fragaria x ananassa HOM05D005235 ORTHO05D006938 2.1e-157 559.7 456 63.8
Ah.08g210620 Amaranthus hybridus HOM05D005235 ORTHO05D006938 2.7e-157 559.3 490 61.2
CSS0000006 Camellia sinensis var. sinensis HOM05D005235 ORTHO05D006938 2.7e-157 559.3 439 64.7
CSS0008907 Camellia sinensis var. sinensis HOM05D005235 ORTHO05D006938 2.7e-157 559.3 439 64.7
Medtr3g466250 Medicago truncatula HOM05D005235 ORTHO05D006938 3.6e-157 558.9 496 60.1
Sopen07g004450 Solanum pennellii HOM05D005235 ORTHO05D006938 4.7e-157 558.5 447 64.9
ClCG07G017190 Citrullus lanatus HOM05D005235 ORTHO05D006938 6.1e-157 558.1 502 62.0
Psat5g150600 Pisum sativum HOM05D005235 ORTHO05D006938 6.1e-157 558.1 459 63.2
Medtr4g121070 Medicago truncatula HOM05D005235 ORTHO05D006938 8.0e-157 557.8 479 62.0
Atru.BG.29.p Acer truncatum HOM05D005235 ORTHO05D006938 1.8e-156 556.6 425 68.9
Solyc07g008530.1 Solanum lycopersicum HOM05D005235 ORTHO05D006938 1.8e-156 556.6 447 64.9
arahy.Tifrunner.gnm1.ann1.354T1Y Arachis hypogaea HOM05D005235 ORTHO05D006938 6.8e-156 554.7 458 63.1
TPR.G24949 Trifolium pratense HOM05D005235 ORTHO05D006938 6.8e-156 554.7 492 60.8
CiPaw.03G253600 Carya illinoinensis HOM05D005235 ORTHO05D006938 1.2e-155 553.9 431 66.4
PGSC0003DMG400022992 Solanum tuberosum HOM05D005235 ORTHO05D006938 1.2e-155 553.9 523 58.3
Lj6g0011193 Lotus japonicus HOM05D005235 ORTHO05D006938 1.5e-155 553.5 507 60.0
Peaxi162Scf01038g00005 Petunia axillaris HOM05D005235 ORTHO05D006938 1.5e-155 553.5 471 61.6
Lsat_1_v5_gn_6_15261 Lactuca sativa HOM05D005235 ORTHO05D006938 3.4e-155 552.4 487 60.8
CsaV3_4G004390 Cucumis sativus L. HOM05D005235 ORTHO05D006938 4.4e-155 552.0 432 66.2
Sed0026739 Sechium edule HOM05D005235 ORTHO05D006938 7.5e-155 551.2 478 61.9
PSO566G0178 Papaver somniferum HOM05D005235 ORTHO05D006938 9.8e-155 550.8 433 64.4
Lalb_Chr15g0085971 Lupinus albus HOM05D005235 ORTHO05D006938 2.2e-154 549.7 440 65.2
PSO173G0108 Papaver somniferum HOM05D005235 ORTHO05D006938 6.3e-154 548.1 456 62.1
Ca_15026_v3 Cicer arietinum L. HOM05D005235 ORTHO05D006938 8.3e-154 547.7 444 64.9
Lj3g0002085 Lotus japonicus HOM05D005235 ORTHO05D006938 8.3e-154 547.7 504 59.3
MELO3C017627.2 Cucumis melo HOM05D005235 ORTHO05D006938 1.4e-153 547.0 477 61.8
Glyma.02G234500 Glycine max HOM05D005235 ORTHO05D006938 1.4e-153 547.0 442 65.4
Cc03_g16140 Coffea canephora HOM05D005235 ORTHO05D006938 4.1e-153 545.4 464 62.5
Hund00893 Selenicereus undatus HOM05D005235 ORTHO05D006938 5.4e-153 545.0 426 65.3
TWI32G1353 Tripterygium wilfordii HOM05D005235 ORTHO05D006938 5.4e-153 545.0 434 65.0
Nitab4.5_0000949g0050 Nicotiana tabacum HOM05D005235 ORTHO05D006938 9.1e-153 544.3 442 63.3
VMungo0647G1084 Vigna mungo HOM05D005235 ORTHO05D006938 1.2e-152 543.9 477 60.4
