Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr10.2224 Acer truncatum HOM05D006172 ORTHO05D005515 1.8e-125 452.6 229 100.0
Atru.chr10.2219 Acer truncatum HOM05D006172 ORTHO05D005515 1.3e-120 436.4 221 100.0
Ciclev10018338m.g Citrus clementina HOM05D006172 ORTHO05D005515 6.5e-83 311.2 228 71.1
MD10G1321300 Malus domestica HOM05D006172 ORTHO05D005515 3.7e-70 268.9 242 59.9
FAN21G3941 Fragaria x ananassa HOM05D006172 ORTHO05D005515 4.8e-70 268.5 217 65.4
FvH4_3g02080 Fragaria vesca HOM05D006172 ORTHO05D005515 7.0e-69 264.6 222 63.5
FAN25G0496 Fragaria x ananassa HOM05D006172 ORTHO05D005515 7.0e-69 264.6 233 62.2
Duzib192G0085 Durio zibethinus HOM05D006172 ORTHO05D005515 9.1e-69 264.2 230 59.6
Haze_06799 Corylus avellana HOM05D006172 ORTHO05D005515 4.5e-68 261.9 206 61.7
RcHm_v2.0_Chr5g0003171 Rosa chinensis HOM05D006172 ORTHO05D005515 7.7e-68 261.2 220 60.9
PGR042G0524 Punica granatum HOM05D006172 ORTHO05D005515 1.0e-67 260.8 229 58.1
Cpa.g.sc152.15 Carica papaya HOM05D006172 ORTHO05D005515 1.7e-67 260.0 238 60.1
Sc05g0009930 Simmondsia chinensis HOM05D006172 ORTHO05D005515 1.7e-67 260.0 234 57.3
COL.COLO4_31773 Corchorus olitorius HOM05D006172 ORTHO05D005515 2.2e-67 259.6 205 62.9
Actinidia28669 Actinidia chinensis HOM05D006172 ORTHO05D005515 1.1e-66 257.3 227 58.6
Gohir.D05G173300 Gossypium hirsutum HOM05D006172 ORTHO05D005515 1.5e-66 256.9 226 58.4
Gorai.009G178500 Gossypium raimondii HOM05D006172 ORTHO05D005515 1.5e-66 256.9 226 58.4
arahy.Tifrunner.gnm1.ann1.3R4FRS Arachis hypogaea HOM05D006172 ORTHO05D005515 1.9e-66 256.5 225 56.9
Gohir.A05G170200 Gossypium hirsutum HOM05D006172 ORTHO05D005515 1.9e-66 256.5 226 59.3
AT4G04670 Arabidopsis thaliana HOM05D006172 ORTHO05D005515 2.5e-66 256.1 232 58.6
Sc05g0009220 Simmondsia chinensis HOM05D006172 ORTHO05D005515 2.5e-66 256.1 234 57.3
TAR626G1786 Trochodendron aralioides HOM05D006172 ORTHO05D005515 2.5e-66 256.1 203 62.6
AL6G48130 Arabidopsis lyrata HOM05D006172 ORTHO05D005515 4.2e-66 255.4 232 58.2
GSVIVG01012726001 Vitis vinifera HOM05D006172 ORTHO05D005515 4.2e-66 255.4 225 60.0
Sp6g04230 Schrenkiella parvula HOM05D006172 ORTHO05D005515 5.5e-66 255.0 238 58.0
arahy.Tifrunner.gnm1.ann1.GS5NL2 Arachis hypogaea HOM05D006172 ORTHO05D005515 7.2e-66 254.6 225 56.4
CANSAT56G2229 Cannabis sativa HOM05D006172 ORTHO05D005515 9.4e-66 254.2 237 58.6
Rhsim13G0154200 Rhododendron simsii HOM05D006172 ORTHO05D005515 1.6e-65 253.4 211 62.6
THA.LOC104813121 Tarenaya hassleriana HOM05D006172 ORTHO05D005515 1.6e-65 253.4 241 58.5
Thhalv10028391m.g Eutrema salsugineum HOM05D006172 ORTHO05D005515 2.1e-65 253.1 232 58.2
Hund21409 Selenicereus undatus HOM05D006172 ORTHO05D005515 2.1e-65 253.1 215 58.6
CSS0050420 Camellia sinensis var. sinensis HOM05D006172 ORTHO05D005515 4.7e-65 251.9 226 58.4
Carub.0006s3250 Capsella rubella HOM05D006172 ORTHO05D005515 4.7e-65 251.9 238 56.7
