Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.2567 Acer truncatum HOM05D005515 ORTHO05D006620 1.5e-43 179.5 118 100.0
Dinv25661 Davidia involucrata HOM05D005515 ORTHO05D006620 9.9e-35 150.2 117 76.1
Haze_14873 Corylus avellana HOM05D005515 ORTHO05D006620 6.4e-34 147.5 111 75.7
Aqoxy7G00951 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 4.1e-33 144.8 112 82.1
Aqoxy5G03385 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 1.6e-32 142.9 111 82.0
Prupe.3G305900 Prunus persica HOM05D005515 ORTHO05D006620 1.6e-32 142.9 111 84.7
Aqoxy2G02223 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 2.7e-32 142.1 112 80.4
Ciclev10017250m.g Citrus clementina HOM05D005515 ORTHO05D006620 2.7e-32 142.1 111 83.8
Sc07g0003980 Simmondsia chinensis HOM05D005515 ORTHO05D006620 3.5e-32 141.7 111 82.0
CANSAT11G1216 Cannabis sativa HOM05D005515 ORTHO05D006620 6.0e-32 141.0 111 75.7
CiPaw.04G036400 Carya illinoinensis HOM05D005515 ORTHO05D006620 6.0e-32 141.0 111 67.6
Eucgr.I01648 Eucalyptus grandis HOM05D005515 ORTHO05D006620 6.0e-32 141.0 107 81.3
MD09G1011100 Malus domestica HOM05D005515 ORTHO05D006620 6.0e-32 141.0 111 72.1
TAR374G0204 Trochodendron aralioides HOM05D005515 ORTHO05D006620 1.3e-31 139.8 113 80.5
FAN09G0415 Fragaria x ananassa HOM05D005515 ORTHO05D006620 1.7e-31 139.4 113 78.8
Gohir.D07G235400 Gossypium hirsutum HOM05D005515 ORTHO05D006620 2.3e-31 139.0 111 82.0
Manes.15G160700 Manihot esculenta HOM05D005515 ORTHO05D006620 2.3e-31 139.0 111 84.7
Rhsim10G0006500 Rhododendron simsii HOM05D005515 ORTHO05D006620 2.3e-31 139.0 109 79.8
Duzib147G1212 Durio zibethinus HOM05D005515 ORTHO05D006620 5.1e-31 137.9 111 84.7
HPP92_000347 Vanilla planifolia HOM05D005515 ORTHO05D006620 5.1e-31 137.9 116 77.6
GSVIVG01033096001 Vitis vinifera HOM05D005515 ORTHO05D006620 5.1e-31 137.9 111 81.1
FAN05G2195 Fragaria x ananassa HOM05D005515 ORTHO05D006620 6.6e-31 137.5 113 77.9
Gohir.A05G338800 Gossypium hirsutum HOM05D005515 ORTHO05D006620 6.6e-31 137.5 111 79.3
TAR622G0361 Trochodendron aralioides HOM05D005515 ORTHO05D006620 8.6e-31 137.1 111 82.0
Cc11_g16850 Coffea canephora HOM05D005515 ORTHO05D006620 1.1e-30 136.7 112 83.9
Dinv10962 Davidia involucrata HOM05D000504 ORTHO05D006620 1.5e-30 136.3 109 84.4
Lj1g0017105 Lotus japonicus HOM05D005515 ORTHO05D006620 1.5e-30 136.3 115 77.4
Potri.001G330400 Populus trichocarpa HOM05D005515 ORTHO05D006620 1.5e-30 136.3 112 74.1
TWI36G0725 Tripterygium wilfordii HOM05D005515 ORTHO05D006620 1.5e-30 136.3 113 81.4
Gorai.001G271200 Gossypium raimondii HOM05D005515 ORTHO05D006620 2.5e-30 135.6 111 81.1
CSS0007323 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 3.3e-30 135.2 109 65.1
FvH4_6g53480 Fragaria vesca HOM05D005515 ORTHO05D006620 3.3e-30 135.2 111 73.0
EL10Ac6g15358 Beta vulgaris HOM05D005515 ORTHO05D006620 4.3e-30 134.8 111 64.0
Lalb_Chr22g0360381 Lupinus albus HOM05D005515 ORTHO05D006620 5.6e-30 134.4 114 77.2