ECA233G3576 Erigeron canadensis HOM05D005235 ORTHO05D006938 2.7e-152 542.7 441 63.7
Nitab4.5_0000491g0060 Nicotiana tabacum HOM05D005235 ORTHO05D006938 1.3e-151 540.4 443 63.2
CAN.G192.3 Capsicum annuum HOM05D005235 ORTHO05D006938 2.2e-151 539.7 467 61.5
DCAR_005998 Daucus carota HOM05D005235 ORTHO05D006938 2.9e-151 539.3 492 58.9
HanXRQChr08g0226751 Helianthus annuus HOM05D005235 ORTHO05D006938 2.9e-151 539.3 477 60.8
SalBow4G1042 Salvia bowleyana HOM05D005235 ORTHO05D006938 3.8e-151 538.9 434 63.6
QL10p019537 Quercus lobata HOM05D005235 ORTHO05D006938 1.9e-150 536.6 491 59.7
Phvul.008G249300 Phaseolus vulgaris HOM05D005235 ORTHO05D006938 2.1e-149 533.1 432 63.4
Actinidia37705 Actinidia chinensis HOM05D005235 ORTHO05D006938 8.0e-149 531.2 424 66.3
Migut.N01688 Erythranthe guttata HOM05D005235 ORTHO05D006938 1.0e-148 530.8 458 60.7
CDE05G0570 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 1.4e-148 530.4 442 62.2
CDE05G2156 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 1.4e-148 530.4 441 62.1
Migut.O00424 Erythranthe guttata HOM05D005235 ORTHO05D006938 6.8e-148 528.1 457 60.8
ATR0021G047 Amborella trichopoda HOM05D005235 ORTHO05D006938 4.4e-147 525.4 455 60.2
MBI04_g19169_MAGBIO Magnolia biondii HOM05D005235 ORTHO05D006938 7.5e-147 524.6 518 54.4
unitig_22.g5329 Utricularia gibba HOM05D005235 ORTHO05D006938 1.3e-146 523.9 431 63.8
Lj8A333T11 Lonicera japonica HOM05D005235 ORTHO05D006938 1.1e-145 520.8 469 60.3
SGA_v2.0_scaffold68G22803 Striga asiatica HOM05D005235 ORTHO05D006938 7.0e-145 518.1 480 58.5
Os01g0500900 Oryza sativa ssp. japonica HOM05D005235 ORTHO05D006938 1.3e-143 513.8 502 56.4
Zm00001eb080850 Zea mays HOM05D005235 ORTHO05D006938 5.0e-143 511.9 470 58.3
AagrBONN_evm.TU.Sc2ySwM_368.429 Anthoceros agrestis HOM05D005235 ORTHO05D006938 8.3e-138 494.6 443 56.9
SMO200G0177 Selaginella moellendorffii HOM05D005235 ORTHO05D006938 3.2e-137 492.7 469 55.0
Nitab4.5_0004867g0070 Nicotiana tabacum HOM05D000907 ORTHO05D000753 6.6e-135 485.0 442 58.8
Mapoly0163s0012 Marchantia polymorpha HOM05D005235 ORTHO05D006938 2.5e-134 483.0 436 56.7
Pp3c3_3070 Physcomitrium patens HOM05D005235 ORTHO05D006938 5.6e-134 481.9 450 55.3
FAN05G2159 Fragaria x ananassa HOM05D005235 ORTHO05D006938 2.5e-126 456.4 424 57.1
MCO13G625 Micromonas commoda HOM05D005235 ORTHO05D006938 1.3e-122 444.1 462 50.6
C03p40250 Brassica napus HOM05D005235 ORTHO05D006938 7.8e-120 434.9 253 88.9
GSVIVG01023528001 Vitis vinifera HOM05D005235 ORTHO05D006938 3.9e-119 432.6 468 53.2
Cre13.g606050 Chlamydomonas reinhardtii HOM05D005235 ORTHO05D006938 4.4e-115 419.1 435 50.6
TAR633G2758 Trochodendron aralioides HOM05D005235 ORTHO05D006938 9.2e-113 411.4 313 66.5
PRCOL_00003633 Prasinoderma coloniale HOM05D005235 ORTHO05D006938 5.1e-111 405.6 500 44.4
