Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.2398 Acer truncatum HOM05D004569 ORTHO05D005333 1.3e-52 209.5 108 100.0
Atru.chr4.2374 Acer truncatum HOM05D004569 ORTHO05D005333 6.2e-44 180.6 94 98.9
Peaxi162Scf00192g01617 Petunia axillaris HOM05D004569 ORTHO05D005333 1.0e-30 136.7 94 70.2
Nitab4.5_0000321g0230 Nicotiana tabacum HOM05D004569 ORTHO05D005333 3.9e-30 134.8 94 70.2
GSVIVG01036653001 Vitis vinifera HOM05D004569 ORTHO05D005333 5.1e-30 134.4 91 73.6
Duzib052G0452 Durio zibethinus HOM05D004569 ORTHO05D005333 1.1e-29 133.3 91 74.7
Dinv07545 Davidia involucrata HOM05D004569 ORTHO05D005333 1.5e-29 132.9 91 73.6
Nitab4.5_0004412g0030 Nicotiana tabacum HOM05D004569 ORTHO05D005333 3.3e-29 131.7 94 69.1
Thecc.04G238000 Theobroma cacao HOM05D004569 ORTHO05D005333 4.3e-29 131.3 91 73.6
AT5G62950 Arabidopsis thaliana HOM05D004569 ORTHO05D005333 5.7e-29 131.0 94 69.1
CiPaw.01G195800 Carya illinoinensis HOM05D004569 ORTHO05D005333 5.7e-29 131.0 94 67.0
CAN.G135.33 Capsicum annuum HOM05D004569 ORTHO05D005333 1.7e-28 129.4 94 69.1
Gohir.A02G034100 Gossypium hirsutum HOM05D004569 ORTHO05D005333 1.7e-28 129.4 91 72.5
Lj6g0017152 Lotus japonicus HOM05D004569 ORTHO05D005333 1.7e-28 129.4 94 68.1
Aa31LG11G680 Aethionema arabicum HOM05D004569 ORTHO05D005333 2.2e-28 129.0 91 71.4
Ciclev10006087m.g Citrus clementina HOM05D004569 ORTHO05D005333 2.2e-28 129.0 94 70.2
VMungo1383G1439 Vigna mungo HOM05D004569 ORTHO05D005333 2.8e-28 128.6 94 67.0
Carub.0004s0755 Capsella rubella HOM05D004569 ORTHO05D005333 4.8e-28 127.9 91 69.2
arahy.Tifrunner.gnm1.ann1.NDW3GA Arachis hypogaea HOM05D004569 ORTHO05D005333 6.3e-28 127.5 94 67.0
arahy.Tifrunner.gnm1.ann1.SFA2KC Arachis hypogaea HOM05D004569 ORTHO05D005333 6.3e-28 127.5 94 67.0
AL3G51140 Arabidopsis lyrata HOM05D004569 ORTHO05D005333 8.2e-28 127.1 94 66.0
AL8G39970 Arabidopsis lyrata HOM05D004569 ORTHO05D005333 8.2e-28 127.1 94 66.0
ClCG06G006470 Citrullus lanatus HOM05D004569 ORTHO05D005333 1.1e-27 126.7 94 67.0
Gohir.D02G040900 Gossypium hirsutum HOM05D004569 ORTHO05D005333 1.1e-27 126.7 91 71.4
Potri.005G067600 Populus trichocarpa HOM05D004569 ORTHO05D005333 1.1e-27 126.7 94 66.0
Carub.0008s2366 Capsella rubella HOM05D004569 ORTHO05D005333 1.4e-27 126.3 91 68.1
TAR365G0299 Trochodendron aralioides HOM05D004569 ORTHO05D005333 1.4e-27 126.3 91 69.2
CARHR276760 Cardamine hirsuta HOM05D004569 ORTHO05D005333 1.8e-27 125.9 91 67.0
Sc19g0003960 Simmondsia chinensis HOM05D004569 ORTHO05D005333 1.8e-27 125.9 94 63.8
