Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g16932 Brassica carinata HOM05D004528 ORTHO05D005815 6.6e-235 817.0 416 100.0
BcaB04g16933 Brassica carinata HOM05D004528 ORTHO05D005815 2.1e-217 758.8 418 93.5
BcaC06g36598 Brassica carinata HOM05D004528 ORTHO05D005815 5.5e-213 744.2 416 92.5
C07p02330 Brassica napus HOM05D004528 ORTHO05D005815 5.5e-213 744.2 416 92.5
BraA07t27910Z Brassica rapa HOM05D004528 ORTHO05D005815 5.5e-213 744.2 416 92.5
A07p01220 Brassica napus HOM05D004528 ORTHO05D005815 2.7e-212 741.9 416 92.3
BolC7t40641H Brassica oleracea HOM05D004528 ORTHO05D005815 7.9e-212 740.3 416 92.3
AL3G48690 Arabidopsis lyrata HOM05D004528 ORTHO05D005815 8.1e-209 730.3 416 90.6
Carub.0003s3385 Capsella rubella HOM05D004528 ORTHO05D005815 1.4e-208 729.6 416 90.6
BcaC05g26001 Brassica carinata HOM05D004528 ORTHO05D005815 5.3e-208 727.6 428 89.0
CARHR109990 Cardamine hirsuta HOM05D004528 ORTHO05D005815 5.3e-208 727.6 416 90.1
BcaB08g34873 Brassica carinata HOM05D004528 ORTHO05D005815 1.5e-207 726.1 416 90.4
C05p19590 Brassica napus HOM05D004528 ORTHO05D005815 2.6e-207 725.3 428 88.8
BolC5t30662H Brassica oleracea HOM05D004528 ORTHO05D005815 2.6e-207 725.3 428 88.8
Thhalv10022707m.g Eutrema salsugineum HOM05D004528 ORTHO05D005815 2.6e-207 725.3 416 90.4
AT2G19560 Arabidopsis thaliana HOM05D004528 ORTHO05D005815 1.6e-204 716.1 416 88.2
Sp3g32930 Schrenkiella parvula HOM05D004528 ORTHO05D005815 1.7e-198 696.0 416 87.3
Aa31LG8G16570 Aethionema arabicum HOM05D004528 ORTHO05D005815 9.3e-197 690.3 416 84.4
THA.LOC104820025 Tarenaya hassleriana HOM05D004528 ORTHO05D005815 8.7e-195 683.7 416 84.1
Gorai.010G082500 Gossypium raimondii HOM05D004528 ORTHO05D005815 8.2e-185 650.6 416 79.8
COL.COLO4_18209 Corchorus olitorius HOM05D004528 ORTHO05D005815 5.9e-183 644.4 416 78.8
Thecc.09G090300 Theobroma cacao HOM05D004528 ORTHO05D005815 6.5e-182 641.0 416 79.1
Manes.16G102700 Manihot esculenta HOM05D004528 ORTHO05D005815 1.9e-181 639.4 416 78.4
RcHm_v2.0_Chr2g0093221 Rosa chinensis HOM05D004528 ORTHO05D005815 5.5e-181 637.9 416 77.4
Duzib150G1454 Durio zibethinus HOM05D004528 ORTHO05D005815 7.2e-181 637.5 411 78.8
Potri.006G221700 Populus trichocarpa HOM05D004528 ORTHO05D005815 1.5e-178 629.8 416 77.4
QL02p062827 Quercus lobata HOM05D004528 ORTHO05D005815 1.5e-178 629.8 412 77.7
CiPaw.03G217000 Carya illinoinensis HOM05D004528 ORTHO05D005815 5.7e-178 627.9 418 77.8
FAN19G1322 Fragaria x ananassa HOM05D004528 ORTHO05D005815 7.4e-178 627.5 416 76.2
FAN23G0078 Fragaria x ananassa HOM05D004528 ORTHO05D005815 7.4e-178 627.5 416 76.0
FvH4_1g07290 Fragaria vesca HOM05D004528 ORTHO05D005815 9.7e-178 627.1 416 76.0