Potri.017G069200 Populus trichocarpa HOM05D005515 ORTHO05D006620 9.6e-30 133.7 115 81.7
Gohir.A07G228200 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.2e-29 133.3 111 80.2
Gohir.D04G077100 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.2e-29 133.3 111 80.2
Nitab4.5_0003376g0030 Nicotiana tabacum HOM05D005515 ORTHO05D006620 1.2e-29 133.3 111 82.9
Nitab4.5_0008640g0020 Nicotiana tabacum HOM05D005515 ORTHO05D006620 1.2e-29 133.3 111 82.9
AUR62017824 Chenopodium quinoa HOM05D005515 ORTHO05D006620 1.6e-29 132.9 111 64.9
Glyma.19G091000 Glycine max HOM05D005515 ORTHO05D006620 1.6e-29 132.9 114 75.4
Gorai.012G087000 Gossypium raimondii HOM05D005515 ORTHO05D006620 1.6e-29 132.9 112 78.6
Oeu041666.1 Olea europaea HOM05D005515 ORTHO05D006620 1.6e-29 132.9 111 78.4
Psat3g175680 Pisum sativum HOM05D005515 ORTHO05D006620 2.1e-29 132.5 117 59.0
Thecc.04G035700 Theobroma cacao HOM05D005515 ORTHO05D006620 2.1e-29 132.5 111 82.9
Medtr7g033490 Medicago truncatula HOM05D005515 ORTHO05D006620 2.8e-29 132.1 113 61.9
Glyma.16G056700 Glycine max HOM05D005515 ORTHO05D006620 3.6e-29 131.7 114 77.2
Phvul.001G093800 Phaseolus vulgaris HOM05D005515 ORTHO05D006620 3.6e-29 131.7 114 76.3
Zm00001eb364510 Zea mays HOM05D005515 ORTHO05D006620 3.6e-29 131.7 110 60.0
FAN02G1022 Fragaria x ananassa HOM05D005515 ORTHO05D006620 4.7e-29 131.3 111 75.7
Peaxi162Scf00881g00228 Petunia axillaris HOM05D005515 ORTHO05D006620 4.7e-29 131.3 112 79.5
Duzib187G1157 Durio zibethinus HOM05D005515 ORTHO05D006620 1.1e-28 130.2 111 82.9
Solyc02g068110.4 Solanum lycopersicum HOM05D005515 ORTHO05D006620 1.1e-28 130.2 111 81.1
Duzib264G0697 Durio zibethinus HOM05D005515 ORTHO05D006620 1.4e-28 129.8 111 81.1
Hund04339 Selenicereus undatus HOM05D005515 ORTHO05D006620 1.4e-28 129.8 111 76.6
TPR.G38294 Trifolium pratense HOM05D005515 ORTHO05D006620 1.4e-28 129.8 114 58.8
SEGI_35944 Sequoiadendron giganteum HOM05D005515 ORTHO05D006620 1.8e-28 129.4 117 72.6
Lsat_1_v5_gn_8_147620 Lactuca sativa HOM05D005515 ORTHO05D006620 3.1e-28 128.6 112 78.6
Os01g0920200 Oryza sativa ssp. japonica HOM05D005515 ORTHO05D006620 6.9e-28 127.5 107 70.1
Zm00001eb143260 Zea mays HOM05D005515 ORTHO05D006620 6.9e-28 127.5 108 57.4
arahy.Tifrunner.gnm1.ann1.W7YL8X Arachis hypogaea HOM05D005515 ORTHO05D006620 2.0e-27 125.9 113 78.8
arahy.Tifrunner.gnm1.ann1.Y4DWZG Arachis hypogaea HOM05D005515 ORTHO05D006620 2.0e-27 125.9 113 78.8
PSO063G5856 Papaver somniferum HOM05D005515 ORTHO05D006620 2.6e-27 125.6 111 75.7
PSO782G3173 Papaver somniferum HOM05D005515 ORTHO05D006620 2.6e-27 125.6 111 74.8
CsaV3_6G032220 Cucumis sativus L. HOM05D005515 ORTHO05D006620 4.4e-27 124.8 111 69.4
CAN.G1300.5 Capsicum annuum HOM05D005515 ORTHO05D006620 5.8e-27 124.4 111 78.4
Atru.chr11.2315 Acer truncatum HOM05D005515 ORTHO05D006620 7.6e-27 124.0 109 78.0
Mapoly0005s0063 Marchantia polymorpha HOM05D005515 ORTHO05D006620 1.7e-26 122.9 111 73.0