THA.LOC104827037 Tarenaya hassleriana HOM05D004569 ORTHO05D005333 1.8e-27 125.9 91 68.1
CSS0011446 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 2.4e-27 125.6 89 66.3
CANSAT78G0168 Cannabis sativa HOM05D004569 ORTHO05D005333 2.4e-27 125.6 94 63.8
Duzib052G0972 Durio zibethinus HOM05D004569 ORTHO05D005333 2.4e-27 125.6 91 70.3
SalBow2G1663 Salvia bowleyana HOM05D004569 ORTHO05D005333 3.1e-27 125.2 92 64.1
CSS0021073 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 4.1e-27 124.8 88 65.9
Cfa006984 Carpinus fangiana HOM05D004569 ORTHO05D005333 4.1e-27 124.8 94 66.0
Gorai.005G045300 Gossypium raimondii HOM05D004569 ORTHO05D005333 4.1e-27 124.8 87 72.4
Phvul.001G230900 Phaseolus vulgaris HOM05D004569 ORTHO05D005333 5.3e-27 124.4 94 66.0
Haze_03750 Corylus avellana HOM05D004569 ORTHO05D005333 6.9e-27 124.0 94 64.9
Lalb_Chr06g0161741 Lupinus albus HOM05D004569 ORTHO05D005333 6.9e-27 124.0 94 63.8
Sabra05G0055500 Salix brachista HOM05D004569 ORTHO05D005333 6.9e-27 124.0 93 67.7
SalBow8G0974 Salvia bowleyana HOM05D004569 ORTHO05D005333 6.9e-27 124.0 92 63.0
Nn1g01867 Nelumbo nucifera HOM05D004569 ORTHO05D005333 9.1e-27 123.6 91 68.1
CsaV3_2G013430 Cucumis sativus L. HOM05D004569 ORTHO05D005333 1.2e-26 123.2 94 64.9
Thhalv10005100m.g Eutrema salsugineum HOM05D004569 ORTHO05D005333 1.2e-26 123.2 94 63.8
Thhalv10000370m.g Eutrema salsugineum HOM05D004569 ORTHO05D005333 1.5e-26 122.9 94 66.0
HanXRQChr05g0158611 Helianthus annuus HOM05D004569 ORTHO05D005333 1.5e-26 122.9 92 63.0
MELO3C014285.2 Cucumis melo HOM05D004569 ORTHO05D005333 4.5e-26 121.3 92 65.2
ECA246G0155 Erigeron canadensis HOM05D004569 ORTHO05D005333 5.9e-26 120.9 91 64.8
Migut.B00535 Erythranthe guttata HOM05D004569 ORTHO05D005333 5.9e-26 120.9 94 60.6
SalBow1G3047 Salvia bowleyana HOM05D004569 ORTHO05D005333 1.0e-25 120.2 93 61.3
Cc03_g04240 Coffea canephora HOM05D004569 ORTHO05D005333 1.3e-25 119.8 94 62.8
Glyma.18G039600 Glycine max HOM05D004569 ORTHO05D005333 1.7e-25 119.4 94 61.7
VMungo1383G2501 Vigna mungo HOM05D004569 ORTHO05D005333 1.7e-25 119.4 94 61.7
Hund09493 Selenicereus undatus HOM05D004569 ORTHO05D005333 2.2e-25 119.0 91 65.9
SGA_v2.0_scaffold45G17132 Striga asiatica HOM05D004044 ORTHO05D005333 2.2e-25 119.0 92 64.1
Glyma.11G217000 Glycine max HOM05D004569 ORTHO05D005333 2.9e-25 118.6 94 60.6
Atru.chr5.182 Acer truncatum HOM05D004569 ORTHO05D005333 3.8e-25 118.2 64 93.8
Peaxi162Scf00904g00217 Petunia axillaris HOM05D004569 ORTHO05D005333 3.8e-25 118.2 92 63.0
Manes.02G208200 Manihot esculenta HOM05D004569 ORTHO05D005333 5.0e-25 117.9 91 64.8
