Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g18430 Brassica carinata HOM05D002513 ORTHO05D002720 1.6e-46 189.1 97 100.0
THA.LOC104798367 Tarenaya hassleriana HOM05D002513 ORTHO05D002720 2.7e-14 82.0 85 55.3
BcaC04g21626 Brassica carinata HOM05D002513 ORTHO05D002720 3.5e-14 81.6 85 55.3
A09p23030 Brassica napus HOM05D002513 ORTHO05D002720 3.5e-14 81.6 85 55.3
C09p29740 Brassica napus HOM05D002513 ORTHO05D002720 3.5e-14 81.6 85 55.3
BolC9t55837H Brassica oleracea HOM05D002513 ORTHO05D002720 3.5e-14 81.6 85 55.3
BraA09t37907Z Brassica rapa HOM05D002513 ORTHO05D002720 3.5e-14 81.6 85 55.3
SGA_v2.0_scaffold199G41180 Striga asiatica HOM05D002513 ORTHO05D002720 3.5e-14 81.6 62 66.1
Thhalv10024408m.g Eutrema salsugineum HOM05D002513 ORTHO05D002720 4.6e-14 81.3 85 54.1
Aa31LG6G140 Aethionema arabicum HOM05D002513 ORTHO05D002720 7.9e-14 80.5 85 54.1
Aa31sc151G10 Aethionema arabicum HOM05D002513 ORTHO05D002720 1.0e-13 80.1 85 54.1
Carub.0008s0036 Capsella rubella HOM05D002513 ORTHO05D002720 1.3e-13 79.7 98 50.0
Thhalv10000768m.g Eutrema salsugineum HOM05D002513 ORTHO05D002720 1.3e-13 79.7 85 54.1
Sp7g16790 Schrenkiella parvula HOM05D002513 ORTHO05D002720 1.8e-13 79.3 85 54.1
AL8G10610 Arabidopsis lyrata HOM05D002513 ORTHO05D002720 2.3e-13 79.0 85 52.9
AT5G47430 Arabidopsis thaliana HOM05D002513 ORTHO05D002720 2.3e-13 79.0 85 52.9
CARHR173950 Cardamine hirsuta HOM05D002513 ORTHO05D002720 2.3e-13 79.0 98 49.0
Sp2g12130 Schrenkiella parvula HOM05D002513 ORTHO05D002720 2.3e-13 79.0 85 54.1
Cfa017519 Carpinus fangiana HOM05D002513 ORTHO05D002720 3.9e-13 78.2 85 55.3
Carub.0007s2401 Capsella rubella HOM05D002513 ORTHO05D002720 5.1e-13 77.8 85 52.9
BcaB07g30777 Brassica carinata HOM05D002513 ORTHO05D002720 6.7e-13 77.4 85 52.9
BcaC09g50468 Brassica carinata HOM05D002513 ORTHO05D002720 1.9e-12 75.9 85 52.9
A01p20000 Brassica napus HOM05D002513 ORTHO05D002720 1.9e-12 75.9 85 52.9
C01p25090 Brassica napus HOM05D002513 ORTHO05D002720 1.9e-12 75.9 85 52.9
BolC1t02460H Brassica oleracea HOM05D002513 ORTHO05D002720 1.9e-12 75.9 85 52.9
BraA01t01923Z Brassica rapa HOM05D002513 ORTHO05D002720 1.9e-12 75.9 85 52.9
Haze_20631 Corylus avellana HOM05D002513 ORTHO05D002720 3.3e-12 75.1 85 54.1
BcaNung00096 Brassica carinata HOM05D002513 ORTHO05D002720 4.3e-12 74.7 85 51.8
CARHR224010 Cardamine hirsuta HOM05D002513 ORTHO05D002720 5.7e-12 74.3 77 53.2
