Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g02662 Brassica carinata HOM05D003763 ORTHO05D004315 2.3e-163 578.9 322 100.0
BcaC01g04611 Brassica carinata HOM05D003763 ORTHO05D004315 4.3e-157 558.1 322 97.5
C03p35720 Brassica napus HOM05D003763 ORTHO05D004315 4.3e-157 558.1 322 97.5
BolC3t15881H Brassica oleracea HOM05D003763 ORTHO05D004315 3.6e-156 555.1 322 97.2
A03p29510 Brassica napus HOM05D003763 ORTHO05D004315 6.4e-153 544.3 322 96.3
BraA03t12145Z Brassica rapa HOM05D003763 ORTHO05D004315 6.4e-153 544.3 322 96.3
Sp6g05550 Schrenkiella parvula HOM05D003763 ORTHO05D004315 1.2e-151 540.0 327 92.7
Thhalv10028695m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 2.3e-150 535.8 325 92.9
AT4G11960 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 2.5e-141 505.8 319 90.6
CARHR254330 Cardamine hirsuta HOM05D003763 ORTHO05D004315 4.3e-141 505.0 323 90.1
AL6G46730 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 4.8e-140 501.5 318 89.9
Aa31LG9G10510 Aethionema arabicum HOM05D003763 ORTHO05D004315 1.8e-139 499.6 327 87.5
THA.LOC104806356 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 1.8e-139 499.6 325 88.0
Carub.0006s3106 Capsella rubella HOM05D003763 ORTHO05D004315 7.1e-136 487.6 323 87.6
THA.LOC104814132 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 7.1e-136 487.6 325 87.7
Sp7g20960 Schrenkiella parvula HOM05D003763 ORTHO05D004315 3.9e-134 481.9 325 84.9
AT4G22890 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 9.0e-131 470.7 325 82.2
Aa31LG6G4960 Aethionema arabicum HOM05D003763 ORTHO05D004315 2.0e-130 469.5 329 82.1
A03p53850 Brassica napus HOM05D003763 ORTHO05D004315 2.2e-129 466.1 323 82.7
C07p52250 Brassica napus HOM05D003763 ORTHO05D004315 4.9e-129 464.9 323 82.4
Thhalv10025739m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 1.1e-128 463.8 322 82.9
BolC7t45719H Brassica oleracea HOM05D003763 ORTHO05D004315 3.2e-128 462.2 323 82.0
A01p14110 Brassica napus HOM05D003763 ORTHO05D004315 4.2e-128 461.8 317 83.6
BraA01t01359Z Brassica rapa HOM05D003763 ORTHO05D004315 4.2e-128 461.8 317 83.6
BcaC09g51065 Brassica carinata HOM05D003763 ORTHO05D004315 5.5e-128 461.5 317 83.3
C01p17370 Brassica napus HOM05D003763 ORTHO05D004315 2.7e-127 459.1 317 83.0
BolC1t01675H Brassica oleracea HOM05D003763 ORTHO05D004315 2.7e-127 459.1 317 83.0
BcaNung01019 Brassica carinata HOM05D003763 ORTHO05D004315 1.0e-126 457.2 318 83.0
Carub.0007s1839 Capsella rubella HOM05D003763 ORTHO05D004315 4.3e-125 451.8 323 81.7
COL.COLO4_23800 Corchorus olitorius HOM05D003763 ORTHO05D004315 5.0e-121 438.3 323 78.3
Thecc.03G267900 Theobroma cacao HOM05D003763 ORTHO05D004315 6.1e-119 431.4 323 76.5
TWI81G0532 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 7.9e-119 431.0 326 77.0
BcaNung01664 Brassica carinata HOM05D003763 ORTHO05D004315 3.9e-118 428.7 276 87.3
Dinv37708 Davidia involucrata HOM05D003763 ORTHO05D004315 3.9e-118 428.7 325 77.2
BraA03t14454Z Brassica rapa HOM05D003763 ORTHO05D004315 8.7e-118 427.6 299 83.3
TWI60G0957 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 8.7e-118 427.6 325 77.8
CARHR229930 Cardamine hirsuta HOM05D003763 ORTHO05D004315 1.1e-117 427.2 322 78.0
