Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g07144 Brassica carinata HOM05D000609 ORTHO05D000462 3.3e-47 191.4 101 100.0
BcaB02g07145 Brassica carinata HOM05D000609 ORTHO05D000462 3.3e-47 191.4 101 100.0
BcaC08g45439 Brassica carinata HOM05D000609 ORTHO05D000462 3.3e-47 191.4 101 100.0
C06p30690 Brassica napus HOM05D000609 ORTHO05D000462 3.3e-47 191.4 101 100.0
BolC6t38233H Brassica oleracea HOM05D000609 ORTHO05D000462 1.6e-46 189.1 101 99.0
BcaB02g07143 Brassica carinata HOM05D000609 ORTHO05D000462 9.3e-42 173.3 92 100.0
BraA07t30413Z Brassica rapa HOM05D000609 ORTHO05D000462 4.2e-34 147.9 89 91.0
A07p27710 Brassica napus HOM05D000609 ORTHO05D000462 5.5e-34 147.5 89 91.0
BcaC08g47381 Brassica carinata HOM05D000609 ORTHO05D000462 3.1e-29 131.7 91 79.1
C06p52030 Brassica napus HOM05D000609 ORTHO05D000462 3.1e-29 131.7 91 79.1
BolC6t40226H Brassica oleracea HOM05D000609 ORTHO05D000462 3.1e-29 131.7 91 79.1
BcaB02g07146 Brassica carinata HOM05D000609 ORTHO05D000462 1.5e-28 129.4 93 81.7
BraA07t31852Z Brassica rapa HOM05D000609 ORTHO05D000462 1.5e-28 129.4 91 78.0
A07p43310 Brassica napus HOM05D000609 ORTHO05D000462 2.0e-28 129.0 91 78.0
Sp5g33210 Schrenkiella parvula HOM05D000609 ORTHO05D000462 1.7e-27 125.9 98 72.4
AT1G78080 Arabidopsis thaliana HOM05D000609 ORTHO05D000462 9.4e-26 120.2 93 74.2
Thhalv10018771m.g Eutrema salsugineum HOM05D000609 ORTHO05D000462 2.1e-25 119.0 100 69.0
A02p21960 Brassica napus HOM05D000609 ORTHO05D000462 2.7e-25 118.6 90 74.4
BraA02t07201Z Brassica rapa HOM05D000609 ORTHO05D000462 2.7e-25 118.6 90 74.4
BcaB03g15973 Brassica carinata HOM05D000609 ORTHO05D000462 7.9e-25 117.1 91 73.6
CARHR071540 Cardamine hirsuta HOM05D000609 ORTHO05D000462 2.8e-22 108.6 96 68.8
Aa31LG4G8120 Aethionema arabicum HOM05D000609 ORTHO05D000462 5.9e-20 100.9 115 57.4
BcaB05g25096 Brassica carinata HOM05D000609 ORTHO05D000462 2.2e-19 99.0 90 64.4
AL2G38380 Arabidopsis lyrata HOM05D000609 ORTHO05D000462 1.1e-18 96.7 97 60.8
BcaC03g15788 Brassica carinata HOM05D000609 ORTHO05D000462 5.5e-18 94.4 49 89.8
BolC2t09547H Brassica oleracea HOM05D000609 ORTHO05D000462 5.5e-18 94.4 49 89.8
Aa31LG7G6150 Aethionema arabicum HOM05D000609 ORTHO05D000462 9.4e-18 93.6 103 59.2
THA.LOC104800157 Tarenaya hassleriana HOM05D000609 ORTHO05D000462 4.7e-17 91.3 91 58.2
Carub.0002s2497 Capsella rubella HOM05D000609 ORTHO05D000462 7.9e-17 90.5 103 60.2
C02p35300 Brassica napus HOM05D000609 ORTHO05D000462 1.0e-16 90.1 90 57.8
Thhalv10008326m.g Eutrema salsugineum HOM05D000609 ORTHO05D000462 2.6e-15 85.5 103 56.3
Sp1g19690 Schrenkiella parvula HOM05D000609 ORTHO05D000462 4.1e-13 78.2 66 65.2
CARHR022540 Cardamine hirsuta HOM05D000609 ORTHO05D000462 2.6e-12 75.5 105 51.4
AT1G22190 Arabidopsis thaliana HOM05D000609 ORTHO05D000462 4.5e-12 74.7 91 57.1
BcaB07g32238 Brassica carinata HOM05D000609 ORTHO05D000462 4.5e-12 74.7 92 54.3
C05p21310 Brassica napus HOM05D000609 ORTHO05D000462 5.9e-12 74.3 87 54.0
BolC5t30829H Brassica oleracea HOM05D000609 ORTHO05D000462 5.9e-12 74.3 87 54.0
BcaC05g26146 Brassica carinata HOM05D000609 ORTHO05D000462 1.0e-11 73.6 87 52.9
A09p42580 Brassica napus HOM05D000609 ORTHO05D000462 1.0e-11 73.6 87 52.9
BraA09t39733Z Brassica rapa HOM05D000609 ORTHO05D000462 1.0e-11 73.6 87 52.9
AL1G35640 Arabidopsis lyrata HOM05D000609 ORTHO05D000462 6.5e-11 70.9 94 54.3
THA.LOC104810880 Tarenaya hassleriana HOM05D000609 ORTHO05D000462 3.2e-10 68.6 104 44.2
