Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g03733 Brassica carinata HOM05D004503 ORTHO05D005460 4.2e-92 341.3 163 100.0
BcaC01g05572 Brassica carinata HOM05D004503 ORTHO05D005460 1.1e-89 333.2 158 100.0
A03p21010 Brassica napus HOM05D004503 ORTHO05D005460 1.1e-89 333.2 158 100.0
C03p24750 Brassica napus HOM05D004503 ORTHO05D005460 1.1e-89 333.2 158 100.0
BolC3t14864H Brassica oleracea HOM05D004503 ORTHO05D005460 1.1e-89 333.2 158 100.0
BraA03t11340Z Brassica rapa HOM05D004503 ORTHO05D005460 1.1e-89 333.2 158 100.0
Sp4g20340 Schrenkiella parvula HOM05D004503 ORTHO05D005460 9.6e-89 330.1 158 98.1
Thhalv10016232m.g Eutrema salsugineum HOM05D004503 ORTHO05D005460 2.8e-88 328.6 158 97.5
Carub.0004s1999 Capsella rubella HOM05D004503 ORTHO05D005460 4.0e-87 324.7 158 95.6
CARHR132590 Cardamine hirsuta HOM05D004503 ORTHO05D005460 4.5e-86 321.2 158 94.3
AL4G35000 Arabidopsis lyrata HOM05D004503 ORTHO05D005460 1.7e-85 319.3 157 94.9
AT2G38020 Arabidopsis thaliana HOM05D004503 ORTHO05D005460 3.8e-85 318.2 157 94.3
Aa31LG5G23690 Aethionema arabicum HOM05D004503 ORTHO05D005460 3.5e-83 311.6 157 91.7
Cpa.g.sc648.4 Carica papaya HOM05D004503 ORTHO05D005460 7.9e-83 310.5 157 90.4
THA.LOC104826541 Tarenaya hassleriana HOM05D004503 ORTHO05D005460 1.3e-82 309.7 157 91.1
Duzib138G1342 Durio zibethinus HOM05D004503 ORTHO05D005460 8.7e-82 307.0 157 89.2
Eucgr.A02017 Eucalyptus grandis HOM05D004503 ORTHO05D005460 1.1e-81 306.6 158 86.7
Ciclev10030701m.g Citrus clementina HOM05D004503 ORTHO05D005460 5.6e-81 304.3 158 86.7
Potri.005G204400 Populus trichocarpa HOM05D004503 ORTHO05D005460 9.6e-81 303.5 157 86.6
Sabra05G0155000 Salix brachista HOM05D004503 ORTHO05D005460 1.3e-80 303.1 157 86.0
Gorai.001G211500 Gossypium raimondii HOM05D004503 ORTHO05D005460 2.1e-80 302.4 157 87.3
COL.COLO4_08894 Corchorus olitorius HOM05D004503 ORTHO05D005460 2.8e-80 302.0 157 86.0
Thecc.01G170000 Theobroma cacao HOM05D004503 ORTHO05D005460 8.2e-80 300.4 157 87.3
Gohir.A07G183000 Gossypium hirsutum HOM05D004503 ORTHO05D005460 1.1e-79 300.1 157 86.6
Manes.02G088300 Manihot esculenta HOM05D004503 ORTHO05D005460 1.4e-79 299.7 158 87.3
GSVIVG01020844001 Vitis vinifera HOM05D004503 ORTHO05D005460 2.4e-79 298.9 158 84.8
Potri.002G057800 Populus trichocarpa HOM05D004503 ORTHO05D005460 5.3e-79 297.7 157 85.4
ClCG11G016490 Citrullus lanatus HOM05D004503 ORTHO05D005460 6.9e-79 297.4 158 82.9
CsaV3_4G031940 Cucumis sativus L. HOM05D004503 ORTHO05D005460 6.9e-79 297.4 158 82.9
MELO3C026971.2 Cucumis melo HOM05D004503 ORTHO05D005460 9.0e-79 297.0 158 82.3