BcaB05g22557 Brassica carinata HOM05D002513 ORTHO05D002720 9.7e-12 73.6 83 51.8
PSO210G4067 Papaver somniferum HOM05D002513 ORTHO05D002720 2.2e-11 72.4 85 50.6
PSO832G0398 Papaver somniferum HOM05D002513 ORTHO05D002720 2.2e-11 72.4 85 50.6
RcHm_v2.0_Chr2g0120501 Rosa chinensis HOM05D002513 ORTHO05D002720 2.2e-11 72.4 87 51.7
Haze_07948 Corylus avellana HOM05D002513 ORTHO05D002720 3.7e-11 71.6 85 52.9
GSVIVG01006271001 Vitis vinifera HOM05D002513 ORTHO05D002720 4.8e-11 71.2 97 49.5
CiPaw.11G081500 Carya illinoinensis HOM05D002513 ORTHO05D002720 8.2e-11 70.5 85 51.8
PGR042G3434 Punica granatum HOM05D002513 ORTHO05D002720 8.2e-11 70.5 85 51.8
Cc08_g12210 Coffea canephora HOM05D002513 ORTHO05D002720 1.1e-10 70.1 85 51.8
Duzib205G1336 Durio zibethinus HOM05D002513 ORTHO05D002720 1.1e-10 70.1 85 51.8
Gohir.A12G215700 Gossypium hirsutum HOM05D002513 ORTHO05D002720 1.1e-10 70.1 85 51.8
Gohir.D12G218300 Gossypium hirsutum HOM05D002513 ORTHO05D002720 1.1e-10 70.1 85 51.8
Gorai.008G233900 Gossypium raimondii HOM05D002513 ORTHO05D002720 1.1e-10 70.1 85 51.8
MD04G1061900 Malus domestica HOM05D002513 ORTHO05D002720 1.1e-10 70.1 85 51.8
Oeu002328.2 Olea europaea HOM05D002513 ORTHO05D002720 1.1e-10 70.1 85 49.4
RcHm_v2.0_Chr7g0203801 Rosa chinensis HOM05D002513 ORTHO05D002720 1.1e-10 70.1 85 51.8
Thecc.03G248600 Theobroma cacao HOM05D002513 ORTHO05D002720 1.1e-10 70.1 85 51.8
AL7G37310 Arabidopsis lyrata HOM05D002513 ORTHO05D002720 1.4e-10 69.7 85 48.2
AT4G17410 Arabidopsis thaliana HOM05D002513 ORTHO05D002720 1.4e-10 69.7 85 48.2
COL.COLO4_37135 Corchorus olitorius HOM05D002513 ORTHO05D002720 1.4e-10 69.7 85 51.8
Duzib068G0483 Durio zibethinus HOM05D002513 ORTHO05D002720 1.4e-10 69.7 97 48.5
Eucgr.E00408 Eucalyptus grandis HOM05D002513 ORTHO05D002720 1.4e-10 69.7 85 50.6
unitig_8.g3015 Utricularia gibba HOM05D002513 ORTHO05D002720 1.4e-10 69.7 71 53.5
Cpa.g.sc53.64 Carica papaya HOM05D002513 ORTHO05D002720 1.8e-10 69.3 97 47.4
FvH4_5g19330 Fragaria vesca HOM05D002513 ORTHO05D002720 1.8e-10 69.3 85 48.2
FAN04G1005 Fragaria x ananassa HOM05D002513 ORTHO05D002720 1.8e-10 69.3 85 48.2
FAN08G2557 Fragaria x ananassa HOM05D002513 ORTHO05D002720 1.8e-10 69.3 85 48.2
FAN18G4043 Fragaria x ananassa HOM05D002513 ORTHO05D002720 1.8e-10 69.3 85 48.2
MD06G1055600 Malus domestica HOM05D002513 ORTHO05D002720 1.8e-10 69.3 85 51.8
QL12p011564 Quercus lobata HOM05D002513 ORTHO05D002720 1.8e-10 69.3 85 50.6