Gohir.D08G195200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 1.5e-117 426.8 323 77.4
Cpa.g.sc29.40 Carica papaya HOM05D003763 ORTHO05D004315 2.5e-117 426.0 323 77.4
Phvul.003G213900 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 3.3e-117 425.6 326 77.9
Manes.01G070000 Manihot esculenta HOM05D003763 ORTHO05D004315 4.3e-117 425.2 325 77.2
Lj4g0003870 Lotus japonicus HOM05D003763 ORTHO05D004315 9.7e-117 424.1 325 77.8
Gorai.004G206000 Gossypium raimondii HOM05D003763 ORTHO05D004315 2.2e-116 422.9 328 75.6
Cfa012069 Carpinus fangiana HOM05D003763 ORTHO05D004315 6.3e-116 421.4 328 76.5
Ca_20236_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 1.4e-115 420.2 328 77.4
arahy.Tifrunner.gnm1.ann1.QN4KPS Arachis hypogaea HOM05D003763 ORTHO05D004315 3.1e-115 419.1 334 76.0
Duzib205G0169 Durio zibethinus HOM05D003763 ORTHO05D004315 3.1e-115 419.1 324 76.9
Glyma.05G051300 Glycine max HOM05D003763 ORTHO05D004315 4.1e-115 418.7 328 76.5
Glyma.17G133200 Glycine max HOM05D003763 ORTHO05D004315 6.9e-115 417.9 339 74.6
Duzib084G0949 Durio zibethinus HOM05D003763 ORTHO05D004315 1.5e-114 416.8 323 75.5
CSS0018103 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 3.4e-114 415.6 330 74.2
CANSAT21G0452 Cannabis sativa HOM05D003763 ORTHO05D004315 4.5e-114 415.2 324 75.9
Ciclev10021127m.g Citrus clementina HOM05D003763 ORTHO05D004315 7.7e-114 414.5 329 76.6
Lalb_Chr05g0214701 Lupinus albus HOM05D003763 ORTHO05D004315 1.0e-113 414.1 324 76.5
CAN.G1394.10 Capsicum annuum HOM05D003763 ORTHO05D004315 1.3e-113 413.7 325 75.4
VMungo1215G3348 Vigna mungo HOM05D003763 ORTHO05D004315 1.3e-113 413.7 359 70.8
Prupe.5G086900 Prunus persica HOM05D003763 ORTHO05D004315 8.5e-113 411.0 324 75.3
GSVIVG01019890001 Vitis vinifera HOM05D003763 ORTHO05D004315 8.5e-113 411.0 328 75.0
CiPaw.12G101000 Carya illinoinensis HOM05D003763 ORTHO05D004315 1.9e-112 409.8 330 73.9
MD04G1071000 Malus domestica HOM05D003763 ORTHO05D004315 1.9e-112 409.8 326 74.8
Medtr4g102440 Medicago truncatula HOM05D003763 ORTHO05D004315 1.9e-112 409.8 325 76.9
Eucgr.D01944 Eucalyptus grandis HOM05D003763 ORTHO05D004315 2.5e-112 409.5 334 72.2
Oeu056817.1 Olea europaea HOM05D003763 ORTHO05D004315 7.2e-112 407.9 333 72.4
Atru.chr9.1500 Acer truncatum HOM05D003763 ORTHO05D004315 1.2e-111 407.1 327 75.8
PGSC0003DMG400012494 Solanum tuberosum HOM05D003763 ORTHO05D004315 1.6e-111 406.8 325 74.8
vmacro14015 Vaccinium macrocarpon HOM05D003763 ORTHO05D004315 1.6e-111 406.8 343 73.8
FvH4_5g01180 Fragaria vesca HOM05D003763 ORTHO05D004315 2.1e-111 406.4 332 73.5
Peaxi162Scf00102g01354 Petunia axillaris HOM05D003763 ORTHO05D004315 2.1e-111 406.4 327 73.4
Cc08_g13730 Coffea canephora HOM05D003763 ORTHO05D004315 2.7e-111 406.0 324 74.4
DCAR_000890 Daucus carota HOM05D003763 ORTHO05D004315 2.7e-111 406.0 321 75.4
Gorai.008G242200 Gossypium raimondii HOM05D003763 ORTHO05D004315 3.6e-111 405.6 323 74.9
Sopen08g003700 Solanum pennellii HOM05D003763 ORTHO05D004315 3.6e-111 405.6 324 74.7
FAN04G0845 Fragaria x ananassa HOM05D003763 ORTHO05D004315 4.6e-111 405.2 327 74.0