TWI38G1682 Tripterygium wilfordii HOM05D006172 ORTHO05D005515 4.7e-65 251.9 231 56.7
A03p30170 Brassica napus HOM05D006172 ORTHO05D005515 1.0e-64 250.8 235 58.7
BraA03t12201Z Brassica rapa HOM05D006172 ORTHO05D005515 1.0e-64 250.8 235 58.7
CARHR252880 Cardamine hirsuta HOM05D006172 ORTHO05D005515 1.0e-64 250.8 242 55.4
Potri.004G015200 Populus trichocarpa HOM05D006172 ORTHO05D005515 1.0e-64 250.8 257 55.6
Sabra04G0007400 Salix brachista HOM05D006172 ORTHO05D005515 1.0e-64 250.8 261 55.2
CSS0038964 Camellia sinensis var. sinensis HOM05D006172 ORTHO05D005515 1.4e-64 250.4 226 58.4
C03p36400 Brassica napus HOM05D006172 ORTHO05D005515 1.8e-64 250.0 239 57.3
BolC3t15953H Brassica oleracea HOM05D006172 ORTHO05D005515 1.8e-64 250.0 239 57.3
Aqoxy1G02151 Aquilegia oxysepala HOM05D006172 ORTHO05D005515 2.3e-64 249.6 209 58.4
ECA236G0092 Erigeron canadensis HOM05D006172 ORTHO05D005515 4.0e-64 248.8 241 53.9
Aa31LG9G9740 Aethionema arabicum HOM05D006172 ORTHO05D005515 5.2e-64 248.4 244 54.5
HanXRQChr05g0129541 Helianthus annuus HOM05D006172 ORTHO05D005515 6.8e-64 248.1 217 59.4
HanXRQChr05g0129551 Helianthus annuus HOM05D006172 ORTHO05D005515 6.8e-64 248.1 217 59.4
Nn1g07129 Nelumbo nucifera HOM05D006172 ORTHO05D005515 6.8e-64 248.1 235 53.6
VMungo1215G3219 Vigna mungo HOM05D006172 ORTHO05D005515 6.8e-64 248.1 211 58.8
vmacro03686 Vaccinium macrocarpon HOM05D006172 ORTHO05D005515 8.8e-64 247.7 209 60.3
Glyma.07G260400 Glycine max HOM05D006172 ORTHO05D005515 1.5e-63 246.9 230 54.3
Ah.09g234910 Amaranthus hybridus HOM05D006172 ORTHO05D005515 2.0e-63 246.5 207 59.9
PSO675G8381 Papaver somniferum HOM05D006172 ORTHO05D005515 2.0e-63 246.5 207 61.4
Cc09_g01690 Coffea canephora HOM05D006172 ORTHO05D005515 2.6e-63 246.1 216 58.3
QL05p073195 Quercus lobata HOM05D006172 ORTHO05D005515 2.6e-63 246.1 210 61.0
Peaxi162Scf00627g00035 Petunia axillaris HOM05D006172 ORTHO05D005515 3.4e-63 245.7 241 55.2
Lalb_Chr13g0304211 Lupinus albus HOM05D006172 ORTHO05D005515 4.4e-63 245.4 205 61.0
BcaB01g02576 Brassica carinata HOM05D006172 ORTHO05D005515 1.3e-62 243.8 227 59.9
Lj1A1230T62 Lonicera japonica HOM05D006172 ORTHO05D005515 1.7e-62 243.4 211 58.3
Sopen05g034060 Solanum pennellii HOM05D006172 ORTHO05D005515 1.7e-62 243.4 232 55.6
CAN.G694.35 Capsicum annuum HOM05D006172 ORTHO05D005515 2.2e-62 243.0 233 54.5
MELO3C007389.2 Cucumis melo HOM05D006172 ORTHO05D005515 2.2e-62 243.0 208 58.2
EL10Ac8g20057 Beta vulgaris HOM05D006172 ORTHO05D005515 2.8e-62 242.7 213 58.2
AUR62021945 Chenopodium quinoa HOM05D006172 ORTHO05D005515 2.8e-62 242.7 231 54.5
Nitab4.5_0006322g0020 Nicotiana tabacum HOM05D006172 ORTHO05D005515 2.8e-62 242.7 228 57.0
SHI02199 Sapria himalayana HOM05D006172 ORTHO05D005515 3.7e-62 242.3 202 61.4
ClCG01G022000 Citrullus lanatus HOM05D006172 ORTHO05D005515 8.3e-62 241.1 237 52.7
DCAR_028182 Daucus carota HOM05D006172 ORTHO05D005515 8.3e-62 241.1 205 61.5