arahy.Tifrunner.gnm1.ann1.3AS7PC Arachis hypogaea HOM05D002513 ORTHO05D002720 2.4e-10 68.9 85 45.9
arahy.Tifrunner.gnm1.ann1.AB5AZK Arachis hypogaea HOM05D002513 ORTHO05D002720 2.4e-10 68.9 85 45.9
arahy.Tifrunner.gnm1.ann1.F98T17 Arachis hypogaea HOM05D002513 ORTHO05D002720 2.4e-10 68.9 85 45.9
arahy.Tifrunner.gnm1.ann1.H0C62V Arachis hypogaea HOM05D002513 ORTHO05D002720 2.4e-10 68.9 85 45.9
arahy.Tifrunner.gnm1.ann1.V507XA Arachis hypogaea HOM05D002513 ORTHO05D002720 2.4e-10 68.9 85 45.9
arahy.Tifrunner.gnm1.ann1.VIP11X Arachis hypogaea HOM05D002513 ORTHO05D002720 2.4e-10 68.9 85 45.9
arahy.Tifrunner.gnm1.ann1.Y2TGKW Arachis hypogaea HOM05D002513 ORTHO05D002720 2.4e-10 68.9 85 45.9
ClCG10G002560 Citrullus lanatus HOM05D002513 ORTHO05D002720 2.4e-10 68.9 85 50.6
CsaV3_3G002590 Cucumis sativus L. HOM05D002513 ORTHO05D002720 2.4e-10 68.9 85 50.6
Prupe.5G066400 Prunus persica HOM05D002513 ORTHO05D002720 2.4e-10 68.9 85 50.6
Atru.chr9.1284 Acer truncatum HOM05D002513 ORTHO05D002720 3.1e-10 68.6 85 48.2
arahy.Tifrunner.gnm1.ann1.40EGC8 Arachis hypogaea HOM05D002513 ORTHO05D002720 3.1e-10 68.6 85 44.7
arahy.Tifrunner.gnm1.ann1.98R2QB Arachis hypogaea HOM05D002513 ORTHO05D002720 3.1e-10 68.6 85 45.9
arahy.Tifrunner.gnm1.ann1.PD7I3L Arachis hypogaea HOM05D002513 ORTHO05D002720 3.1e-10 68.6 85 45.9
CSS0008127 Camellia sinensis var. sinensis HOM05D002513 ORTHO05D002720 3.1e-10 68.6 85 49.4
CANSAT21G1233 Cannabis sativa HOM05D002513 ORTHO05D002720 3.1e-10 68.6 85 50.6
Medtr4g100750 Medicago truncatula HOM05D002513 ORTHO05D002720 3.1e-10 68.6 85 45.9
Rhsim07G0110400 Rhododendron simsii HOM05D002513 ORTHO05D002720 3.1e-10 68.6 97 48.5
Sed0012573 Sechium edule HOM05D002513 ORTHO05D002720 3.1e-10 68.6 98 46.9
Hund14574 Selenicereus undatus HOM05D002513 ORTHO05D002720 3.1e-10 68.6 85 50.6
SGA_v2.0_scaffold104G30173 Striga asiatica HOM05D002513 ORTHO05D002720 3.1e-10 68.6 85 50.6
Hma1.2p1_0316F.1_g122910 Hydrangea macrophylla HOM05D002513 ORTHO05D002720 4.1e-10 68.2 85 49.4
Hma1.2p1_0316F.1_g122915 Hydrangea macrophylla HOM05D002513 ORTHO05D002720 4.1e-10 68.2 85 49.4
Manes.01G082800 Manihot esculenta HOM05D002513 ORTHO05D002720 4.1e-10 68.2 85 50.6
CSS0000182 Camellia sinensis var. sinensis HOM05D002513 ORTHO05D002720 5.3e-10 67.8 85 49.4
ECA240G4211 Erigeron canadensis HOM05D002513 ORTHO05D002720 6.9e-10 67.4 85 49.4
Lalb_Chr16g0386791 Lupinus albus HOM05D002513 ORTHO05D002720 6.9e-10 67.4 85 44.7