Gohir.D12G226200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 4.6e-111 405.2 323 74.9
TPR.G37646 Trifolium pratense HOM05D003763 ORTHO05D004315 4.6e-111 405.2 339 71.7
CSS0001568 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 6.1e-111 404.8 321 75.1
FAN13G2490 Fragaria x ananassa HOM05D003763 ORTHO05D004315 6.1e-111 404.8 332 73.2
RcHm_v2.0_Chr7g0199911 Rosa chinensis HOM05D003763 ORTHO05D004315 7.9e-111 404.4 326 74.5
CAN.G981.62 Capsicum annuum HOM05D003763 ORTHO05D004315 1.4e-110 403.7 325 72.6
FAN08G0919 Fragaria x ananassa HOM05D003763 ORTHO05D004315 1.4e-110 403.7 328 74.1
Sed0026462 Sechium edule HOM05D003763 ORTHO05D004315 1.8e-110 403.3 305 76.4
FAN18G3786 Fragaria x ananassa HOM05D003763 ORTHO05D004315 2.3e-110 402.9 330 73.3
TAR622G0836 Trochodendron aralioides HOM05D003763 ORTHO05D004315 3.0e-110 402.5 336 72.9
Potri.001G113000 Populus trichocarpa HOM05D003763 ORTHO05D004315 3.9e-110 402.1 328 73.2
TAR629G0773 Trochodendron aralioides HOM05D003763 ORTHO05D004315 6.7e-110 401.4 327 72.8
Nitab4.5_0010547g0050 Nicotiana tabacum HOM05D003763 ORTHO05D004315 1.1e-109 400.6 330 72.4
Sabra03G0083200 Salix brachista HOM05D003763 ORTHO05D004315 2.0e-109 399.8 326 73.6
MELO3C014009.2 Cucumis melo HOM05D003763 ORTHO05D004315 2.5e-109 399.4 320 74.1
Potri.003G119200 Populus trichocarpa HOM05D003763 ORTHO05D004315 2.5e-109 399.4 328 72.9
SalBow6G0972 Salvia bowleyana HOM05D003763 ORTHO05D004315 5.7e-109 398.3 325 73.5
VMungo1215G1438 Vigna mungo HOM05D003763 ORTHO05D004315 5.7e-109 398.3 327 71.9
arahy.Tifrunner.gnm1.ann1.HFU20B Arachis hypogaea HOM05D003763 ORTHO05D004315 7.4e-109 397.9 328 75.0
Psat4g068320 Pisum sativum HOM05D003763 ORTHO05D004315 7.4e-109 397.9 328 72.3
Ah.12g057870 Amaranthus hybridus HOM05D003763 ORTHO05D004315 9.7e-109 397.5 329 72.0
Sc22g0000420 Simmondsia chinensis HOM05D003763 ORTHO05D004315 9.7e-109 397.5 326 72.1
PGSC0003DMG400022731 Solanum tuberosum HOM05D003763 ORTHO05D004315 9.7e-109 397.5 324 72.2
arahy.Tifrunner.gnm1.ann1.RZ3A35 Arachis hypogaea HOM05D003763 ORTHO05D004315 1.3e-108 397.1 329 74.5
Lsat_1_v5_gn_6_78800 Lactuca sativa HOM05D003763 ORTHO05D004315 1.3e-108 397.1 327 71.6
CsaV3_3G003430 Cucumis sativus L. HOM05D003763 ORTHO05D004315 1.7e-108 396.7 315 74.0
Sopen08g028400 Solanum pennellii HOM05D003763 ORTHO05D004315 3.7e-108 395.6 325 72.0
Glyma.01G214300 Glycine max HOM05D003763 ORTHO05D004315 6.3e-108 394.8 323 72.8
MSTRG.13805 Avicennia marina HOM05D003763 ORTHO05D004315 1.8e-107 393.3 327 71.3
Migut.E01271 Erythranthe guttata HOM05D003763 ORTHO05D004315 4.1e-107 392.1 324 71.9
Oeu021144.1 Olea europaea HOM05D003763 ORTHO05D004315 4.1e-107 392.1 284 78.5
Hund14702 Selenicereus undatus HOM05D003763 ORTHO05D004315 4.1e-107 392.1 329 70.5
Nn1g01278 Nelumbo nucifera HOM05D003763 ORTHO05D004315 6.9e-107 391.3 324 72.8
EL10Ac5g12684 Beta vulgaris HOM05D003763 ORTHO05D004315 9.1e-107 391.0 330 70.6
Migut.A00895 Erythranthe guttata HOM05D003763 ORTHO05D004315 1.2e-106 390.6 318 72.0
Migut.E01022 Erythranthe guttata HOM05D003763 ORTHO05D004315 1.5e-106 390.2 324 71.6
Hma1.2p1_0138F.1_g062780 Hydrangea macrophylla HOM05D003763 ORTHO05D004315 2.0e-106 389.8 335 70.1