FAN28G2769 Fragaria x ananassa HOM05D004528 ORTHO05D005815 1.7e-177 626.3 416 76.0
CANSAT56G0596 Cannabis sativa HOM05D004528 ORTHO05D005815 2.2e-177 625.9 416 77.4
CANSAT56G1313 Cannabis sativa HOM05D004528 ORTHO05D005815 2.2e-177 625.9 416 77.4
Prupe.7G211100 Prunus persica HOM05D004528 ORTHO05D005815 3.7e-177 625.2 416 76.0
Ciclev10008462m.g Citrus clementina HOM05D004528 ORTHO05D005815 6.3e-177 624.4 416 76.9
MD02G1077700 Malus domestica HOM05D004528 ORTHO05D005815 1.1e-176 623.6 416 76.0
CSS0033534 Camellia sinensis var. sinensis HOM05D004528 ORTHO05D005815 1.4e-176 623.2 416 76.9
MD15G1206300 Malus domestica HOM05D004528 ORTHO05D005815 1.4e-176 623.2 416 76.0
GSVIVG01015212001 Vitis vinifera HOM05D004528 ORTHO05D005815 1.8e-176 622.9 416 76.2
TWI34G0432 Tripterygium wilfordii HOM05D004528 ORTHO05D005815 7.0e-176 620.9 416 75.7
ECA240G0155 Erigeron canadensis HOM05D004528 ORTHO05D005815 1.6e-175 619.8 415 75.9
Haze_25904 Corylus avellana HOM05D004528 ORTHO05D005815 2.6e-175 619.0 413 77.0
SalBow6G2464 Salvia bowleyana HOM05D004528 ORTHO05D005815 2.5e-173 612.5 415 74.9
Lalb_Chr13g0299741 Lupinus albus HOM05D004528 ORTHO05D005815 3.2e-173 612.1 416 76.2
Migut.J00603 Erythranthe guttata HOM05D004528 ORTHO05D005815 4.2e-173 611.7 415 75.7
Dinv36760 Davidia involucrata HOM05D004528 ORTHO05D005815 1.6e-172 609.8 416 75.5
Hma1.2p1_0800F.1_g220090 Hydrangea macrophylla HOM05D004528 ORTHO05D005815 2.1e-172 609.4 413 75.3
VMungo1215G0680 Vigna mungo HOM05D004528 ORTHO05D005815 2.1e-172 609.4 416 75.2
MSTRG.17774 Avicennia marina HOM05D004528 ORTHO05D005815 3.6e-172 608.6 415 74.9
DCAR_011978 Daucus carota HOM05D004528 ORTHO05D005815 4.7e-172 608.2 417 75.5
Glyma.17G055500 Glycine max HOM05D004528 ORTHO05D005815 1.8e-171 606.3 416 74.8
Lj7A674G30 Lonicera japonica HOM05D004528 ORTHO05D005815 1.8e-171 606.3 411 76.6
vmacro17227 Vaccinium macrocarpon HOM05D004528 ORTHO05D005815 4.0e-171 605.1 447 70.9
SGA_v2.0_scaffold62G21604 Striga asiatica HOM05D004528 ORTHO05D005815 8.8e-171 604.0 415 74.7
Phvul.003G137300 Phaseolus vulgaris HOM05D004528 ORTHO05D005815 1.1e-170 603.6 416 74.3
CsaV3_2G001490 Cucumis sativus L. HOM05D004528 ORTHO05D005815 1.5e-170 603.2 411 73.7
MBI01_g09956_MAGBIO Magnolia biondii HOM05D004528 ORTHO05D005815 2.0e-170 602.8 413 74.8
PGR142G0229 Punica granatum HOM05D004528 ORTHO05D005815 2.0e-170 602.8 415 75.2
Sed0012435 Sechium edule HOM05D004528 ORTHO05D005815 2.0e-170 602.8 416 73.6
Cc06_g11330 Coffea canephora HOM05D004528 ORTHO05D005815 3.3e-170 602.1 413 74.3
Glyma.13G103500 Glycine max HOM05D004528 ORTHO05D005815 7.5e-170 600.9 413 74.6