Sc01g0008310 Simmondsia chinensis HOM05D002513 ORTHO05D002720 6.9e-10 67.4 85 49.4
MSTRG.12118 Avicennia marina HOM05D002513 ORTHO05D002720 9.0e-10 67.0 85 48.2
Os10g0431000 Oryza sativa ssp. japonica HOM05D002513 ORTHO05D002720 9.0e-10 67.0 85 48.2
THA.LOC104814469 Tarenaya hassleriana HOM05D002513 ORTHO05D002720 9.0e-10 67.0 98 46.9
vmacro00186 Vaccinium macrocarpon HOM05D002513 ORTHO05D002720 9.0e-10 67.0 85 48.2
ATR0697G259 Amborella trichopoda HOM05D002513 ORTHO05D002720 1.2e-09 66.6 85 48.2
Dinv39163 Davidia involucrata HOM05D002513 ORTHO05D002720 1.2e-09 66.6 85 48.2
AUR62018445 Chenopodium quinoa HOM05D002513 ORTHO05D002720 1.5e-09 66.2 85 48.2
AUR62020988 Chenopodium quinoa HOM05D002513 ORTHO05D002720 1.5e-09 66.2 85 48.2
Gohir.A08G168800 Gossypium hirsutum HOM05D002513 ORTHO05D002720 1.5e-09 66.2 85 49.4
Gohir.D08G187300 Gossypium hirsutum HOM05D002513 ORTHO05D002720 1.5e-09 66.2 85 49.4
Gorai.004G197000 Gossypium raimondii HOM05D002513 ORTHO05D002720 1.5e-09 66.2 85 49.4
Lsat_1_v5_gn_6_92441 Lactuca sativa HOM05D002513 ORTHO05D002720 1.5e-09 66.2 85 48.2
Potri.003G078800 Populus trichocarpa HOM05D002513 ORTHO05D002720 1.5e-09 66.2 85 49.4
Ah.13g077420 Amaranthus hybridus HOM05D002513 ORTHO05D002720 2.0e-09 65.9 94 47.9
EL10Ac3g07351 Beta vulgaris HOM05D002513 ORTHO05D002720 2.0e-09 65.9 85 48.2
COL.COLO4_10827 Corchorus olitorius HOM05D002513 ORTHO05D002720 2.0e-09 65.9 99 44.4
PSO761G0561 Papaver somniferum HOM05D002513 ORTHO05D002720 2.0e-09 65.9 75 48.0
SEGI_13497 Sequoiadendron giganteum HOM05D002513 ORTHO05D002720 2.0e-09 65.9 98 44.9
HPP92_004365 Vanilla planifolia HOM05D002513 ORTHO05D002720 2.0e-09 65.9 85 48.2
HPP92_004367 Vanilla planifolia HOM05D002513 ORTHO05D002720 2.0e-09 65.9 85 48.2
Zm00001eb047610 Zea mays HOM05D002513 ORTHO05D002720 2.0e-09 65.9 85 48.2
Rhsim11G0000900 Rhododendron simsii HOM05D002513 ORTHO05D002720 2.6e-09 65.5 85 47.1
MBI11_g31274_MAGBIO Magnolia biondii HOM05D002513 ORTHO05D002720 3.4e-09 65.1 85 48.2
Nn4g26338 Nelumbo nucifera HOM05D002513 ORTHO05D002720 3.4e-09 65.1 85 47.1
Actinidia02147 Actinidia chinensis HOM05D002513 ORTHO05D002720 4.5e-09 64.7 85 49.4
Actinidia14412 Actinidia chinensis HOM05D002513 ORTHO05D002720 4.5e-09 64.7 85 49.4
Aqoxy2G03401 Aquilegia oxysepala HOM05D002513 ORTHO05D002720 4.5e-09 64.7 96 44.8
Ciclev10018818m.g Citrus clementina HOM05D002513 ORTHO05D002720 4.5e-09 64.7 85 49.4