HanXRQChr13g0414021 Helianthus annuus HOM05D003763 ORTHO05D004315 1.0e-105 387.5 328 72.0
Phvul.002G152800 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 5.0e-105 385.2 326 69.3
AUR62010559 Chenopodium quinoa HOM05D003763 ORTHO05D004315 1.4e-104 383.6 327 70.9
Sed0016409 Sechium edule HOM05D003763 ORTHO05D004315 1.9e-104 383.3 267 80.9
ECA240G4155 Erigeron canadensis HOM05D003763 ORTHO05D004315 2.5e-104 382.9 329 69.6
Rhsim07G0096500 Rhododendron simsii HOM05D003763 ORTHO05D004315 2.5e-104 382.9 382 65.2
Ca_24565_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 3.2e-104 382.5 323 71.5
AUR62017330 Chenopodium quinoa HOM05D003763 ORTHO05D004315 4.2e-104 382.1 327 71.3
CDE04G2291 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 5.5e-104 381.7 277 77.6
Medtr5g011220 Medicago truncatula HOM05D003763 ORTHO05D004315 1.2e-103 380.6 329 72.3
Aqoxy7G00504 Aquilegia oxysepala HOM05D003763 ORTHO05D004315 7.9e-103 377.9 327 69.7
ClCG00G002290 Citrullus lanatus HOM05D003763 ORTHO05D004315 1.4e-102 377.1 295 76.3
Lsat_1_v5_gn_6_8180 Lactuca sativa HOM05D003763 ORTHO05D004315 1.4e-102 377.1 330 69.4
Lj2g0000892 Lotus japonicus HOM05D003763 ORTHO05D004315 3.0e-102 375.9 323 71.2
Nitab4.5_0002886g0120 Nicotiana tabacum HOM05D003763 ORTHO05D004315 3.0e-102 375.9 324 63.3
PSO478G4698 Papaver somniferum HOM05D003763 ORTHO05D004315 3.9e-102 375.6 324 70.1
PSO782G5713 Papaver somniferum HOM05D003763 ORTHO05D004315 1.1e-101 374.0 325 68.9
Actinidia27416 Actinidia chinensis HOM05D003763 ORTHO05D004315 3.3e-101 372.5 254 85.0
unitig_52.g17229 Utricularia gibba HOM05D003763 ORTHO05D004315 1.8e-99 366.7 313 71.2
Nitab4.5_0001200g0070 Nicotiana tabacum HOM05D003763 ORTHO05D004315 3.1e-99 365.9 257 72.4
SalBow1G0491 Salvia bowleyana HOM05D003763 ORTHO05D004315 3.1e-99 365.9 288 74.3
PGR031G0886 Punica granatum HOM05D003763 ORTHO05D004315 1.2e-98 364.0 322 70.2
Lj8C243T4 Lonicera japonica HOM05D003763 ORTHO05D004315 1.7e-97 360.1 262 81.7
Solyc08g007770.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 3.8e-97 359.0 308 71.8
AL7G30630 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 1.5e-96 357.1 231 89.6
Solyc08g080050.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 2.5e-96 356.3 299 71.9
HanXRQChr03g0084111 Helianthus annuus HOM05D003763 ORTHO05D004315 2.0e-93 346.7 308 68.8
Lj2A202G55 Lonicera japonica HOM05D003763 ORTHO05D004315 7.5e-93 344.7 273 72.9
arahy.Tifrunner.gnm1.ann1.N69HTX Arachis hypogaea HOM05D003763 ORTHO05D004315 9.7e-93 344.4 334 67.1
ATR0661G459 Amborella trichopoda HOM05D003763 ORTHO05D004315 1.3e-92 344.0 275 72.7
Gohir.A08G176900 Gossypium hirsutum HOM05D003763 ORTHO05D004315 2.8e-92 342.8 231 86.1
Zm00001eb064990 Zea mays HOM05D003763 ORTHO05D004315 9.1e-91 337.8 323 64.1
Os03g0857400 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 1.6e-90 337.0 311 66.2
Haze_08989 Corylus avellana HOM05D003763 ORTHO05D004315 1.0e-89 334.3 304 70.7
Actinidia14012 Actinidia chinensis HOM05D003763 ORTHO05D004315 1.9e-88 330.1 249 79.1
Nitab4.5_0003274g0090 Nicotiana tabacum HOM05D003763 ORTHO05D004315 2.3e-86 323.2 323 56.3