TWI14G0297 Tripterygium wilfordii HOM05D004503 ORTHO05D005460 1.5e-78 296.2 158 82.3
FAN05G2445 Fragaria x ananassa HOM05D004503 ORTHO05D005460 5.8e-78 294.3 158 81.6
FAN09G1308 Fragaria x ananassa HOM05D004503 ORTHO05D005460 5.8e-78 294.3 158 81.6
PGR042G1526 Punica granatum HOM05D004503 ORTHO05D005460 5.8e-78 294.3 158 83.5
Sed0003027 Sechium edule HOM05D004503 ORTHO05D005460 7.6e-78 293.9 157 83.4
FAN02G3131 Fragaria x ananassa HOM05D004503 ORTHO05D005460 1.3e-77 293.1 158 81.0
Atru.chr6.2055 Acer truncatum HOM05D004503 ORTHO05D005460 1.7e-77 292.7 158 84.2
CANSAT64G0633 Cannabis sativa HOM05D004503 ORTHO05D005460 2.2e-77 292.4 157 84.1
RcHm_v2.0_Chr2g0152001 Rosa chinensis HOM05D004503 ORTHO05D005460 4.9e-77 291.2 158 80.4
FvH4_6g38590 Fragaria vesca HOM05D004503 ORTHO05D005460 1.1e-76 290.0 158 81.0
FAN14G5858 Fragaria x ananassa HOM05D004503 ORTHO05D005460 1.1e-76 290.0 158 81.0
CSS0024997 Camellia sinensis var. sinensis HOM05D004503 ORTHO05D005460 4.2e-76 288.1 157 82.8
Dinv07955 Davidia involucrata HOM05D004503 ORTHO05D005460 4.2e-76 288.1 157 81.5
Nn4g24335 Nelumbo nucifera HOM05D004503 ORTHO05D005460 4.2e-76 288.1 157 82.2
TAR629G1355 Trochodendron aralioides HOM05D004503 ORTHO05D005460 5.5e-76 287.7 157 82.8
Ah.05g168350 Amaranthus hybridus HOM05D004503 ORTHO05D005460 4.6e-75 284.6 156 80.1
MD17G1136200 Malus domestica HOM05D004503 ORTHO05D005460 4.6e-75 284.6 158 80.4
Hund26670 Selenicereus undatus HOM05D004503 ORTHO05D005460 4.6e-75 284.6 156 82.1
Actinidia12541 Actinidia chinensis HOM05D004503 ORTHO05D005460 1.3e-74 283.1 157 81.5
arahy.Tifrunner.gnm1.ann1.S01VYL Arachis hypogaea HOM05D004503 ORTHO05D005460 1.3e-74 283.1 157 79.6
AUR62034921 Chenopodium quinoa HOM05D004503 ORTHO05D005460 1.3e-74 283.1 156 80.8
Lalb_Chr07g0191281 Lupinus albus HOM05D004503 ORTHO05D005460 3.0e-74 282.0 158 78.5
Sc09g0009430 Simmondsia chinensis HOM05D004503 ORTHO05D005460 3.0e-74 282.0 157 81.5
AUR62026613 Chenopodium quinoa HOM05D004503 ORTHO05D005460 5.1e-74 281.2 156 80.1
Psat5g185680 Pisum sativum HOM05D004503 ORTHO05D005460 5.1e-74 281.2 158 77.8
Prupe.3G176600 Prunus persica HOM05D004503 ORTHO05D005460 6.7e-74 280.8 158 78.5
arahy.Tifrunner.gnm1.ann1.96CX7H Arachis hypogaea HOM05D004503 ORTHO05D005460 8.7e-74 280.4 157 79.0
EL10Ac1g01630 Beta vulgaris HOM05D004503 ORTHO05D005460 8.7e-74 280.4 156 79.5
Ca_14599_v3 Cicer arietinum L. HOM05D004503 ORTHO05D005460 1.9e-73 279.3 158 77.2
SHI12362 Sapria himalayana HOM05D004503 ORTHO05D005460 1.9e-73 279.3 158 77.2