Oeu042815.1 Olea europaea HOM05D004569 ORTHO05D005333 6.5e-25 117.5 91 61.5
TWI63G1720 Tripterygium wilfordii HOM05D004569 ORTHO05D005333 6.5e-25 117.5 94 64.9
Sp2g26090 Schrenkiella parvula HOM05D004569 ORTHO05D005333 8.5e-25 117.1 92 63.0
Sed0021164 Sechium edule HOM05D004569 ORTHO05D005333 1.1e-24 116.7 94 60.6
Aqoxy5G00407 Aquilegia oxysepala HOM05D004569 ORTHO05D005333 1.4e-24 116.3 91 63.7
Rhsim01G0189100 Rhododendron simsii HOM05D004569 ORTHO05D005333 1.4e-24 116.3 91 61.5
BcaB07g29675 Brassica carinata HOM05D004569 ORTHO05D005333 1.9e-24 115.9 89 62.9
Ca_17658_v3 Cicer arietinum L. HOM05D004569 ORTHO05D005333 2.5e-24 115.5 94 57.4
Lj5g0008299 Lotus japonicus HOM05D004569 ORTHO05D005333 2.5e-24 115.5 94 59.6
HanXRQChr06g0173001 Helianthus annuus HOM05D004569 ORTHO05D005333 3.2e-24 115.2 91 63.7
PSO210G1425 Papaver somniferum HOM05D004569 ORTHO05D005333 3.2e-24 115.2 91 60.4
PSO832G4509 Papaver somniferum HOM05D004569 ORTHO05D005333 3.2e-24 115.2 91 60.4
Hma1.2p1_0602F.1_g187570 Hydrangea macrophylla HOM05D004569 ORTHO05D005333 4.2e-24 114.8 87 65.5
Lsat_1_v5_gn_1_12980 Lactuca sativa HOM05D004569 ORTHO05D005333 4.2e-24 114.8 91 61.5
BcaC03g18183 Brassica carinata HOM05D004569 ORTHO05D005333 7.2e-24 114.0 91 62.6
C02p62490 Brassica napus HOM05D004569 ORTHO05D005333 9.4e-24 113.6 90 63.3
BolC2t12308H Brassica oleracea HOM05D004569 ORTHO05D005333 9.4e-24 113.6 90 63.3
A02p42590 Brassica napus HOM05D004569 ORTHO05D005333 1.2e-23 113.2 90 63.3
BraA02t09187Z Brassica rapa HOM05D004569 ORTHO05D005333 1.2e-23 113.2 90 63.3
CSS0049273 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 1.2e-23 113.2 89 62.9
vmacro17995 Vaccinium macrocarpon HOM05D004569 ORTHO05D005333 1.6e-23 112.8 89 57.3
Psat3g163880 Pisum sativum HOM05D004569 ORTHO05D005333 2.1e-23 112.5 94 54.3
Dinv40544 Davidia involucrata HOM05D004569 ORTHO05D005333 4.7e-23 111.3 81 67.9
Medtr6g045613 Medicago truncatula HOM05D004569 ORTHO05D005333 6.1e-23 110.9 92 57.6
Oeu058961.1 Olea europaea HOM05D004569 ORTHO05D005333 6.1e-23 110.9 91 58.2
Psat3g162000 Pisum sativum HOM05D004569 ORTHO05D005333 6.1e-23 110.9 95 54.7
Sopen11g003670 Solanum pennellii HOM05D004569 ORTHO05D005333 7.9e-23 110.5 110 54.5
Aqoxy2G03457 Aquilegia oxysepala HOM05D004569 ORTHO05D005333 1.0e-22 110.2 83 66.3
Medtr7g034585 Medicago truncatula HOM05D004569 ORTHO05D005333 1.0e-22 110.2 94 55.3
AUR62028629 Chenopodium quinoa HOM05D004569 ORTHO05D005333 1.4e-22 109.8 91 61.5
Ah.02g110960 Amaranthus hybridus HOM05D000936 ORTHO05D001411 1.8e-22 109.4 90 60.0