Solyc05g055610.4 Solanum lycopersicum HOM05D006172 ORTHO05D005515 8.3e-62 241.1 232 56.0
Lj4g0023330 Lotus japonicus HOM05D006172 ORTHO05D005515 1.1e-61 240.7 208 57.2
CAN.G694.33 Capsicum annuum HOM05D006172 ORTHO05D005515 1.4e-61 240.4 216 56.5
Lsat_1_v5_gn_7_15980 Lactuca sativa HOM05D006172 ORTHO05D005515 2.4e-61 239.6 211 57.3
Nitab4.5_0000096g0040 Nicotiana tabacum HOM05D006172 ORTHO05D005515 2.4e-61 239.6 234 56.0
Eucgr.E04055 Eucalyptus grandis HOM05D006172 ORTHO05D005515 1.6e-60 236.9 229 56.3
Sed0002789 Sechium edule HOM05D006172 ORTHO05D005515 1.6e-60 236.9 210 57.6
Medtr4g132120 Medicago truncatula HOM05D006172 ORTHO05D005515 5.9e-60 235.0 207 56.5
SGA_v2.0_scaffold4G01916 Striga asiatica HOM05D006172 ORTHO05D005515 7.7e-60 234.6 238 52.1
Psat4g006680 Pisum sativum HOM05D006172 ORTHO05D005515 1.0e-59 234.2 209 54.5
Migut.M01317 Erythranthe guttata HOM05D006172 ORTHO05D005515 6.5e-59 231.5 233 51.5
Ca_21083_v3 Cicer arietinum L. HOM05D006172 ORTHO05D005515 1.5e-58 230.3 206 54.9
Oeu013635.1 Olea europaea HOM05D006172 ORTHO05D005515 1.5e-58 230.3 241 50.6
Oeu013636.1 Olea europaea HOM05D006172 ORTHO05D005515 1.5e-58 230.3 241 50.6
AUR62012709 Chenopodium quinoa HOM05D006172 ORTHO05D005515 4.2e-58 228.8 212 54.7
ATR0794G123 Amborella trichopoda HOM05D006172 ORTHO05D005515 3.4e-55 219.2 202 54.5
SEGI_01208 Sequoiadendron giganteum HOM05D006172 ORTHO05D005515 3.6e-49 199.1 203 49.3
SMO139G0125 Selaginella moellendorffii HOM05D006172 ORTHO05D005515 5.7e-47 191.8 235 41.7
Pp3c9_15020 Physcomitrium patens HOM05D006172 ORTHO05D005515 1.7e-46 190.3 204 50.0
AagrBONN_evm.TU.Sc2ySwM_362.1355 Anthoceros agrestis HOM05D006172 ORTHO05D005515 1.6e-44 183.7 216 45.8
Mapoly0137s0034 Marchantia polymorpha HOM05D006172 ORTHO05D005515 3.5e-44 182.6 209 44.5
CBR_g49836 Chara braunii HOM05D006172 ORTHO05D004693 3.4e-39 166.0 180 45.0
QL03p014007 Quercus lobata HOM05D001565 ORTHO05D005515 1.1e-37 161.0 230 43.5
HPP92_012400 Vanilla planifolia HOM05D006172 ORTHO05D005515 4.1e-37 159.1 207 45.4
MCO05G475 Micromonas commoda HOM05D006172 ORTHO05D005515 5.4e-37 158.7 212 42.0
CDE11G0148 Ceratophyllum demersum HOM05D006172 ORTHO05D005515 9.2e-37 157.9 157 56.1
Cre14.g626634 Chlamydomonas reinhardtii HOM05D006172 ORTHO05D005515 1.6e-36 157.1 207 43.0
PRCOL_00000475 Prasinoderma coloniale HOM05D006172 ORTHO05D005515 1.9e-34 150.2 189 43.4
HPP92_012316 Vanilla planifolia HOM05D006172 ORTHO05D005515 2.2e-30 136.7 193 44.0
unitig_37.g12155 Utricularia gibba HOM05D006172 ORTHO05D005515 1.6e-20 104.0 94 53.2
unitig_37.g12154 Utricularia gibba HOM05D006172 ORTHO05D005515 2.1e-17 93.6 75 60.0
Cfa027274 Carpinus fangiana HOM05D006172 ORTHO05D005515 3.6e-17 92.8 243 31.3
Zm00001eb322630 Zea mays HOM05D006172 ORTHO05D005515 2.5e-10 70.1 75 44.0


User provided reference genes

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