ClCG11G001780 Citrullus lanatus HOM05D004528 ORTHO05D005815 1.7e-169 599.7 416 73.3
Eucgr.C00900 Eucalyptus grandis HOM05D004528 ORTHO05D005815 1.7e-169 599.7 415 73.7
arahy.Tifrunner.gnm1.ann1.A138U3 Arachis hypogaea HOM05D004528 ORTHO05D005815 2.8e-169 599.0 416 73.6
TPR.G3725 Trifolium pratense HOM05D004528 ORTHO05D005815 3.7e-169 598.6 416 74.3
Lsat_1_v5_gn_7_37341 Lactuca sativa HOM05D004528 ORTHO05D005815 1.1e-168 597.0 415 74.0
arahy.Tifrunner.gnm1.ann1.PT0GJ5 Arachis hypogaea HOM05D004528 ORTHO05D005815 2.4e-168 595.9 416 73.3
Psat3g072560 Pisum sativum HOM05D004528 ORTHO05D005815 4.1e-168 595.1 416 73.6
Solyc07g039210.4 Solanum lycopersicum HOM05D004528 ORTHO05D005815 3.5e-167 592.0 415 72.5
PGSC0003DMG400013151 Solanum tuberosum HOM05D004528 ORTHO05D005815 7.7e-167 590.9 415 73.0
TAR626G1836 Trochodendron aralioides HOM05D004528 ORTHO05D005815 1.0e-166 590.5 416 72.6
Oeu018425.1 Olea europaea HOM05D004528 ORTHO05D005815 1.7e-166 589.7 415 74.7
Sopen07g017560 Solanum pennellii HOM05D004528 ORTHO05D005815 1.7e-166 589.7 415 72.3
CAN.G1208.1 Capsicum annuum HOM05D004528 ORTHO05D005815 3.8e-166 588.6 412 72.8
Lj4g0008156 Lotus japonicus HOM05D004528 ORTHO05D005815 1.5e-165 586.6 418 72.5
Nitab4.5_0011030g0010 Nicotiana tabacum HOM05D004528 ORTHO05D005815 3.2e-165 585.5 416 72.4
Aqoxy7G01232 Aquilegia oxysepala HOM05D004528 ORTHO05D005815 1.2e-164 583.6 416 71.6
Medtr7g091650 Medicago truncatula HOM05D004528 ORTHO05D005815 1.4e-163 580.1 417 73.4
Nitab4.5_0005634g0070 Nicotiana tabacum HOM05D004528 ORTHO05D005815 4.0e-163 578.6 422 71.6
AUR62033986 Chenopodium quinoa HOM05D004528 ORTHO05D005815 5.2e-163 578.2 414 71.7
Peaxi162Scf00709g00003 Petunia axillaris HOM05D004528 ORTHO05D005815 6.8e-163 577.8 422 71.1
EL10Ac8g19227 Beta vulgaris HOM05D004528 ORTHO05D005815 5.7e-162 574.7 441 68.5
Gohir.D06G070800 Gossypium hirsutum HOM05D004528 ORTHO05D005815 3.7e-161 572.0 373 78.3
unitig_748.g7306 Utricularia gibba HOM05D004528 ORTHO05D005815 6.3e-161 571.2 432 69.0
Gohir.A06G072200 Gossypium hirsutum HOM05D004528 ORTHO05D005815 1.1e-160 570.5 377 77.2
Actinidia25256 Actinidia chinensis HOM05D004528 ORTHO05D005815 4.1e-160 568.5 412 71.8
Ca_08460_v3 Cicer arietinum L. HOM05D004528 ORTHO05D005815 3.8e-158 562.0 408 71.6
PSO832G3660 Papaver somniferum HOM05D004528 ORTHO05D005815 6.1e-156 554.7 417 68.8
PSO063G0639 Papaver somniferum HOM05D004528 ORTHO05D005815 8.0e-156 554.3 417 69.1
SEGI_06455 Sequoiadendron giganteum HOM05D004528 ORTHO05D005815 4.9e-153 545.0 415 64.6
Cpa.g.sc283.9 Carica papaya HOM05D004528 ORTHO05D005815 2.4e-152 542.7 413 69.5