Lsat_1_v5_gn_6_95400 Lactuca sativa HOM05D004569 ORTHO05D005333 1.8e-22 109.4 91 58.2
CDE05G0131 Ceratophyllum demersum HOM05D004569 ORTHO05D005333 2.3e-22 109.0 94 56.4
BcaC01g02544 Brassica carinata HOM05D004569 ORTHO05D005333 5.1e-22 107.8 83 62.7
BcaC08g46303 Brassica carinata HOM05D004569 ORTHO05D005333 5.1e-22 107.8 92 57.6
C03p63650 Brassica napus HOM05D004569 ORTHO05D005333 5.1e-22 107.8 83 62.7
BolC3t18624H Brassica oleracea HOM05D004569 ORTHO05D005333 5.1e-22 107.8 83 62.7
Dinv07599 Davidia involucrata HOM05D004569 ORTHO05D005333 5.1e-22 107.8 75 72.0
BolC6t39293H Brassica oleracea HOM05D004569 ORTHO05D005333 8.8e-22 107.1 92 56.5
MD13G1198900 Malus domestica HOM05D004569 ORTHO05D005333 8.8e-22 107.1 92 56.5
C06p41320 Brassica napus HOM05D004569 ORTHO05D005333 1.5e-21 106.3 91 57.1
Nitab4.5_0004743g0130 Nicotiana tabacum HOM05D004569 ORTHO05D005333 2.0e-21 105.9 94 61.7
SGA_v2.0_scaffold353G49718 Striga asiatica HOM05D004569 ORTHO05D005333 2.0e-21 105.9 94 55.3
BcaC04g23378 Brassica carinata HOM05D004569 ORTHO05D005333 4.4e-21 104.8 91 57.1
Os12g0488800 Oryza sativa ssp. japonica HOM05D004569 ORTHO05D005333 5.7e-21 104.4 95 57.9
Prupe.1G020700 Prunus persica HOM05D004569 ORTHO05D005333 5.7e-21 104.4 87 60.9
PGR031G3247 Punica granatum HOM05D004569 ORTHO05D005333 5.7e-21 104.4 94 56.4
Rhsim04G0197700 Rhododendron simsii HOM05D004569 ORTHO05D005333 9.7e-21 103.6 91 58.2
C09p08990 Brassica napus HOM05D004569 ORTHO05D005333 1.3e-20 103.2 91 57.1
BolC9t53811H Brassica oleracea HOM05D004569 ORTHO05D005333 1.3e-20 103.2 91 57.1
BcaB04g19957 Brassica carinata HOM05D004569 ORTHO05D005333 3.7e-20 101.7 90 58.9
MBI18_g09782_MAGBIO Magnolia biondii HOM05D004569 ORTHO05D005333 3.7e-20 101.7 94 55.3
PGR004G1818 Punica granatum HOM05D004569 ORTHO05D005333 6.3e-20 100.9 94 53.2
unitig_748.g7305 Utricularia gibba HOM05D004569 ORTHO05D005333 1.1e-19 100.1 91 53.8
A09p07940 Brassica napus HOM05D004569 ORTHO05D005333 1.4e-19 99.8 92 57.6
BcaB02g09711 Brassica carinata HOM05D004569 ORTHO05D005333 1.8e-19 99.4 81 60.5
RcHm_v2.0_Chr4g0387641 Rosa chinensis HOM05D004569 ORTHO05D005333 3.1e-19 98.6 94 48.9
RcHm_v2.0_Chr6g0280701 Rosa chinensis HOM05D004569 ORTHO05D005333 3.1e-19 98.6 94 48.9
TPR.G14863 Trifolium pratense HOM05D004569 ORTHO05D005333 3.1e-19 98.6 91 51.6
Zm00001eb076250 Zea mays HOM05D004569 ORTHO05D005333 4.1e-19 98.2 94 55.3
Zm00001eb076270 Zea mays HOM05D004569 ORTHO05D005333 4.1e-19 98.2 94 55.3
Zm00001eb076290 Zea mays HOM05D004569 ORTHO05D005333 4.1e-19 98.2 94 55.3