HanXRQChr03g0088821 Helianthus annuus HOM05D002513 ORTHO05D002720 4.5e-09 64.7 85 47.1
HanXRQChr13g0417821 Helianthus annuus HOM05D002513 ORTHO05D002720 4.5e-09 64.7 85 47.1
Lj8A268G24 Lonicera japonica HOM05D002513 ORTHO05D002720 4.5e-09 64.7 85 45.9
PSO210G7426 Papaver somniferum HOM05D002513 ORTHO05D002720 4.5e-09 64.7 96 41.7
Sabra01G0134900 Salix brachista HOM05D002513 ORTHO05D002720 4.5e-09 64.7 85 48.2
Lalb_Chr05g0221181 Lupinus albus HOM05D002513 ORTHO05D002720 5.9e-09 64.3 85 41.2
Ca_21976_v3 Cicer arietinum L. HOM05D002513 ORTHO05D002720 7.6e-09 63.9 85 45.9
MBI05_g42865_MAGBIO Magnolia biondii HOM05D002513 ORTHO05D002720 7.6e-09 63.9 97 43.3
Potri.001G156000 Populus trichocarpa HOM05D002513 ORTHO05D002720 7.6e-09 63.9 85 48.2
TAR629G3140 Trochodendron aralioides HOM05D002513 ORTHO05D002720 7.6e-09 63.9 85 48.2
arahy.Tifrunner.gnm1.ann1.18SBFH Arachis hypogaea HOM05D002513 ORTHO05D002720 1.3e-08 63.2 94 41.5
Ca_03894_v3 Cicer arietinum L. HOM05D002513 ORTHO05D002720 1.3e-08 63.2 85 44.7
Glyma.17G143300 Glycine max HOM05D002513 ORTHO05D002720 1.3e-08 63.2 85 43.5
Lj4g0017155 Lotus japonicus HOM05D002513 ORTHO05D002720 1.3e-08 63.2 85 44.7
Psat4g074080 Pisum sativum HOM05D002513 ORTHO05D002720 1.3e-08 63.2 85 44.7
TAR636G3267 Trochodendron aralioides HOM05D002513 ORTHO05D002720 1.3e-08 63.2 85 45.9
CAN.G841.7 Capsicum annuum HOM05D002513 ORTHO05D002720 1.7e-08 62.8 85 45.9
vmacro14069 Vaccinium macrocarpon HOM05D002513 ORTHO05D002720 1.7e-08 62.8 97 45.4
Migut.A01126 Erythranthe guttata HOM05D002513 ORTHO05D002720 2.2e-08 62.4 85 45.9
FAN13G1831 Fragaria x ananassa HOM05D002513 ORTHO05D002720 2.9e-08 62.0 98 40.8
Glyma.05G061500 Glycine max HOM05D002513 ORTHO05D002720 2.9e-08 62.0 85 42.4
Nn1g02339 Nelumbo nucifera HOM05D002513 ORTHO05D002720 2.9e-08 62.0 85 43.5
Sopen10g032620 Solanum pennellii HOM05D002513 ORTHO05D002720 2.9e-08 62.0 85 44.7
Aqoxy5G00460 Aquilegia oxysepala HOM05D002513 ORTHO05D002720 5.0e-08 61.2 97 41.2
CDE06G2836 Ceratophyllum demersum HOM05D002513 ORTHO05D002720 5.0e-08 61.2 85 47.1
Phvul.003G222100 Phaseolus vulgaris HOM05D002513 ORTHO05D002720 5.0e-08 61.2 85 42.4
Sabra13G0095300 Salix brachista HOM05D002513 ORTHO05D002720 5.0e-08 61.2 87 41.4
VMungo0251G3547 Vigna mungo HOM05D002513 ORTHO05D002720 5.0e-08 61.2 85 42.4
MBI05_g33897_MAGBIO Magnolia biondii HOM05D002513 ORTHO05D002720 6.5e-08 60.8 97 42.3
Manes.16G090800 Manihot esculenta HOM05D002513 ORTHO05D002720 6.5e-08 60.8 87 42.5