Nn6g35452 Nelumbo nucifera HOM05D004528 ORTHO05D005815 1.2e-151 540.4 416 68.3
HPP92_010493 Vanilla planifolia HOM05D004528 ORTHO05D005815 2.0e-151 539.7 417 67.1
SHI24590 Sapria himalayana HOM05D004528 ORTHO05D005815 9.5e-149 530.8 412 68.7
A07p01200 Brassica napus HOM05D004528 ORTHO05D005815 1.6e-148 530.0 307 89.3
MELO3C004622.2 Cucumis melo HOM05D004528 ORTHO05D005815 4.1e-144 515.4 416 65.1
Sc18g0002070 Simmondsia chinensis HOM05D004528 ORTHO05D005815 7.0e-144 514.6 373 71.8
AUR62027494 Chenopodium quinoa HOM05D004528 ORTHO05D005815 1.2e-140 503.8 414 65.0
Os09g0386400 Oryza sativa ssp. japonica HOM05D004528 ORTHO05D005815 3.6e-140 502.3 412 61.9
Mapoly0005s0151 Marchantia polymorpha HOM05D004528 ORTHO05D005815 3.4e-138 495.7 412 61.4
Rhsim05G0022000 Rhododendron simsii HOM05D004528 ORTHO05D005815 6.0e-135 485.0 325 76.3
BcaB03g16691 Brassica carinata HOM05D004528 ORTHO05D005815 5.0e-134 481.9 313 81.5
Sabra06G0171200 Salix brachista HOM05D004528 ORTHO05D005815 2.5e-133 479.6 487 57.5
Pp3c17_12810 Physcomitrium patens HOM05D004528 ORTHO05D005815 3.9e-126 455.7 400 59.0
AagrBONN_evm.TU.Sc2ySwM_344.906 Anthoceros agrestis HOM05D004528 ORTHO05D005815 4.3e-125 452.2 414 55.8
SMO117G0048 Selaginella moellendorffii HOM05D004528 ORTHO05D005815 6.2e-124 448.4 407 54.1
FAN26G2732 Fragaria x ananassa HOM05D004528 ORTHO05D005815 5.8e-122 441.8 296 77.7
FAN26G1375 Fragaria x ananassa HOM05D004528 ORTHO05D005815 2.9e-121 439.5 296 77.4
Atru.chr7.1579 Acer truncatum HOM05D004528 ORTHO05D005815 4.6e-119 432.2 298 73.8
BcaB03g16690 Brassica carinata HOM05D004528 ORTHO05D005815 1.5e-117 427.2 284 79.2
Hma1.2p1_0800F.1_g220100 Hydrangea macrophylla HOM05D004528 ORTHO05D005815 9.6e-109 397.9 258 78.7
BcaB03g16744 Brassica carinata HOM05D004528 ORTHO05D005815 1.2e-103 380.9 293 73.7
Zm00001eb311810 Zea mays HOM05D004528 ORTHO05D005815 1.1e-99 367.9 258 71.3
CDE02G2136 Ceratophyllum demersum HOM05D004528 ORTHO05D005815 5.5e-96 355.5 316 60.1
HPP92_010492 Vanilla planifolia HOM05D004528 ORTHO05D005815 3.0e-94 349.7 287 64.5
CBR_g78884 Chara braunii HOM05D004528 ORTHO05D005815 3.0e-86 323.2 345 48.4
CARHR052830 Cardamine hirsuta HOM05D004528 ORTHO05D005815 5.7e-77 292.4 240 66.2
Ca_30052_v3 Cicer arietinum L. HOM05D004528 ORTHO05D005815 2.6e-74 283.5 180 78.3
CARHR051760 Cardamine hirsuta HOM05D004528 ORTHO05D005815 4.5e-74 282.7 191 75.4
HanXRQChr09g0238111 Helianthus annuus HOM05D004528 ORTHO05D005815 1.7e-73 280.8 184 75.0
Oeu018237.1 Olea europaea HOM05D004528 ORTHO05D005815 1.1e-64 251.5 191 68.6
CARHR054270 Cardamine hirsuta HOM05D004528 ORTHO05D005815 9.1e-59 231.9 206 64.1