Lj6g0014906 Lotus japonicus HOM05D004503 ORTHO05D005460 2.5e-73 278.9 158 77.2
Medtr0071s0030 Medicago truncatula HOM05D004503 ORTHO05D005460 4.3e-73 278.1 158 75.9
Medtr3g046640 Medicago truncatula HOM05D004503 ORTHO05D005460 4.3e-73 278.1 158 75.9
Sopen07g029580 Solanum pennellii HOM05D004503 ORTHO05D005460 1.6e-72 276.2 159 79.9
vmacro08730 Vaccinium macrocarpon HOM05D004503 ORTHO05D005460 1.6e-72 276.2 158 80.4
Nitab4.5_0002251g0070 Nicotiana tabacum HOM05D004503 ORTHO05D005460 2.2e-72 275.8 159 79.2
Rhsim12G0009900 Rhododendron simsii HOM05D004503 ORTHO05D005460 2.2e-72 275.8 158 79.7
Glyma.18G109800 Glycine max HOM05D004503 ORTHO05D005460 2.8e-72 275.4 158 75.9
PGSC0003DMG400017305 Solanum tuberosum HOM05D004503 ORTHO05D005460 4.8e-72 274.6 159 79.2
Lj1C677T5 Lonicera japonica HOM05D004503 ORTHO05D005460 6.3e-72 274.2 157 79.0
Solyc07g056220.3 Solanum lycopersicum HOM05D004503 ORTHO05D005460 1.1e-71 273.5 159 79.2
Phvul.006G022400 Phaseolus vulgaris HOM05D004503 ORTHO05D005460 1.8e-71 272.7 158 75.9
Glyma.08G307900 Glycine max HOM05D004503 ORTHO05D005460 4.1e-71 271.6 158 74.1
VMungo0647G0468 Vigna mungo HOM05D004503 ORTHO05D005460 4.1e-71 271.6 158 74.7
Nitab4.5_0027860g0010 Nicotiana tabacum HOM05D004503 ORTHO05D005460 9.0e-71 270.4 159 77.4
HanXRQChr13g0387771 Helianthus annuus HOM05D004503 ORTHO05D005460 1.5e-70 269.6 158 75.3
HanXRQChr13g0403751 Helianthus annuus HOM05D004503 ORTHO05D005460 1.5e-70 269.6 158 75.3
MBI10_g05864_MAGBIO Magnolia biondii HOM05D004503 ORTHO05D005460 1.5e-70 269.6 157 79.0
Cfa009838 Carpinus fangiana HOM05D004503 ORTHO05D005460 7.7e-70 267.3 160 77.5
Haze_23205 Corylus avellana HOM05D004503 ORTHO05D005460 7.7e-70 267.3 160 77.5
Actinidia25072 Actinidia chinensis HOM05D004503 ORTHO05D005460 5.0e-69 264.6 145 82.8
Peaxi162Scf00111g00222 Petunia axillaris HOM05D004503 ORTHO05D005460 5.0e-69 264.6 159 74.2
Aqoxy1G01732 Aquilegia oxysepala HOM05D004503 ORTHO05D005460 1.4e-68 263.1 157 75.8
Lsat_1_v5_gn_8_31680 Lactuca sativa HOM05D004503 ORTHO05D005460 1.9e-68 262.7 157 73.2
Oeu010987.1 Olea europaea HOM05D004503 ORTHO05D005460 1.9e-68 262.7 157 77.1
PSO675G5402 Papaver somniferum HOM05D004503 ORTHO05D005460 3.2e-68 261.9 158 75.9
CiPaw.13G152400 Carya illinoinensis HOM05D004503 ORTHO05D005460 4.2e-68 261.5 160 75.6
SGA_v2.0_scaffold70G23615 Striga asiatica HOM05D004503 ORTHO05D005460 9.4e-68 260.4 157 74.5
PSO063G7036 Papaver somniferum HOM05D004503 ORTHO05D005460 1.2e-67 260.0 158 75.3
QL01p017640 Quercus lobata HOM05D004503 ORTHO05D005460 1.2e-67 260.0 159 75.5