SEGI_38902 Sequoiadendron giganteum HOM05D005235 ORTHO05D006938 7.3e-110 401.7 373 55.0
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 7.6e-107 391.7 436 52.5
arahy.Tifrunner.gnm1.ann1.8HX8KM Arachis hypogaea HOM05D005235 ORTHO05D006938 7.1e-105 385.2 410 54.1
CBR_g10848 Chara braunii HOM05D005235 ORTHO05D006938 4.6e-104 382.5 485 44.7
BolC1t05886H Brassica oleracea HOM05D005235 ORTHO05D006938 6.7e-95 352.1 365 57.3
Actinidia19541 Actinidia chinensis HOM05D005235 ORTHO05D006938 1.3e-90 337.8 423 48.0
HPP92_015556 Vanilla planifolia HOM05D005235 ORTHO05D006938 1.1e-76 291.6 223 63.7
FAN04G0607 Fragaria x ananassa HOM05D005235 ORTHO05D006938 3.6e-72 276.6 233 60.1
BNapus_Darmor_BZH_scaffold_133p00140 Brassica napus HOM05D005235 ORTHO05D032674 5.1e-71 272.7 207 72.0
Dinv11903 Davidia involucrata HOM05D005235 ORTHO05D006938 1.4e-68 264.6 375 44.8
Pp3s58_130 Physcomitrium patens HOM05D005235 ORTHO05D006938 5.9e-67 259.2 427 36.1
BcaC09g47648 Brassica carinata HOM05D005235 ORTHO05D032674 1.9e-65 254.2 428 43.9
Oeu046079.2 Olea europaea HOM05D002040 ORTHO05D002502 2.6e-59 233.8 350 42.0
FAN04G0381 Fragaria x ananassa HOM05D005235 ORTHO05D006938 1.1e-54 218.4 166 68.1
Haze_27256 Corylus avellana HOM05D005235 ORTHO05D006938 6.3e-53 212.6 404 34.2
Cfa027221 Carpinus fangiana HOM05D004159 ORTHO05D006938 5.5e-49 199.5 454 30.6
HPP92_015557 Vanilla planifolia HOM05D005235 ORTHO05D006938 6.1e-48 196.1 174 58.6
CDE05G3313 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 4.5e-43 179.9 118 72.0
BraA01t04657Z Brassica rapa HOM05D005235 ORTHO05D032674 2.0e-35 154.5 117 71.8
FAN09G2876 Fragaria x ananassa HOM05D005235 ORTHO05D006938 7.0e-28 129.4 96 61.5
TAR633G1966 Trochodendron aralioides HOM05D005235 ORTHO05D006938 6.6e-26 122.9 114 57.9
Oeu059313.1 Olea europaea HOM05D005235 ORTHO05D006938 8.6e-26 122.5 131 50.4
Thecc.07G136200 Theobroma cacao HOM05D005235 ORTHO05D006938 4.3e-25 120.2 141 48.9
BolC1t05887H Brassica oleracea HOM05D005235 ORTHO05D014124 6.6e-18 96.3 77 76.6
SEGI_33043 Sequoiadendron giganteum HOM05D005235 ORTHO05D008256 4.7e-16 90.1 69 59.4
BNapus_Darmor_BZH_scaffold_119p00120 Brassica napus HOM05D005235 ORTHO05D006938 1.8e-15 88.2 49 85.7
BNapus_Darmor_BZH_scaffold_97p00310 Brassica napus HOM05D005235 ORTHO05D006938 1.8e-15 88.2 49 85.7
Oeu038380.1 Olea europaea HOM05D007843 ORTHO05D003639 1.2e-14 85.5 62 62.9
SEGI_05348 Sequoiadendron giganteum HOM05D005235 ORTHO05D006938 5.8e-14 83.2 62 66.1
Nn1g04561 Nelumbo nucifera HOM05D005235 ORTHO05D038945 2.9e-13 80.9 75 57.3
arahy.Tifrunner.gnm1.ann1.J19R9Y Arachis hypogaea HOM05D005235 ORTHO05D038945 2.8e-08 64.3 36 83.3


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