Peaxi162Scf00620g00056 Petunia axillaris HOM05D003763 ORTHO05D004315 1.1e-83 314.3 356 58.4
ClCG00G000150 Citrullus lanatus HOM05D003763 ORTHO05D004315 7.0e-83 311.6 319 63.0
ClCG10G003400 Citrullus lanatus HOM05D003763 ORTHO05D004315 7.0e-83 311.6 319 63.0
Mapoly0048s0082 Marchantia polymorpha HOM05D003763 ORTHO05D004315 2.0e-82 310.1 323 60.1
Pp3c10_15390 Physcomitrium patens HOM05D003763 ORTHO05D004315 1.3e-81 307.4 276 62.3
SEGI_18243 Sequoiadendron giganteum HOM05D003763 ORTHO05D004315 1.3e-81 307.4 267 64.4
SMO356G0021 Selaginella moellendorffii HOM05D003763 ORTHO05D004315 8.3e-76 288.1 250 58.4
AagrBONN_evm.TU.Sc2ySwM_362.2619 Anthoceros agrestis HOM05D003763 ORTHO05D004315 1.6e-74 283.9 250 59.2
Psat2g180880 Pisum sativum HOM05D003763 ORTHO05D004315 8.6e-73 278.1 253 71.1
unitig_699.g19760 Utricularia gibba HOM05D003763 ORTHO05D004315 1.5e-72 277.3 250 70.8
CiPaw.11G143200 Carya illinoinensis HOM05D003763 ORTHO05D004315 1.2e-71 274.2 236 74.2
Dinv39038 Davidia involucrata HOM05D003763 ORTHO05D004315 1.0e-70 271.2 247 72.9
Psat6g136800 Pisum sativum HOM05D003763 ORTHO05D004315 1.0e-70 271.2 196 82.7
Actinidia05236 Actinidia chinensis HOM05D003763 ORTHO05D004315 1.8e-70 270.4 247 61.1
CBR_g23735 Chara braunii HOM05D003763 ORTHO05D004315 5.8e-61 238.8 274 47.1
Cre07.g340200 Chlamydomonas reinhardtii HOM05D003763 ORTHO05D004315 2.8e-55 219.9 289 48.1
Zm00001eb065010 Zea mays HOM05D003763 ORTHO05D004315 3.7e-52 209.5 149 71.8
Gohir.A12G223632 Gossypium hirsutum HOM05D003763 ORTHO05D004315 5.6e-48 195.7 124 79.0
Glyma.12G170600 Glycine max HOM05D003763 ORTHO05D004315 2.8e-47 193.4 149 68.5
CDE07G1293 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 4.7e-47 192.6 125 74.4
MSTRG.12034 Avicennia marina HOM05D003763 ORTHO05D004315 2.9e-44 183.3 190 65.3
CDE07G1747 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 1.9e-43 180.6 165 72.1
Gohir.A12G223566 Gossypium hirsutum HOM05D003763 ORTHO05D004315 4.3e-40 169.5 110 75.5
BcaC02g09855 Brassica carinata HOM05D003763 ORTHO05D004315 1.6e-34 151.0 170 61.8
HPP92_014954 Vanilla planifolia HOM05D003763 ORTHO05D004315 2.3e-33 147.1 100 80.0
Zm00001eb305640 Zea mays HOM05D003763 ORTHO05D004315 2.8e-31 140.2 78 85.9
Actinidia02868 Actinidia chinensis HOM05D003763 ORTHO05D004315 1.8e-30 137.5 262 37.8
TPR.G14577 Trifolium pratense HOM05D003763 ORTHO05D004315 3.1e-30 136.7 108 74.1
Lsat_1_v5_gn_8_1701 Lactuca sativa HOM05D003763 ORTHO05D004315 9.0e-30 135.2 96 69.8
C04p35880 Brassica napus HOM05D003763 ORTHO05D004315 7.9e-26 122.1 171 57.3
Zm00001eb065020 Zea mays HOM05D003763 ORTHO05D004315 1.1e-22 111.7 91 63.7
Pp3c3_19870 Physcomitrium patens HOM05D003763 ORTHO05D004315 8.7e-17 92.0 107 65.4
Os08g0526300 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 4.3e-16 89.7 83 80.7
TPR.G23383 Trifolium pratense HOM05D003424 ORTHO05D004025 4.8e-15 86.3 122 46.7
BolC4t25212H Brassica oleracea HOM05D003763 ORTHO05D004315 1.2e-13 81.6 73 60.3
arahy.Tifrunner.gnm1.ann1.AG3Z3P Arachis hypogaea HOM05D003763 ORTHO05D004315 1.6e-10 71.2 93 45.2


User provided reference genes

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