MSTRG.6739 Avicennia marina HOM05D004503 ORTHO05D005460 3.6e-67 258.5 157 75.8
Migut.M00558 Erythranthe guttata HOM05D004503 ORTHO05D005460 1.0e-66 256.9 157 73.9
CAN.G585.22 Capsicum annuum HOM05D004503 ORTHO05D005460 3.0e-66 255.4 159 75.5
DCAR_013322 Daucus carota HOM05D004503 ORTHO05D005460 3.0e-66 255.4 156 74.4
SEGI_01586 Sequoiadendron giganteum HOM05D004503 ORTHO05D005460 3.0e-66 255.4 154 74.7
HPP92_024256 Vanilla planifolia HOM05D004503 ORTHO05D005460 5.1e-66 254.6 149 76.5
HPP92_024264 Vanilla planifolia HOM05D004503 ORTHO05D005460 5.1e-66 254.6 149 76.5
Cc05_g09730 Coffea canephora HOM05D004503 ORTHO05D005460 5.7e-65 251.1 157 73.2
ECA233G4498 Erigeron canadensis HOM05D004503 ORTHO05D005460 4.8e-64 248.1 159 68.6
MBI10_g02225_MAGBIO Magnolia biondii HOM05D004503 ORTHO05D005460 4.2e-60 235.0 157 73.2
ATR0772G123 Amborella trichopoda HOM05D004503 ORTHO05D005460 9.4e-60 233.8 155 63.9
TPR.G16790 Trifolium pratense HOM05D004503 ORTHO05D005460 3.7e-56 221.9 126 78.6
vmacro23147 Vaccinium macrocarpon HOM05D004503 ORTHO05D005460 4.5e-54 214.9 155 70.3
Mapoly0052s0038 Marchantia polymorpha HOM05D004503 ORTHO05D005460 1.0e-53 213.8 155 60.6
BcaNung06337 Brassica carinata HOM05D004503 ORTHO05D005460 1.5e-52 209.9 98 100.0
Pp3c13_19740 Physcomitrium patens HOM05D004503 ORTHO05D005460 2.1e-51 206.1 154 56.5
SMO358G0621 Selaginella moellendorffii HOM05D004503 ORTHO05D005460 3.9e-50 201.8 154 55.8
AagrBONN_evm.TU.Sc2ySwM_368.858 Anthoceros agrestis HOM05D004503 ORTHO05D005460 2.0e-49 199.5 151 55.6
BcaB02g09224 Brassica carinata HOM05D004503 ORTHO05D005460 3.0e-42 175.6 113 73.5
Gohir.D07G189800 Gossypium hirsutum HOM05D004503 ORTHO05D005460 1.4e-34 150.2 74 86.5
CBR_g46726 Chara braunii HOM05D004503 ORTHO05D005460 8.3e-32 141.0 157 39.5
PGR042G2164 Punica granatum HOM05D004503 ORTHO05D005460 7.8e-22 107.8 57 87.7
Os01g0666800 Oryza sativa ssp. japonica HOM05D004503 ORTHO05D005460 7.3e-20 101.3 183 32.2
MBI10_g21107_MAGBIO Magnolia biondii HOM05D004503 ORTHO05D005460 1.8e-18 96.7 145 43.4
C04p09630 Brassica napus HOM05D004503 ORTHO05D005460 1.5e-17 93.6 87 60.9
BolC4t22570H Brassica oleracea HOM05D004503 ORTHO05D005460 1.5e-17 93.6 87 60.9
PRCOL_00002554 Prasinoderma coloniale HOM05D004503 ORTHO05D005460 8.3e-16 87.8 157 32.5
Cfa025981 Carpinus fangiana HOM05D004503 ORTHO05D005460 1.1e-15 87.4 151 33.1
Cre03.g199311 Chlamydomonas reinhardtii HOM05D004503 ORTHO05D005460 1.3e-13 80.5 150 27.3


User provided reference genes

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