Zm00001eb310390 Zea mays HOM05D004569 ORTHO05D005333 4.1e-19 98.2 94 55.3
BraA09t36445Z Brassica rapa HOM05D004569 ORTHO05D005333 5.3e-19 97.8 91 58.2
PGSC0003DMG400027326 Solanum tuberosum HOM05D004569 ORTHO05D005333 6.9e-19 97.4 110 50.0
CSS0028808 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 1.2e-18 96.7 67 68.7
BraA06t25922Z Brassica rapa HOM05D004569 ORTHO05D005333 4.5e-18 94.7 83 54.2
FvH4_4g01070 Fragaria vesca HOM05D004569 ORTHO05D005333 2.2e-17 92.4 94 45.7
FAN12G4296 Fragaria x ananassa HOM05D004569 ORTHO05D005333 2.2e-17 92.4 94 45.7
Eucgr.H03416 Eucalyptus grandis HOM05D004569 ORTHO05D005333 3.8e-17 91.7 94 51.1
HPP92_022914 Vanilla planifolia HOM05D004569 ORTHO05D005333 3.8e-17 91.7 112 47.3
Medtr6g045603 Medicago truncatula HOM05D004569 ORTHO05D005333 5.0e-17 91.3 78 57.7
FvH4_5g27570 Fragaria vesca HOM05D004569 ORTHO05D005333 6.5e-17 90.9 94 47.9
ATR0829G086 Amborella trichopoda HOM05D004569 ORTHO05D005333 1.1e-16 90.1 91 50.5
AT3G28956 Arabidopsis thaliana HOM05D004569 ORTHO05D005333 2.5e-16 89.0 69 63.8
AUR62033084 Chenopodium quinoa HOM05D004569 ORTHO05D005333 2.1e-15 85.9 102 45.1
Pp3c21_14050 Physcomitrium patens HOM05D004569 ORTHO05D005333 2.6e-13 79.0 94 41.5
Mapoly0090s0037 Marchantia polymorpha HOM05D004569 ORTHO05D005333 9.7e-13 77.0 94 42.6
Phvul.001G219600 Phaseolus vulgaris HOM05D004569 ORTHO05D005333 2.2e-12 75.9 66 62.1
FAN13G2556 Fragaria x ananassa HOM05D004569 ORTHO05D005333 3.7e-12 75.1 93 44.1
FAN18G3311 Fragaria x ananassa HOM05D004569 ORTHO05D005333 3.5e-10 68.6 94 43.6
SMO343G0078 Selaginella moellendorffii HOM05D004569 ORTHO05D005333 3.5e-10 68.6 95 36.8
SalBow2G3500 Salvia bowleyana HOM05D000011 ORTHO05D000018 4.5e-10 68.2 43 74.4
AagrBONN_evm.TU.Sc2ySwM_228.788 Anthoceros agrestis HOM05D004569 ORTHO05D005333 5.9e-10 67.8 91 40.7
GSVIVG01008529001 Vitis vinifera HOM05D004569 ORTHO05D005333 7.7e-10 67.4 50 68.0
TAR636G3114 Trochodendron aralioides HOM05D004569 ORTHO05D005333 5.0e-09 64.7 49 57.1
Lj6C645G5 Lonicera japonica HOM05D004569 ORTHO05D005333 8.5e-09 63.9 51 60.8
CBR_g19683 Chara braunii HOM05D004569 ORTHO05D005333 1.1e-08 63.5 90 41.1
COL.COLO4_21559 Corchorus olitorius HOM05D004569 ORTHO05D005333 2.5e-08 62.4 60 48.3
SEGI_07191 Sequoiadendron giganteum HOM05D004569 ORTHO05D005333 8.0e-07 57.4 71 42.3
A06p29750 Brassica napus HOM05D004569 ORTHO05D005333 1.0e-06 57.0 46 58.7
vmacro08367 Vaccinium macrocarpon HOM05D004569 ORTHO05D005333 1.8e-06 56.2 40 65.0


User provided reference genes

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