CARHR052790 Cardamine hirsuta HOM05D004528 ORTHO05D005815 8.5e-57 225.3 199 66.3
PGSC0003DMG400022053 Solanum tuberosum HOM05D004528 ORTHO05D005815 1.1e-56 224.9 175 67.4
CARHR051750 Cardamine hirsuta HOM05D004528 ORTHO05D005815 1.6e-55 221.1 161 75.2
ATR0026G021 Amborella trichopoda HOM05D004528 ORTHO05D005815 5.2e-54 216.1 131 82.4
CARHR122320 Cardamine hirsuta HOM05D004528 ORTHO05D005815 1.2e-53 214.9 177 69.5
MD15G1352000 Malus domestica HOM05D004528 ORTHO05D005815 1.3e-52 211.5 230 50.0
MCO16G315 Micromonas commoda HOM05D004528 ORTHO05D005815 8.2e-52 208.8 404 32.9
Cre02.g110400 Chlamydomonas reinhardtii HOM05D004528 ORTHO05D005815 3.5e-50 203.4 404 31.4
CARHR122310 Cardamine hirsuta HOM05D004528 ORTHO05D005815 2.7e-47 193.7 128 78.1
arahy.Tifrunner.gnm1.ann1.43843R Arachis hypogaea HOM05D004528 ORTHO05D005815 4.0e-46 189.9 122 75.4
Sp2g03965 Schrenkiella parvula HOM05D004528 ORTHO05D005815 1.5e-45 188.0 114 82.5
PRCOL_00001383 Prasinoderma coloniale HOM05D004528 ORTHO05D005815 2.0e-45 187.6 323 32.8
arahy.Tifrunner.gnm1.ann1.VVLB7Q Arachis hypogaea HOM05D004528 ORTHO05D005815 2.3e-41 174.1 102 82.4
arahy.Tifrunner.gnm1.ann1.DFU5EN Arachis hypogaea HOM05D004528 ORTHO05D005815 1.7e-33 147.9 83 84.3
Ah.14g085220 Amaranthus hybridus HOM05D004528 ORTHO05D005815 7.3e-32 142.5 416 28.8
RcHm_v2.0_Chr7g0206721 Rosa chinensis HOM05D004528 ORTHO05D005815 2.0e-26 124.4 115 60.9
ATR0026G011 Amborella trichopoda HOM05D004528 ORTHO05D005815 2.3e-25 120.9 107 54.2
BcaC03g15601 Brassica carinata HOM05D004528 ORTHO05D032255 4.0e-22 110.2 127 58.3
BolC2t09319H Brassica oleracea HOM05D004528 ORTHO05D032255 1.2e-21 108.6 143 51.7
C02p33900 Brassica napus HOM05D004528 ORTHO05D032255 6.4e-20 102.8 146 50.0
RcHm_v2.0_Chr7g0207111 Rosa chinensis HOM05D004528 ORTHO05D005815 8.3e-20 102.4 113 54.9
ATR0026G010 Amborella trichopoda HOM05D004528 ORTHO05D005815 1.4e-19 101.7 82 65.9
CARHR054280 Cardamine hirsuta HOM05D004528 ORTHO05D005815 5.0e-17 93.2 72 72.2
FAN23G1719 Fragaria x ananassa HOM05D004528 ORTHO05D005815 9.5e-16 89.0 51 82.4
Sopen12g027230 Solanum pennellii HOM05D004528 ORTHO05D051045 4.7e-15 86.7 153 37.3
CARHR054260 Cardamine hirsuta HOM05D004528 ORTHO05D005815 3.1e-14 84.0 54 77.8
RcHm_v2.0_Chr7g0207281 Rosa chinensis HOM05D004528 ORTHO05D005815 5.4e-11 73.2 54 72.2
arahy.Tifrunner.gnm1.ann1.1S90RN Arachis hypogaea HOM05D004528 ORTHO05D005815 3.0e-09 67.4 57 61.4
arahy.Tifrunner.gnm1.ann1.UXE40S Arachis hypogaea HOM05D004528 ORTHO05D005815 3.3e-08 63.9 81 44.4
RcHm_v2.0_Chr7g0230831 Rosa chinensis HOM05D004528 ORTHO05D005815 5.6e-08 63.2 38 78.9


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