TWI81G0262 Tripterygium wilfordii HOM05D002513 ORTHO05D002720 6.5e-08 60.8 98 41.8
TAR633G0646 Trochodendron aralioides HOM05D002513 ORTHO05D002720 8.5e-08 60.5 85 44.7
TAR636G2655 Trochodendron aralioides HOM05D002513 ORTHO05D002720 8.5e-08 60.5 85 44.7
Manes.16G090700 Manihot esculenta HOM05D002513 ORTHO05D002720 1.1e-07 60.1 87 41.4
Lalb_Chr09g0329991 Lupinus albus HOM05D002513 ORTHO05D002720 1.4e-07 59.7 45 57.8
Medtr5g097760 Medicago truncatula HOM05D002513 ORTHO05D002720 1.4e-07 59.7 85 43.5
TPR.G24353 Trifolium pratense HOM05D002513 ORTHO05D002720 1.4e-07 59.7 85 43.5
Lj2A222G48 Lonicera japonica HOM05D002513 ORTHO05D002720 1.9e-07 59.3 85 43.5
Sc22g0000970 Simmondsia chinensis HOM05D002513 ORTHO05D002720 1.9e-07 59.3 63 55.6
Solyc10g083150.3 Solanum lycopersicum HOM05D002513 ORTHO05D002720 2.5e-07 58.9 85 43.5
arahy.Tifrunner.gnm1.ann1.2PBN0R Arachis hypogaea HOM05D002513 ORTHO05D002720 3.2e-07 58.5 77 44.2
Potri.013G112200 Populus trichocarpa HOM05D002513 ORTHO05D002720 4.2e-07 58.2 87 40.2
Ah.12g054290 Amaranthus hybridus HOM05D004377 ORTHO05D005168 5.5e-07 57.8 85 42.4
MBI05_g04442_MAGBIO Magnolia biondii HOM05D002513 ORTHO05D002720 5.5e-07 57.8 85 42.4
Medtr5g081800 Medicago truncatula HOM05D002513 ORTHO05D002720 5.5e-07 57.8 85 41.2
Psat5g188640 Pisum sativum HOM05D002513 ORTHO05D002720 5.5e-07 57.8 85 42.4
Manes.02G092000 Manihot esculenta HOM05D002513 ORTHO05D002720 7.2e-07 57.4 95 40.0
Psat2g178240 Pisum sativum HOM05D002513 ORTHO05D002720 9.3e-07 57.0 99 39.4
SMO115G0156 Selaginella moellendorffii HOM05D002513 ORTHO05D002720 1.2e-06 56.6 85 41.2
AUR62019970 Chenopodium quinoa HOM05D002513 ORTHO05D002720 1.6e-06 56.2 61 50.8
Medtr5g098230 Medicago truncatula HOM05D002513 ORTHO05D002720 1.6e-06 56.2 85 40.0
SHI07795 Sapria himalayana HOM05D002513 ORTHO05D002720 1.6e-06 56.2 78 44.9
EL10Ac5g12361 Beta vulgaris HOM05D002513 ORTHO05D002720 2.7e-06 55.5 85 42.4
Peaxi162Scf01662g00119 Petunia axillaris HOM05D002513 ORTHO05D002720 4.6e-06 54.7 79 44.3
TAR376G1023 Trochodendron aralioides HOM05D002513 ORTHO05D002720 4.6e-06 54.7 44 61.4
PSO210G5624 Papaver somniferum HOM05D002513 ORTHO05D002720 7.9e-06 53.9 97 40.2
PSO761G0324 Papaver somniferum HOM05D002513 ORTHO05D002720 7.9e-06 53.9 97 40.2
Phvul.003G221275 Phaseolus vulgaris HOM05D002513 ORTHO05D002720 7.9e-06 53.9 45 57.8


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