Pp3c4_1860 Physcomitrium patens HOM05D005515 ORTHO05D006620 2.9e-26 122.1 107 75.7
Actinidia05921 Actinidia chinensis HOM05D005515 ORTHO05D006620 6.4e-26 120.9 107 62.6
Migut.K01462 Erythranthe guttata HOM05D005515 ORTHO05D006620 1.4e-25 119.8 111 73.0
ATR1098G146 Amborella trichopoda HOM05D005515 ORTHO05D006620 1.9e-25 119.4 126 69.8
PGR102G1194 Punica granatum HOM05D005515 ORTHO05D006620 1.9e-25 119.4 112 74.1
Pp3c12_14240 Physcomitrium patens HOM05D005515 ORTHO05D006620 4.2e-25 118.2 107 70.1
Sed0013471 Sechium edule HOM05D005515 ORTHO05D006620 7.1e-25 117.5 111 53.2
Manes.12G012000 Manihot esculenta HOM05D005515 ORTHO05D006620 1.2e-24 116.7 113 77.0
MSTRG.15568 Avicennia marina HOM05D005515 ORTHO05D006620 7.8e-24 114.0 114 73.7
Pp3c8_2660 Physcomitrium patens HOM05D005515 ORTHO05D006620 7.8e-24 114.0 109 55.0
AL5G16230 Arabidopsis lyrata HOM05D005515 ORTHO05D006620 1.3e-23 113.2 122 67.2
Duzib268G1731 Durio zibethinus HOM05D005515 ORTHO05D006620 3.9e-23 111.7 114 54.4
Gorai.009G332600 Gossypium raimondii HOM05D005515 ORTHO05D006620 1.1e-22 110.2 113 54.0
CARHR148320 Cardamine hirsuta HOM05D005515 ORTHO05D006620 9.6e-22 107.1 114 62.3
Gohir.A05G310700 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.3e-21 106.7 96 59.4
MSTRG.7999 Avicennia marina HOM05D005515 ORTHO05D006620 4.8e-21 104.8 107 70.1
THA.LOC104823981 Tarenaya hassleriana HOM05D005515 ORTHO05D006620 6.2e-21 104.4 112 67.9
MD00G1139400 Malus domestica HOM05D005515 ORTHO05D006620 4.0e-20 101.7 82 63.4
Cfa009365 Carpinus fangiana HOM05D000048 ORTHO05D000445 5.3e-20 101.3 107 70.1
Nn3g16471 Nelumbo nucifera HOM05D005515 ORTHO05D006620 5.3e-20 101.3 90 82.2
unitig_8.g2909 Utricularia gibba HOM05D005515 ORTHO05D006620 2.6e-19 99.0 113 66.4
PGSC0003DMG401006926 Solanum tuberosum HOM05D005515 ORTHO05D006620 3.4e-19 98.6 87 79.3
FAN14G0031 Fragaria x ananassa HOM05D005515 ORTHO05D006620 4.5e-19 98.2 93 64.5
MELO3C011459.2 Cucumis melo HOM05D005515 ORTHO05D006620 1.3e-18 96.7 83 71.1
SMO367G0376 Selaginella moellendorffii HOM05D005515 ORTHO05D006620 1.3e-18 96.7 89 68.5
Sabra17G0064300 Salix brachista HOM05D005515 ORTHO05D006620 1.7e-18 96.3 124 50.8
Sabra16G0211700 Salix brachista HOM05D005515 ORTHO05D006620 2.2e-18 95.9 208 41.3
RcHm_v2.0_Chr2g0175521 Rosa chinensis HOM05D005515 ORTHO05D006620 2.9e-18 95.5 52 86.5
QL02p071462 Quercus lobata HOM05D005515 ORTHO05D006620 3.8e-18 95.1 51 88.2
Ciclev10033394m.g Citrus clementina HOM05D005515 ORTHO05D006620 4.9e-18 94.7 87 80.5
Haze_12412 Corylus avellana HOM05D000048 ORTHO05D000445 1.1e-17 93.6 113 47.8
vmacro05955 Vaccinium macrocarpon HOM05D005515 ORTHO05D006620 1.1e-17 93.6 50 88.0
Migut.K00729 Erythranthe guttata HOM05D005515 ORTHO05D006620 1.4e-17 93.2 110 44.5
Actinidia36201 Actinidia chinensis HOM05D005515 ORTHO05D006620 2.4e-17 92.4 84 73.8
Cpa.g.sc43.50 Carica papaya HOM05D005515 ORTHO05D006620 5.4e-17 91.3 85 80.0
Sopen02g017220 Solanum pennellii HOM05D005515 ORTHO05D006620 7.1e-17 90.9 88 54.5