Haze_00582 Corylus avellana HOM05D000609 ORTHO05D000462 1.2e-09 66.6 96 49.0
CiPaw.06G020700 Carya illinoinensis HOM05D000609 ORTHO05D000462 2.1e-09 65.9 93 47.3
CiPaw.05G236200 Carya illinoinensis HOM05D000609 ORTHO05D000462 2.7e-09 65.5 100 47.0
Carub.0001s2174 Capsella rubella HOM05D000609 ORTHO05D000462 3.6e-09 65.1 95 50.5
Cpa.g.sc36.112 Carica papaya HOM05D000609 ORTHO05D000462 3.6e-09 65.1 113 42.5
Sabra02G0074300 Salix brachista HOM05D000609 ORTHO05D000462 6.1e-09 64.3 67 59.7
Cfa015912 Carpinus fangiana HOM05D000609 ORTHO05D000462 1.0e-08 63.5 96 46.9
Potri.002G094200 Populus trichocarpa HOM05D000609 ORTHO05D000462 2.3e-08 62.4 54 63.0
Duzib116G0733 Durio zibethinus HOM05D000609 ORTHO05D000462 8.8e-08 60.5 88 47.7
Atru.chr13.1231 Acer truncatum HOM05D000609 ORTHO05D000462 1.1e-07 60.1 45 68.9
COL.COLO4_16434 Corchorus olitorius HOM05D000609 ORTHO05D000462 2.0e-07 59.3 70 51.4
Gohir.A06G037400 Gossypium hirsutum HOM05D000609 ORTHO05D000462 2.6e-07 58.9 94 46.8
Lj1g0021142 Lotus japonicus HOM05D000609 ORTHO05D000462 3.3e-07 58.5 87 48.3
Medtr3g074130 Medicago truncatula HOM05D000609 ORTHO05D000462 3.3e-07 58.5 102 44.1
CSS0038555 Camellia sinensis var. sinensis HOM05D000609 ORTHO05D000462 4.4e-07 58.2 64 53.1
Dinv44756 Davidia involucrata HOM05D000609 ORTHO05D000462 4.4e-07 58.2 73 47.9
Gohir.D06G038900 Gossypium hirsutum HOM05D000609 ORTHO05D000462 4.4e-07 58.2 83 45.8
Gorai.010G043200 Gossypium raimondii HOM05D000609 ORTHO05D000462 4.4e-07 58.2 83 45.8
Actinidia30757 Actinidia chinensis HOM05D000609 ORTHO05D000462 5.7e-07 57.8 58 51.7
Lalb_Chr08g0241941 Lupinus albus HOM05D000609 ORTHO05D000462 5.7e-07 57.8 108 41.7
Thecc.08G109900 Theobroma cacao HOM05D000609 ORTHO05D000462 5.7e-07 57.8 106 41.5
VMungo1309G1651 Vigna mungo HOM05D000609 ORTHO05D000462 5.7e-07 57.8 97 41.2
Manes.02G154400 Manihot esculenta HOM05D000609 ORTHO05D000462 7.5e-07 57.4 53 60.4
Phvul.009G029600 Phaseolus vulgaris HOM05D000609 ORTHO05D000462 7.5e-07 57.4 104 43.3
Gohir.D02G083100 Gossypium hirsutum HOM05D000609 ORTHO05D000462 9.7e-07 57.0 90 46.7
Gorai.005G093500 Gossypium raimondii HOM05D000609 ORTHO05D000462 9.7e-07 57.0 90 46.7
Potri.005G168700 Populus trichocarpa HOM05D000609 ORTHO05D000462 9.7e-07 57.0 93 45.2
TPR.G35202 Trifolium pratense HOM05D000609 ORTHO05D000462 9.7e-07 57.0 104 45.2
Duzib093G0350 Durio zibethinus HOM05D000609 ORTHO05D000462 1.3e-06 56.6 90 45.6
Psat5g137480 Pisum sativum HOM05D000609 ORTHO05D000462 1.3e-06 56.6 103 45.6
Actinidia10308 Actinidia chinensis HOM05D000609 ORTHO05D000462 1.7e-06 56.2 86 44.2
CSS0016833 Camellia sinensis var. sinensis HOM05D000609 ORTHO05D000462 1.7e-06 56.2 41 65.9
Glyma.06G105000 Glycine max HOM05D000609 ORTHO05D000462 1.7e-06 56.2 91 46.2
Lalb_Chr11g0065511 Lupinus albus HOM05D000609 ORTHO05D000462 1.7e-06 56.2 97 44.3
Manes.18G069000 Manihot esculenta HOM05D000609 ORTHO05D000462 3.7e-06 55.1 106 38.7
TWI56G1017 Tripterygium wilfordii HOM05D000609 ORTHO05D000462 3.7e-06 55.1 105 44.8
MSTRG.22142 Avicennia marina HOM05D000609 ORTHO05D000462 4.8e-06 54.7 43 65.1
TAR628G1355 Trochodendron aralioides HOM05D000609 ORTHO05D000462 4.8e-06 54.7 50 52.0
Lalb_Chr10g0102251 Lupinus albus HOM05D000609 ORTHO05D000462 6.3e-06 54.3 92 45.7
Gohir.A02G075900 Gossypium hirsutum HOM05D000609 ORTHO05D000462 8.2e-06 53.9 90 44.4


User provided reference genes

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