Carub.0005s0534 Capsella rubella HOM05D005515 ORTHO05D006620 9.3e-17 90.5 113 66.4
CSS0037273 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 1.2e-16 90.1 50 86.0
HanXRQChr12g0385431 Helianthus annuus HOM05D005515 ORTHO05D006620 2.1e-16 89.4 52 78.8
VMungo1383G1573 Vigna mungo HOM05D005515 ORTHO05D006620 2.7e-16 89.0 51 82.4
AT3G27100 Arabidopsis thaliana HOM05D005515 ORTHO05D006620 1.0e-15 87.0 115 64.3
BolC7t44132H Brassica oleracea HOM05D005515 ORTHO05D006620 6.7e-15 84.3 111 52.3
CDE02G3365 Ceratophyllum demersum HOM05D005515 ORTHO05D006620 8.7e-15 84.0 82 78.0
BcaC04g23917 Brassica carinata HOM05D005515 ORTHO05D006620 1.5e-14 83.2 115 62.6
SGA_v2.0_scaffold154G37170 Striga asiatica HOM05D005515 ORTHO05D006620 1.5e-14 83.2 102 70.6
AagrBONN_evm.TU.Sc2ySwM_117.47 Anthoceros agrestis HOM05D005515 ORTHO05D006620 1.9e-14 82.8 84 48.8
Ah.02g120510 Amaranthus hybridus HOM05D005515 ORTHO05D006620 3.3e-14 82.0 73 56.2
SalBow7G1491 Salvia bowleyana HOM05D005515 ORTHO05D006620 4.3e-14 81.6 120 45.8
BolC9t53269H Brassica oleracea HOM05D005515 ORTHO05D006620 5.6e-14 81.3 114 62.3
A09p03280 Brassica napus HOM05D005515 ORTHO05D006620 1.6e-13 79.7 114 60.5
Thhalv10005161m.g Eutrema salsugineum HOM05D005515 ORTHO05D006620 2.8e-13 79.0 112 58.0
Sp2g16230 Schrenkiella parvula HOM05D005515 ORTHO05D006620 4.8e-13 78.2 113 58.4
SalBow2G3427 Salvia bowleyana HOM05D005515 ORTHO05D006620 6.2e-13 77.8 88 45.5
Aa31LG2G5500 Aethionema arabicum HOM05D005515 ORTHO05D006620 2.4e-12 75.9 114 57.0
Gohir.D05G311500 Gossypium hirsutum HOM05D005515 ORTHO05D006620 2.4e-12 75.9 90 47.8
C09p03480 Brassica napus HOM05D005515 ORTHO05D006620 5.8e-11 71.2 88 44.3
BraA06t27074Z Brassica rapa HOM05D005515 ORTHO05D006620 1.3e-10 70.1 114 54.4
MCO13G114 Micromonas commoda HOM05D005515 ORTHO05D006620 1.9e-09 66.2 93 60.2
A06p41490 Brassica napus HOM05D005515 ORTHO05D006620 3.2e-09 65.5 118 50.8
C07p36160 Brassica napus HOM05D005515 ORTHO05D006620 3.2e-09 65.5 105 56.2
Actinidia30652 Actinidia chinensis HOM05D005515 ORTHO05D006620 2.7e-08 62.4 60 51.7
COL.COLO4_20393 Corchorus olitorius HOM05D005515 ORTHO05D006620 1.0e-07 60.5 57 52.6
BraA09t35966Z Brassica rapa HOM05D005515 ORTHO05D006620 3.9e-07 58.5 90 62.2
Cre08.g370300 Chlamydomonas reinhardtii HOM05D005515 ORTHO05D006620 5.1e-07 58.2 89 32.6
BcaB04g19426 Brassica carinata HOM05D005515 ORTHO05D006620 6.7e-07 57.8 82 54.9
Nn4g22340 Nelumbo nucifera HOM05D001716 ORTHO05D004234 1.5e-06 56.6 60 80.0
Oeu006531.1 Olea europaea HOM05D005515 ORTHO05D006620 1.5e-06 56.6 61 45.9
TWI18G0205 Tripterygium wilfordii HOM05D005515 ORTHO05D006620 3.3e-06 55.5 48 52.1
CSS0003202 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 7.4e-06 54.3 62 46.8
CSS0037049 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 7.4e-06 54.3 62 46.8


User provided reference genes

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